RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 HARBI1Q96MB7 349 aa12.2□□□□□ -0.46
CDC42BPB-203ENST00000558867 CLCC1Q96S66 551 aa12.2□□□□□ -0.46
CDC42BPB-203ENST00000558867 TSNAXQ99598 290 aaKnown RBP12.2□□□□□ -0.46
CDC42BPB-203ENST00000558867 METTL1Q9UBP6 276 aaKnown RBP12.2□□□□□ -0.46
CDC42BPB-203ENST00000558867 STRAPQ9Y3F4 350 aaKnown RBP12.2□□□□□ -0.46
CDC42BPB-203ENST00000558867 SRRM4A7MD48 611 aaKnown RBP12.19□□□□□ -0.46
CDC42BPB-203ENST00000558867 CEBPZOSA8MTT3 80 aa12.19□□□□□ -0.46
CDC42BPB-203ENST00000558867 FCN1O00602 326 aa12.19□□□□□ -0.46
CDC42BPB-203ENST00000558867 SHOXO15266 292 aa12.19□□□□□ -0.46
CDC42BPB-203ENST00000558867 RBMXL2O75526 392 aaKnown RBP12.19□□□□□ -0.46
CDC42BPB-203ENST00000558867 KBTBD11O94819 623 aa12.19□□□□□ -0.46
CDC42BPB-203ENST00000558867 EGR2P11161 476 aaPredicted RBP12.19□□□□□ -0.46
CDC42BPB-203ENST00000558867 RAB5CP51148 216 aa12.19□□□□□ -0.46
CDC42BPB-203ENST00000558867 KLF5Q13887 457 aaPredicted RBP12.19□□□□□ -0.46
CDC42BPB-203ENST00000558867 SSX9Q7RTT3 188 aa12.19□□□□□ -0.46
CDC42BPB-203ENST00000558867 TMED6Q8WW62 240 aa12.19□□□□□ -0.46
CDC42BPB-203ENST00000558867 GNPNAT1Q96EK6 184 aaPredicted RBP12.19□□□□□ -0.46
CDC42BPB-203ENST00000558867 FAM103A1Q9BTL3 118 aaKnown RBP12.19□□□□□ -0.46
CDC42BPB-203ENST00000558867 SMIM3Q9BZL3 60 aa12.19□□□□□ -0.46
CDC42BPB-203ENST00000558867 TRAV3A0A0B4J244 114 aa12.18□□□□□ -0.46
CDC42BPB-203ENST00000558867 ANKRD34BA5PLL1 514 aa12.18□□□□□ -0.46
CDC42BPB-203ENST00000558867 PMS2P5A8MQ11 134 aa12.18□□□□□ -0.46
CDC42BPB-203ENST00000558867 CST7O76096 145 aa12.18□□□□□ -0.46
CDC42BPB-203ENST00000558867 IFNA17P01571 189 aa12.18□□□□□ -0.46
CDC42BPB-203ENST00000558867 IGLV2-23P01705 113 aa12.18□□□□□ -0.46
CDC42BPB-203ENST00000558867 SAA1P0DJI8 122 aaPredicted RBP12.18□□□□□ -0.46
CDC42BPB-203ENST00000558867 OR2B8PP59922 312 aa12.18□□□□□ -0.46
CDC42BPB-203ENST00000558867 VKORC1L1Q8N0U8 176 aa12.18□□□□□ -0.46
CDC42BPB-203ENST00000558867 EIF4E3Q8N5X7 224 aaKnown RBP12.18□□□□□ -0.46
CDC42BPB-203ENST00000558867 TEX45Q8NA69 505 aa12.18□□□□□ -0.46
CDC42BPB-203ENST00000558867 OR2K2Q8NGT1 345 aa12.18□□□□□ -0.46
CDC42BPB-203ENST00000558867 PINX1Q96BK5 328 aaKnown RBP12.18□□□□□ -0.46
CDC42BPB-203ENST00000558867 TMEM68Q96MH6 324 aa12.18□□□□□ -0.46
CDC42BPB-203ENST00000558867 HIPK2Q9H2X6 1198 aa12.18□□□□□ -0.46
CDC42BPB-203ENST00000558867 SIGLEC8Q9NYZ4 499 aa12.18□□□□□ -0.46
CDC42BPB-203ENST00000558867 PEMTQ9UBM1 199 aa12.18□□□□□ -0.46
CDC42BPB-203ENST00000558867 H3BP45 60 aa12.17□□□□□ -0.46
CDC42BPB-203ENST00000558867 CNIH1O95406 144 aa12.17□□□□□ -0.46
CDC42BPB-203ENST00000558867 CA2P00918 260 aa12.17□□□□□ -0.46
CDC42BPB-203ENST00000558867 SYNJ2BPP57105 145 aa12.17□□□□□ -0.46
CDC42BPB-203ENST00000558867 PRCDQ00LT1 54 aa12.17□□□□□ -0.46
CDC42BPB-203ENST00000558867 VWC2Q2TAL6 325 aa12.17□□□□□ -0.46
CDC42BPB-203ENST00000558867 VMA21Q3ZAQ7 101 aa12.17□□□□□ -0.46
CDC42BPB-203ENST00000558867 SPANXN5Q5MJ07 72 aa12.17□□□□□ -0.46
CDC42BPB-203ENST00000558867 FAM74A1Q5RGS3 127 aa12.17□□□□□ -0.46
CDC42BPB-203ENST00000558867 PEF1Q9UBV8 284 aaKnown RBP12.17□□□□□ -0.46
CDC42BPB-203ENST00000558867 C15orf62A8K5M9 175 aa12.16□□□□□ -0.46
CDC42BPB-203ENST00000558867 UMAD1C9J7I0 102 aa12.16□□□□□ -0.46
CDC42BPB-203ENST00000558867 IFNA5P01569 189 aa12.16□□□□□ -0.46
CDC42BPB-203ENST00000558867 METTL15P1P0C7V9 234 aa12.16□□□□□ -0.46
CDC42BPB-203ENST00000558867 RPS16P62249 146 aaKnown RBP12.16□□□□□ -0.46
CDC42BPB-203ENST00000558867 BLOC1S1P78537 153 aa12.16□□□□□ -0.46
CDC42BPB-203ENST00000558867 ARL16Q0P5N6 197 aa12.16□□□□□ -0.46
CDC42BPB-203ENST00000558867 CLINT1Q14677 625 aa12.16□□□□□ -0.46
CDC42BPB-203ENST00000558867 FXYD3Q14802 87 aa12.16□□□□□ -0.46
CDC42BPB-203ENST00000558867 PSG5Q15238 335 aa12.16□□□□□ -0.46
CDC42BPB-203ENST00000558867 RPEL1Q2QD12 228 aa12.16□□□□□ -0.46
CDC42BPB-203ENST00000558867 PSMG3Q9BT73 122 aaPredicted RBP12.16□□□□□ -0.46
CDC42BPB-203ENST00000558867 GGACTQ9BVM4 153 aa12.16□□□□□ -0.46
CDC42BPB-203ENST00000558867 PFDN2Q9UHV9 154 aa12.16□□□□□ -0.46
CDC42BPB-203ENST00000558867 OR51B2Q9Y5P1 312 aa12.16□□□□□ -0.46
CDC42BPB-203ENST00000558867 CRYGBP07316 175 aa12.15□□□□□ -0.46
CDC42BPB-203ENST00000558867 MAS1LP35410 378 aa12.15□□□□□ -0.46
CDC42BPB-203ENST00000558867 CD81P60033 236 aa12.15□□□□□ -0.46
CDC42BPB-203ENST00000558867 RPL8P62917 257 aaKnown RBP12.15□□□□□ -0.46
CDC42BPB-203ENST00000558867 SLC38A11Q08AI6 406 aa12.15□□□□□ -0.46
CDC42BPB-203ENST00000558867 HSD17B13Q7Z5P4 300 aaPredicted RBP12.15□□□□□ -0.46
CDC42BPB-203ENST00000558867 COMMD7Q86VX2 200 aa12.15□□□□□ -0.46
CDC42BPB-203ENST00000558867 TMEM217Q8N7C4 229 aa12.15□□□□□ -0.46
CDC42BPB-203ENST00000558867 OR5T1Q8NG75 326 aa12.15□□□□□ -0.46
CDC42BPB-203ENST00000558867 OR10P1Q8NGE3 313 aa12.15□□□□□ -0.46
CDC42BPB-203ENST00000558867 USMG5Q96IX5 58 aa12.15□□□□□ -0.46
CDC42BPB-203ENST00000558867 TMEM147Q9BVK8 224 aa12.15□□□□□ -0.46
CDC42BPB-203ENST00000558867 FNDC10F2Z333 226 aa12.14□□□□□ -0.47
CDC42BPB-203ENST00000558867 ATP6V0CP27449 155 aa12.14□□□□□ -0.47
CDC42BPB-203ENST00000558867 BSXQ3C1V8 233 aa12.14□□□□□ -0.47
CDC42BPB-203ENST00000558867 LILRB2Q8N423 598 aa12.14□□□□□ -0.47
CDC42BPB-203ENST00000558867 OR1L8Q8NGR8 309 aa12.14□□□□□ -0.47
CDC42BPB-203ENST00000558867 LYPD6BQ8NI32 183 aa12.14□□□□□ -0.47
CDC42BPB-203ENST00000558867 CXorf58Q96LI9 332 aa12.14□□□□□ -0.47
CDC42BPB-203ENST00000558867 FAM110AQ9BQ89 295 aa12.14□□□□□ -0.47
CDC42BPB-203ENST00000558867 PLEKHA3Q9HB20 300 aa12.14□□□□□ -0.47
CDC42BPB-203ENST00000558867 RETNQ9HD89 108 aa12.14□□□□□ -0.47
CDC42BPB-203ENST00000558867 HEYLQ9NQ87 328 aaPredicted RBP12.14□□□□□ -0.47
CDC42BPB-203ENST00000558867 NDUFA4L2Q9NRX3 87 aa12.14□□□□□ -0.47
CDC42BPB-203ENST00000558867 TIMM9Q9Y5J7 89 aa12.14□□□□□ -0.47
CDC42BPB-203ENST00000558867 PLECQ15149 4684 aaKnown RBP12.14□□□□□ -0.47
CDC42BPB-203ENST00000558867 ALMS1Q8TCU4 4167 aa12.13□□□□□ -0.47
CDC42BPB-203ENST00000558867 TEX50A0A1B0GTY4 177 aa12.13□□□□□ -0.47
CDC42BPB-203ENST00000558867 MFSD2BA6NFX1 497 aa12.13□□□□□ -0.47
CDC42BPB-203ENST00000558867 PRSS46E5RG02 174 aa12.13□□□□□ -0.47
CDC42BPB-203ENST00000558867 BRI3O95415 125 aa12.13□□□□□ -0.47
CDC42BPB-203ENST00000558867 CSN3P07498 182 aa12.13□□□□□ -0.47
CDC42BPB-203ENST00000558867 HOXA1P49639 335 aaPredicted RBP12.13□□□□□ -0.47
CDC42BPB-203ENST00000558867 RAB11AP62491 216 aa12.13□□□□□ -0.47
CDC42BPB-203ENST00000558867 DPPA3Q6W0C5 159 aa12.13□□□□□ -0.47
CDC42BPB-203ENST00000558867 IL34Q6ZMJ4 242 aa12.13□□□□□ -0.47
CDC42BPB-203ENST00000558867 MMD2Q8IY49 270 aa12.13□□□□□ -0.47
CDC42BPB-203ENST00000558867 HSD17B11Q8NBQ5 300 aa12.13□□□□□ -0.47
CDC42BPB-203ENST00000558867 PCNPQ8WW12 178 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms