RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 TGFBR1P36897 503 aa11.63□□□□□ -0.55
CDC42BPB-205ENST00000559245 ETV6P41212 452 aa11.63□□□□□ -0.55
CDC42BPB-205ENST00000559245 AKR1C2P52895 323 aa11.63□□□□□ -0.55
CDC42BPB-205ENST00000559245 NUTF2P61970 127 aaKnown RBP11.63□□□□□ -0.55
CDC42BPB-205ENST00000559245 C16orf54Q6UWD8 224 aa11.63□□□□□ -0.55
CDC42BPB-205ENST00000559245 ZNF575Q86XF7 245 aa11.63□□□□□ -0.55
CDC42BPB-205ENST00000559245 UBE2DNLQ8IWF7 75 aa11.63□□□□□ -0.55
CDC42BPB-205ENST00000559245 GLMPQ8WWB7 406 aa11.63□□□□□ -0.55
CDC42BPB-205ENST00000559245 CCDC59Q9P031 241 aaKnown RBP11.63□□□□□ -0.55
CDC42BPB-205ENST00000559245 TRAV30A0A087WSZ9 112 aa11.62□□□□□ -0.55
CDC42BPB-205ENST00000559245 IFNA21P01568 189 aa11.62□□□□□ -0.55
CDC42BPB-205ENST00000559245 CD74P04233 296 aa11.62□□□□□ -0.55
CDC42BPB-205ENST00000559245 AP2S1P53680 142 aaPredicted RBP11.62□□□□□ -0.55
CDC42BPB-205ENST00000559245 Q6ZR54 194 aa11.62□□□□□ -0.55
CDC42BPB-205ENST00000559245 ENY2Q9NPA8 101 aa11.62□□□□□ -0.55
CDC42BPB-205ENST00000559245 HSPG2P98160 4391 aa11.61□□□□□ -0.55
CDC42BPB-205ENST00000559245 FAM90A26D6RGX4 464 aa11.61□□□□□ -0.55
CDC42BPB-205ENST00000559245 H3BMM0 161 aa11.61□□□□□ -0.55
CDC42BPB-205ENST00000559245 HNRNPCP07910 306 aaKnown RBP eCLIP11.61□□□□□ -0.55
CDC42BPB-205ENST00000559245 SPART-AS1P0CW21 52 aa11.61□□□□□ -0.55
CDC42BPB-205ENST00000559245 RPS19P39019 145 aaKnown RBP11.61□□□□□ -0.55
CDC42BPB-205ENST00000559245 RND3P61587 244 aa11.61□□□□□ -0.55
CDC42BPB-205ENST00000559245 LSM3P62310 102 aaKnown RBP11.61□□□□□ -0.55
CDC42BPB-205ENST00000559245 SNRPD3P62318 126 aaKnown RBP11.61□□□□□ -0.55
CDC42BPB-205ENST00000559245 Q6ZRM9 215 aa11.61□□□□□ -0.55
CDC42BPB-205ENST00000559245 TP53RKQ96S44 253 aa11.61□□□□□ -0.55
CDC42BPB-205ENST00000559245 NEU1Q99519 415 aa11.61□□□□□ -0.55
CDC42BPB-205ENST00000559245 ATG12O94817 140 aa11.6□□□□□ -0.55
CDC42BPB-205ENST00000559245 PGAM2P15259 253 aa11.6□□□□□ -0.55
CDC42BPB-205ENST00000559245 PI3P19957 117 aa11.6□□□□□ -0.55
CDC42BPB-205ENST00000559245 EMP1P54849 157 aa11.6□□□□□ -0.55
CDC42BPB-205ENST00000559245 BSXQ3C1V8 233 aa11.6□□□□□ -0.55
CDC42BPB-205ENST00000559245 ZNF705AQ6ZN79 300 aaPredicted RBP11.6□□□□□ -0.55
CDC42BPB-205ENST00000559245 OR1S2Q8NGQ3 325 aa11.6□□□□□ -0.55
CDC42BPB-205ENST00000559245 Q8WTZ3 238 aa11.6□□□□□ -0.55
CDC42BPB-205ENST00000559245 SLIRPQ9GZT3 109 aaKnown RBP11.6□□□□□ -0.55
CDC42BPB-205ENST00000559245 SCPEP1Q9HB40 452 aa11.6□□□□□ -0.55
CDC42BPB-205ENST00000559245 SEPSECSQ9HD40 501 aaKnown RBP11.6□□□□□ -0.55
CDC42BPB-205ENST00000559245 TMEM189A5PLL7 270 aa11.59□□□□□ -0.55
CDC42BPB-205ENST00000559245 CCDC160A6NGH7 325 aa11.59□□□□□ -0.55
CDC42BPB-205ENST00000559245 IGLC1P0CG04 106 aa11.59□□□□□ -0.55
CDC42BPB-205ENST00000559245 RCVRNP35243 200 aa11.59□□□□□ -0.55
CDC42BPB-205ENST00000559245 PIGPP57054 158 aa11.59□□□□□ -0.55
CDC42BPB-205ENST00000559245 CNPY1Q3B7I2 92 aa11.59□□□□□ -0.55
CDC42BPB-205ENST00000559245 SOHLH1Q5JUK2 328 aa11.59□□□□□ -0.55
CDC42BPB-205ENST00000559245 SNX29P2Q8IUI4 249 aa11.59□□□□□ -0.55
CDC42BPB-205ENST00000559245 ZNF486Q96H40 463 aaPredicted RBP11.59□□□□□ -0.55
CDC42BPB-205ENST00000559245 FAM210BQ96KR6 192 aa11.59□□□□□ -0.55
CDC42BPB-205ENST00000559245 NRN1Q9NPD7 142 aa11.59□□□□□ -0.55
CDC42BPB-205ENST00000559245 PTTG2Q9NZH5 202 aa11.59□□□□□ -0.55
CDC42BPB-205ENST00000559245 A0A0G2JRQ6 117 aa11.58□□□□□ -0.56
CDC42BPB-205ENST00000559245 RPS10-NUDT3A0A1W2PQS6 291 aa11.58□□□□□ -0.56
CDC42BPB-205ENST00000559245 ZNF705FA8MVS1 300 aaPredicted RBP11.58□□□□□ -0.56
CDC42BPB-205ENST00000559245 M0QYG6 137 aa11.58□□□□□ -0.56
CDC42BPB-205ENST00000559245 ZNF705DP0CH99 300 aaPredicted RBP11.58□□□□□ -0.56
CDC42BPB-205ENST00000559245 ZNF705BP0CI00 300 aaPredicted RBP11.58□□□□□ -0.56
CDC42BPB-205ENST00000559245 HLA-DRB4P13762 266 aa11.58□□□□□ -0.56
CDC42BPB-205ENST00000559245 DHODHQ02127 395 aa11.58□□□□□ -0.56
CDC42BPB-205ENST00000559245 TRIM16LQ309B1 348 aa11.58□□□□□ -0.56
CDC42BPB-205ENST00000559245 PRSS54Q6PEW0 395 aa11.58□□□□□ -0.56
CDC42BPB-205ENST00000559245 HLA-DRB4X5D2U9 266 aa11.58□□□□□ -0.56
CDC42BPB-205ENST00000559245 IGHV3OR16-12A0A075B7B8 117 aa11.57□□□□□ -0.56
CDC42BPB-205ENST00000559245 C3orf85A0A1B0GTC6 90 aa11.57□□□□□ -0.56
CDC42BPB-205ENST00000559245 SMIM9A6NGZ8 99 aa11.57□□□□□ -0.56
CDC42BPB-205ENST00000559245 IL4P05112 153 aa11.57□□□□□ -0.56
CDC42BPB-205ENST00000559245 ZNF182P17025 639 aaPredicted RBP11.57□□□□□ -0.56
CDC42BPB-205ENST00000559245 OR10J1P30954 320 aa11.57□□□□□ -0.56
CDC42BPB-205ENST00000559245 RND2P52198 227 aa11.57□□□□□ -0.56
CDC42BPB-205ENST00000559245 YPEL3P61236 119 aaPredicted RBP11.57□□□□□ -0.56
CDC42BPB-205ENST00000559245 USF2Q15853 346 aaPredicted RBP11.57□□□□□ -0.56
CDC42BPB-205ENST00000559245 SP6Q3SY56 376 aa11.57□□□□□ -0.56
CDC42BPB-205ENST00000559245 RNF212Q495C1 297 aa11.57□□□□□ -0.56
CDC42BPB-205ENST00000559245 SIGLEC15Q6ZMC9 328 aa11.57□□□□□ -0.56
CDC42BPB-205ENST00000559245 LINC00299Q6ZSB3 139 aa11.57□□□□□ -0.56
CDC42BPB-205ENST00000559245 RRNAD1Q96FB5 475 aaKnown RBP11.57□□□□□ -0.56
CDC42BPB-205ENST00000559245 DKK2Q9UBU2 259 aa11.57□□□□□ -0.56
CDC42BPB-205ENST00000559245 BUB3O43684 328 aa11.56□□□□□ -0.56
CDC42BPB-205ENST00000559245 IGKV3-20P01619 116 aa11.56□□□□□ -0.56
CDC42BPB-205ENST00000559245 SLC25A4P12235 298 aa11.56□□□□□ -0.56
CDC42BPB-205ENST00000559245 HTR2BP41595 481 aa11.56□□□□□ -0.56
CDC42BPB-205ENST00000559245 NKX2-1P43699 371 aaPredicted RBP11.56□□□□□ -0.56
CDC42BPB-205ENST00000559245 RORCP51449 518 aa11.56□□□□□ -0.56
CDC42BPB-205ENST00000559245 FXYD7P58549 80 aa11.56□□□□□ -0.56
CDC42BPB-205ENST00000559245 SPCS3P61009 180 aa11.56□□□□□ -0.56
CDC42BPB-205ENST00000559245 C1orf134Q5TEV5 83 aa11.56□□□□□ -0.56
CDC42BPB-205ENST00000559245 GDF5OSQ5U4N7 250 aa11.56□□□□□ -0.56
CDC42BPB-205ENST00000559245 LHFPL1Q86WI0 220 aa11.56□□□□□ -0.56
CDC42BPB-205ENST00000559245 RNASE11Q8TAA1 199 aaKnown RBP11.56□□□□□ -0.56
CDC42BPB-205ENST00000559245 NIPSNAP3BQ9BS92 247 aa11.56□□□□□ -0.56
CDC42BPB-205ENST00000559245 PLA2G2EQ9NZK7 142 aa11.56□□□□□ -0.56
CDC42BPB-205ENST00000559245 COMMD3Q9UBI1 195 aa11.56□□□□□ -0.56
CDC42BPB-205ENST00000559245 RFNGQ9Y644 331 aa11.56□□□□□ -0.56
CDC42BPB-205ENST00000559245 TEX48A0A1B0GUV7 120 aa11.55□□□□□ -0.56
CDC42BPB-205ENST00000559245 APOA1P02647 267 aa11.55□□□□□ -0.56
CDC42BPB-205ENST00000559245 FAM222AQ5U5X8 452 aa11.55□□□□□ -0.56
CDC42BPB-205ENST00000559245 HEYLQ9NQ87 328 aaPredicted RBP11.55□□□□□ -0.56
CDC42BPB-205ENST00000559245 COPZ2Q9P299 210 aa11.55□□□□□ -0.56
CDC42BPB-205ENST00000559245 GSTZ1O43708 216 aaPredicted RBP11.54□□□□□ -0.56
CDC42BPB-205ENST00000559245 HTN3P15516 51 aa11.54□□□□□ -0.56
CDC42BPB-205ENST00000559245 UCP1P25874 307 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms