RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 STOML2Q9UJZ1 356 aa4.5□□□□□ -1.69
CASC4-208ENST00000559151 ERGIC3Q9Y282 383 aa4.5□□□□□ -1.69
CASC4-208ENST00000559151 RTL1A6NKG5 1358 aa4.5□□□□□ -1.69
CASC4-208ENST00000559151 PKD1L2Q7Z442 2459 aa4.49□□□□□ -1.69
CASC4-208ENST00000559151 TTC28Q96AY4 2481 aa4.49□□□□□ -1.69
CASC4-208ENST00000559151 TMSB15BA0A087X1C1 80 aa4.49□□□□□ -1.69
CASC4-208ENST00000559151 TMEM238C9JI98 176 aa4.49□□□□□ -1.69
CASC4-208ENST00000559151 RPS17P08708 135 aaKnown RBP4.49□□□□□ -1.69
CASC4-208ENST00000559151 IFI30P13284 250 aa4.49□□□□□ -1.69
CASC4-208ENST00000559151 OR1L8Q8NGR8 309 aa4.49□□□□□ -1.69
CASC4-208ENST00000559151 ROPN1LQ96C74 230 aa4.49□□□□□ -1.69
CASC4-208ENST00000559151 TIMM21Q9BVV7 248 aa4.49□□□□□ -1.69
CASC4-208ENST00000559151 ICE1Q9Y2F5 2266 aa4.49□□□□□ -1.69
CASC4-208ENST00000559151 SMG6Q86US8 1419 aaKnown RBP4.48□□□□□ -1.69
CASC4-208ENST00000559151 BCORQ6W2J9 1755 aa4.48□□□□□ -1.69
CASC4-208ENST00000559151 PLXNA3P51805 1871 aa4.48□□□□□ -1.69
CASC4-208ENST00000559151 IGLV3-9A0A075B6K5 115 aa4.48□□□□□ -1.69
CASC4-208ENST00000559151 A0A0J9YW62 118 aa4.48□□□□□ -1.69
CASC4-208ENST00000559151 A0A1B0GV50 99 aa4.48□□□□□ -1.69
CASC4-208ENST00000559151 H3BT86 120 aa4.48□□□□□ -1.69
CASC4-208ENST00000559151 KLRC4O43908 158 aa4.48□□□□□ -1.69
CASC4-208ENST00000559151 DHFRP00374 187 aa4.48□□□□□ -1.69
CASC4-208ENST00000559151 FGF6P10767 208 aa4.48□□□□□ -1.69
CASC4-208ENST00000559151 KCNE1P15382 129 aa4.48□□□□□ -1.69
CASC4-208ENST00000559151 IFITM2Q01629 132 aa4.48□□□□□ -1.69
CASC4-208ENST00000559151 CAV1Q03135 178 aa4.48□□□□□ -1.69
CASC4-208ENST00000559151 NDUFA5Q16718 116 aa4.48□□□□□ -1.69
CASC4-208ENST00000559151 ZNF791Q3KP31 576 aaPredicted RBP4.48□□□□□ -1.69
CASC4-208ENST00000559151 PCOTHQ58A44 107 aa4.48□□□□□ -1.69
CASC4-208ENST00000559151 SYPL2Q5VXT5 272 aa4.48□□□□□ -1.69
CASC4-208ENST00000559151 DCANP1Q8TF63 244 aa4.48□□□□□ -1.69
CASC4-208ENST00000559151 KLK6Q92876 244 aa4.48□□□□□ -1.69
CASC4-208ENST00000559151 DGCR14Q96DF8 476 aaKnown RBP4.48□□□□□ -1.69
CASC4-208ENST00000559151 GINS2Q9Y248 185 aa4.48□□□□□ -1.69
CASC4-208ENST00000559151 PIEZO1Q92508 2521 aa4.48□□□□□ -1.69
CASC4-208ENST00000559151 ALPK3Q96L96 1907 aa4.48□□□□□ -1.69
CASC4-208ENST00000559151 ARFGEF2Q9Y6D5 1785 aa4.48□□□□□ -1.69
CASC4-208ENST00000559151 CCL5P13501 91 aa4.47□□□□□ -1.69
CASC4-208ENST00000559151 CSN1S1P47710 185 aa4.47□□□□□ -1.69
CASC4-208ENST00000559151 SULT1A1P50225 295 aa4.47□□□□□ -1.69
CASC4-208ENST00000559151 OR4D2P58180 307 aa4.47□□□□□ -1.69
CASC4-208ENST00000559151 GUK1Q16774 197 aa4.47□□□□□ -1.69
CASC4-208ENST00000559151 Q6ZTI0 123 aa4.47□□□□□ -1.69
CASC4-208ENST00000559151 C1orf158Q8N1D5 194 aa4.47□□□□□ -1.69
CASC4-208ENST00000559151 RMND5BQ96G75 393 aaPredicted RBP4.47□□□□□ -1.69
CASC4-208ENST00000559151 SLC22A13Q9Y226 551 aa4.47□□□□□ -1.69
CASC4-208ENST00000559151 MUC6Q6W4X9 2439 aa4.47□□□□□ -1.69
CASC4-208ENST00000559151 KDM3BQ7LBC6 1761 aa4.47□□□□□ -1.69
CASC4-208ENST00000559151 TJP1Q07157 1748 aa4.46□□□□□ -1.69
CASC4-208ENST00000559151 KIF20BQ96Q89 1820 aa4.46□□□□□ -1.69
CASC4-208ENST00000559151 COL4A5P29400 1685 aa4.46□□□□□ -1.7
CASC4-208ENST00000559151 KIF24Q5T7B8 1368 aa4.46□□□□□ -1.7
CASC4-208ENST00000559151 A0A1B0GVG6 124 aa4.46□□□□□ -1.7
CASC4-208ENST00000559151 S100A7P31151 101 aa4.46□□□□□ -1.7
CASC4-208ENST00000559151 ERVS71-1P61550 626 aa4.46□□□□□ -1.7
CASC4-208ENST00000559151 CCDC58Q4VC31 144 aa4.46□□□□□ -1.7
CASC4-208ENST00000559151 ZNF705AQ6ZN79 300 aaPredicted RBP4.46□□□□□ -1.7
CASC4-208ENST00000559151 OR5B17Q8NGF7 314 aa4.46□□□□□ -1.7
CASC4-208ENST00000559151 FAM172AQ8WUF8 416 aa4.46□□□□□ -1.7
CASC4-208ENST00000559151 AP3S1Q92572 193 aa4.46□□□□□ -1.7
CASC4-208ENST00000559151 CMTM6Q9NX76 183 aa4.46□□□□□ -1.7
CASC4-208ENST00000559151 LEPROTO15243 131 aa4.45□□□□□ -1.7
CASC4-208ENST00000559151 SERPINB1P30740 379 aa4.45□□□□□ -1.7
CASC4-208ENST00000559151 RPL28P46779 137 aaKnown RBP4.45□□□□□ -1.7
CASC4-208ENST00000559151 TPI1P60174 286 aa4.45□□□□□ -1.7
CASC4-208ENST00000559151 KRTAP12-4P60329 112 aa4.45□□□□□ -1.7
CASC4-208ENST00000559151 AKIRIN2Q53H80 203 aa4.45□□□□□ -1.7
CASC4-208ENST00000559151 LYZL1Q6UWQ5 148 aa4.45□□□□□ -1.7
CASC4-208ENST00000559151 CLVS1Q8IUQ0 354 aaPredicted RBP4.45□□□□□ -1.7
CASC4-208ENST00000559151 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.45□□□□□ -1.7
CASC4-208ENST00000559151 PRRT1Q99946 306 aa4.45□□□□□ -1.7
CASC4-208ENST00000559151 TONSLQ96HA7 1378 aa4.44□□□□□ -1.7
CASC4-208ENST00000559151 DNAH12Q6ZR08 3092 aa4.44□□□□□ -1.7
CASC4-208ENST00000559151 IGHV3-64A0A075B6Q5 118 aa4.44□□□□□ -1.7
CASC4-208ENST00000559151 NDUFA2O43678 99 aa4.44□□□□□ -1.7
CASC4-208ENST00000559151 CREBL2O60519 120 aaPredicted RBP4.44□□□□□ -1.7
CASC4-208ENST00000559151 IGKV1-16P04430 117 aa4.44□□□□□ -1.7
CASC4-208ENST00000559151 SRP19P09132 144 aaKnown RBP4.44□□□□□ -1.7
CASC4-208ENST00000559151 LGALS1P09382 135 aaKnown RBP4.44□□□□□ -1.7
CASC4-208ENST00000559151 ZNF705DP0CH99 300 aaPredicted RBP4.44□□□□□ -1.7
CASC4-208ENST00000559151 DEFA4P12838 97 aa4.44□□□□□ -1.7
CASC4-208ENST00000559151 GLT8D1Q68CQ7 371 aa4.44□□□□□ -1.7
CASC4-208ENST00000559151 TRAPPC5Q8IUR0 188 aa4.44□□□□□ -1.7
CASC4-208ENST00000559151 NEK7Q8TDX7 302 aa4.44□□□□□ -1.7
CASC4-208ENST00000559151 XAGE1AQ9HD64 81 aa4.44□□□□□ -1.7
CASC4-208ENST00000559151 TIMM9Q9Y5J7 89 aa4.44□□□□□ -1.7
CASC4-208ENST00000559151 NCKAP5O14513 1909 aa4.44□□□□□ -1.7
CASC4-208ENST00000559151 CCDC171Q6TFL3 1326 aa4.44□□□□□ -1.7
CASC4-208ENST00000559151 ZNF532Q9HCE3 1301 aa4.44□□□□□ -1.7
CASC4-208ENST00000559151 EFCAB10A6NFE3 127 aa4.43□□□□□ -1.7
CASC4-208ENST00000559151 SMIM24O75264 130 aa4.43□□□□□ -1.7
CASC4-208ENST00000559151 OMPP47874 163 aa4.43□□□□□ -1.7
CASC4-208ENST00000559151 SMCO1Q147U7 214 aa4.43□□□□□ -1.7
CASC4-208ENST00000559151 KRTAP13-4Q3LI77 160 aa4.43□□□□□ -1.7
CASC4-208ENST00000559151 LRRC28Q86X40 367 aaPredicted RBP4.43□□□□□ -1.7
CASC4-208ENST00000559151 GID8Q9NWU2 228 aa4.43□□□□□ -1.7
CASC4-208ENST00000559151 NAT8Q9UHE5 227 aa4.43□□□□□ -1.7
CASC4-208ENST00000559151 FLT4P35916 1363 aa4.42□□□□□ -1.7
CASC4-208ENST00000559151 SCN7AQ01118 1682 aa4.42□□□□□ -1.7
CASC4-208ENST00000559151 PSME3P61289 254 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms