RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 Q6ZSV7 163 aa13.48□□□□□ -0.25
CHRNA3-206ENST00000559658 RPP25LQ8N5L8 163 aaKnown RBP13.48□□□□□ -0.25
CHRNA3-206ENST00000559658 SERTAD4Q9NUC0 356 aa13.48□□□□□ -0.25
CHRNA3-206ENST00000559658 SETD2Q9BYW2 2564 aaPredicted RBP13.47□□□□□ -0.25
CHRNA3-206ENST00000559658 TCRBV4S1A1TA0A5B7 111 aa13.47□□□□□ -0.25
CHRNA3-206ENST00000559658 OR2T8A6NH00 312 aa13.47□□□□□ -0.25
CHRNA3-206ENST00000559658 C17orf112F2Z3M2 114 aa13.47□□□□□ -0.25
CHRNA3-206ENST00000559658 HMGB3O15347 200 aaKnown RBP13.47□□□□□ -0.25
CHRNA3-206ENST00000559658 IGLV1-40P01703 118 aa13.47□□□□□ -0.25
CHRNA3-206ENST00000559658 TRGV3P03979 118 aa13.47□□□□□ -0.25
CHRNA3-206ENST00000559658 HILS1P60008 231 aa13.47□□□□□ -0.25
CHRNA3-206ENST00000559658 Q8N2B8 174 aa13.47□□□□□ -0.25
CHRNA3-206ENST00000559658 ZNF414Q96IQ9 312 aa13.47□□□□□ -0.25
CHRNA3-206ENST00000559658 SLC25A22Q9H936 323 aa13.47□□□□□ -0.25
CHRNA3-206ENST00000559658 SLC39A9Q9NUM3 307 aa13.47□□□□□ -0.25
CHRNA3-206ENST00000559658 C21orf62Q9NYP8 219 aa13.47□□□□□ -0.25
CHRNA3-206ENST00000559658 CLN5O75503 358 aa13.46□□□□□ -0.25
CHRNA3-206ENST00000559658 PF4V1P10720 104 aa13.46□□□□□ -0.25
CHRNA3-206ENST00000559658 TPPP2P59282 170 aa13.46□□□□□ -0.25
CHRNA3-206ENST00000559658 RAB14P61106 215 aa13.46□□□□□ -0.25
CHRNA3-206ENST00000559658 SERF2P84101 59 aa13.46□□□□□ -0.25
CHRNA3-206ENST00000559658 TMEM41BQ5BJD5 291 aa13.46□□□□□ -0.25
CHRNA3-206ENST00000559658 NECAP1Q8NC96 275 aa13.46□□□□□ -0.25
CHRNA3-206ENST00000559658 RCC1LQ96I51 464 aaKnown RBP13.46□□□□□ -0.25
CHRNA3-206ENST00000559658 RPL29P47914 159 aaKnown RBP13.46□□□□□ -0.26
CHRNA3-206ENST00000559658 SPATA31B1PQ5VZV4 182 aa13.46□□□□□ -0.26
CHRNA3-206ENST00000559658 ZNF502Q8TBZ5 544 aa13.46□□□□□ -0.26
CHRNA3-206ENST00000559658 DOK5Q9P104 306 aa13.46□□□□□ -0.26
CHRNA3-206ENST00000559658 NIPBLQ6KC79 2804 aaeCLIP13.45□□□□□ -0.26
CHRNA3-206ENST00000559658 CLDN34H7C241 214 aa13.45□□□□□ -0.26
CHRNA3-206ENST00000559658 TSPAN15O95858 294 aa13.45□□□□□ -0.26
CHRNA3-206ENST00000559658 RNASE1P07998 156 aaKnown RBP13.45□□□□□ -0.26
CHRNA3-206ENST00000559658 HIST1H1BP16401 226 aaKnown RBP13.45□□□□□ -0.26
CHRNA3-206ENST00000559658 GPR183P32249 361 aa13.45□□□□□ -0.26
CHRNA3-206ENST00000559658 Q56UQ5 140 aa13.45□□□□□ -0.26
CHRNA3-206ENST00000559658 FAM122CQ6P4D5 195 aa13.45□□□□□ -0.26
CHRNA3-206ENST00000559658 OR10G4Q8NGN3 311 aa13.45□□□□□ -0.26
CHRNA3-206ENST00000559658 OR10G9Q8NGN4 311 aa13.45□□□□□ -0.26
CHRNA3-206ENST00000559658 OR10G7Q8NGN6 311 aa13.45□□□□□ -0.26
CHRNA3-206ENST00000559658 ZNF418Q8TF45 676 aaPredicted RBP13.45□□□□□ -0.26
CHRNA3-206ENST00000559658 CHRDL1Q9BU40 450 aa13.45□□□□□ -0.26
CHRNA3-206ENST00000559658 HRH4Q9H3N8 390 aa13.45□□□□□ -0.26
CHRNA3-206ENST00000559658 THYN1Q9P016 225 aa13.45□□□□□ -0.26
CHRNA3-206ENST00000559658 ZNF580Q9UK33 172 aa13.45□□□□□ -0.26
CHRNA3-206ENST00000559658 IGHV3-35A0A0C4DH35 117 aa13.44□□□□□ -0.26
CHRNA3-206ENST00000559658 UMAD1C9J7I0 102 aa13.44□□□□□ -0.26
CHRNA3-206ENST00000559658 TRBV12-3P01733 135 aa13.44□□□□□ -0.26
CHRNA3-206ENST00000559658 IGHV3-11P01762 117 aa13.44□□□□□ -0.26
CHRNA3-206ENST00000559658 ADMP35318 185 aa13.44□□□□□ -0.26
CHRNA3-206ENST00000559658 TRGV9Q99603 122 aa13.44□□□□□ -0.26
CHRNA3-206ENST00000559658 PSMB11A5LHX3 300 aa13.44□□□□□ -0.26
CHRNA3-206ENST00000559658 GNG7O60262 68 aa13.44□□□□□ -0.26
CHRNA3-206ENST00000559658 PSMB8P28062 276 aa13.44□□□□□ -0.26
CHRNA3-206ENST00000559658 FGF8P55075 233 aaPredicted RBP13.44□□□□□ -0.26
CHRNA3-206ENST00000559658 MFAP4P55083 255 aa13.44□□□□□ -0.26
CHRNA3-206ENST00000559658 CCL20P78556 96 aa13.44□□□□□ -0.26
CHRNA3-206ENST00000559658 RAB31Q13636 194 aa13.44□□□□□ -0.26
CHRNA3-206ENST00000559658 MORN5Q5VZ52 161 aa13.44□□□□□ -0.26
CHRNA3-206ENST00000559658 TMEM37Q8WXS4 190 aa13.44□□□□□ -0.26
CHRNA3-206ENST00000559658 SEPSECSQ9HD40 501 aaKnown RBP13.44□□□□□ -0.26
CHRNA3-206ENST00000559658 PPP5D1E7EU14 171 aa13.43□□□□□ -0.26
CHRNA3-206ENST00000559658 CYB5BO43169 146 aa13.43□□□□□ -0.26
CHRNA3-206ENST00000559658 IGHG4P01861 327 aa13.43□□□□□ -0.26
CHRNA3-206ENST00000559658 PSG1P11464 419 aa13.43□□□□□ -0.26
CHRNA3-206ENST00000559658 M6PRP20645 277 aa13.43□□□□□ -0.26
CHRNA3-206ENST00000559658 RAB5CP51148 216 aa13.43□□□□□ -0.26
CHRNA3-206ENST00000559658 SCGB2A2Q13296 93 aa13.43□□□□□ -0.26
CHRNA3-206ENST00000559658 SPSB3Q6PJ21 355 aa13.43□□□□□ -0.26
CHRNA3-206ENST00000559658 LCN15Q6UWW0 184 aa13.43□□□□□ -0.26
CHRNA3-206ENST00000559658 CLEC19AQ6UXS0 136 aa13.43□□□□□ -0.26
CHRNA3-206ENST00000559658 VN1R17PQ8TDU5 208 aa13.43□□□□□ -0.26
CHRNA3-206ENST00000559658 SAT2Q96F10 170 aaPredicted RBP13.43□□□□□ -0.26
CHRNA3-206ENST00000559658 UHRF2Q96PU4 802 aa13.43□□□□□ -0.26
CHRNA3-206ENST00000559658 IGHV3OR16-8A0A075B7F1 116 aa13.42□□□□□ -0.26
CHRNA3-206ENST00000559658 CRLF1O75462 422 aa13.42□□□□□ -0.26
CHRNA3-206ENST00000559658 CTSGP08311 255 aa13.42□□□□□ -0.26
CHRNA3-206ENST00000559658 RAB9AP51151 201 aa13.42□□□□□ -0.26
CHRNA3-206ENST00000559658 PATE2Q6UY27 113 aa13.42□□□□□ -0.26
CHRNA3-206ENST00000559658 LINC00862A6NCI5 91 aa13.42□□□□□ -0.26
CHRNA3-206ENST00000559658 RPLP1P05386 114 aaKnown RBP13.42□□□□□ -0.26
CHRNA3-206ENST00000559658 NPBWR1P48145 328 aa13.42□□□□□ -0.26
CHRNA3-206ENST00000559658 ATP5G2Q06055 141 aa13.42□□□□□ -0.26
CHRNA3-206ENST00000559658 KIAA0141Q14154 515 aaPredicted RBP13.42□□□□□ -0.26
CHRNA3-206ENST00000559658 COMMD7Q86VX2 200 aa13.42□□□□□ -0.26
CHRNA3-206ENST00000559658 OR5B12Q96R08 314 aa13.42□□□□□ -0.26
CHRNA3-206ENST00000559658 FAM223BA6NKX1 122 aa13.41□□□□□ -0.26
CHRNA3-206ENST00000559658 CLEC3BP05452 202 aa13.41□□□□□ -0.26
CHRNA3-206ENST00000559658 ACOT6Q3I5F7 207 aaPredicted RBP13.41□□□□□ -0.26
CHRNA3-206ENST00000559658 FAM223AQ8IWN6 122 aa13.41□□□□□ -0.26
CHRNA3-206ENST00000559658 LYPD6BQ8NI32 183 aa13.41□□□□□ -0.26
CHRNA3-206ENST00000559658 SFT2D1Q8WV19 159 aa13.41□□□□□ -0.26
CHRNA3-206ENST00000559658 RAB24Q969Q5 203 aa13.41□□□□□ -0.26
CHRNA3-206ENST00000559658 EEF1AKMT3Q96AZ1 226 aa13.41□□□□□ -0.26
CHRNA3-206ENST00000559658 H3BUA1 57 aa13.4□□□□□ -0.26
CHRNA3-206ENST00000559658 H2AFB1P0C5Y9 115 aa13.4□□□□□ -0.26
CHRNA3-206ENST00000559658 CDC34P49427 236 aaPredicted RBP13.4□□□□□ -0.26
CHRNA3-206ENST00000559658 MIR17HGQ75NE6 70 aa13.4□□□□□ -0.26
CHRNA3-206ENST00000559658 LRRC20Q8TCA0 184 aa13.4□□□□□ -0.26
CHRNA3-206ENST00000559658 KCNIP2Q9NS61 270 aa13.4□□□□□ -0.26
CHRNA3-206ENST00000559658 C2CD3Q4AC94 2353 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms