RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 TMEM212A6NML5 194 aa1.61□□□□□ -2.15
CASC4-206ENST00000558847 PROSCO94903 275 aa1.61□□□□□ -2.15
CASC4-206ENST00000558847 IGKV2D-40P01614 121 aaPredicted RBP1.61□□□□□ -2.15
CASC4-206ENST00000558847 CRYGAP11844 174 aa1.61□□□□□ -2.15
CASC4-206ENST00000558847 MIFP14174 115 aa1.61□□□□□ -2.15
CASC4-206ENST00000558847 SPI1P17947 270 aa1.61□□□□□ -2.15
CASC4-206ENST00000558847 SRP14P37108 136 aaKnown RBP1.61□□□□□ -2.15
CASC4-206ENST00000558847 RHOBP62745 196 aa1.61□□□□□ -2.15
CASC4-206ENST00000558847 EIF5AP63241 154 aaKnown RBP1.61□□□□□ -2.15
CASC4-206ENST00000558847 OR13D1Q8NGV5 346 aa1.61□□□□□ -2.15
CASC4-206ENST00000558847 YPEL2Q96QA6 119 aa1.61□□□□□ -2.15
CASC4-206ENST00000558847 SLC50A1Q9BRV3 221 aa1.61□□□□□ -2.15
CASC4-206ENST00000558847 PYCARDQ9ULZ3 195 aa1.61□□□□□ -2.15
CASC4-206ENST00000558847 NUMA1Q14980 2115 aa1.6□□□□□ -2.15
CASC4-206ENST00000558847 TRAV4A0A0B4J268 109 aa1.6□□□□□ -2.15
CASC4-206ENST00000558847 AIPO00170 330 aa1.6□□□□□ -2.15
CASC4-206ENST00000558847 PRB1P04280 392 aa1.6□□□□□ -2.15
CASC4-206ENST00000558847 ASAH2BP0C7U1 165 aa1.6□□□□□ -2.15
CASC4-206ENST00000558847 ARL14EPLP0DKL9 152 aa1.6□□□□□ -2.15
CASC4-206ENST00000558847 FKBP2P26885 142 aaKnown RBP1.6□□□□□ -2.15
CASC4-206ENST00000558847 PIGPP57054 158 aa1.6□□□□□ -2.15
CASC4-206ENST00000558847 TSNQ15631 228 aaKnown RBP1.6□□□□□ -2.15
CASC4-206ENST00000558847 DHRS4L2Q6PKH6 230 aa1.6□□□□□ -2.15
CASC4-206ENST00000558847 TRABDQ9H4I3 376 aa1.6□□□□□ -2.15
CASC4-206ENST00000558847 HS3ST2Q9Y278 367 aa1.6□□□□□ -2.15
CASC4-206ENST00000558847 BRWD1Q9NSI6 2320 aa1.59□□□□□ -2.15
CASC4-206ENST00000558847 IGKV1D-42A0A075B6H8 117 aa1.59□□□□□ -2.15
CASC4-206ENST00000558847 TRGV10A0A0A0MS01 117 aa1.59□□□□□ -2.15
CASC4-206ENST00000558847 C1orf196B1AJZ1 125 aa1.59□□□□□ -2.15
CASC4-206ENST00000558847 UBL3O95164 117 aa1.59□□□□□ -2.15
CASC4-206ENST00000558847 CYBAP13498 195 aa1.59□□□□□ -2.15
CASC4-206ENST00000558847 KRR1Q13601 381 aaKnown RBP1.59□□□□□ -2.15
CASC4-206ENST00000558847 TAF1AQ15573 450 aaPredicted RBP1.59□□□□□ -2.15
CASC4-206ENST00000558847 C10orf55Q5SWW7 151 aa1.59□□□□□ -2.15
CASC4-206ENST00000558847 HACD4Q5VWC8 232 aa1.59□□□□□ -2.15
CASC4-206ENST00000558847 TMED4Q7Z7H5 227 aa1.59□□□□□ -2.15
CASC4-206ENST00000558847 OR2T10Q8NGZ9 312 aa1.59□□□□□ -2.15
CASC4-206ENST00000558847 TEX47Q8TBZ9 253 aa1.59□□□□□ -2.15
CASC4-206ENST00000558847 CCDC94Q9BW85 323 aaPredicted RBP1.59□□□□□ -2.15
CASC4-206ENST00000558847 TMEM133Q9H2Q1 129 aa1.59□□□□□ -2.15
CASC4-206ENST00000558847 SNURFQ9Y675 71 aa1.59□□□□□ -2.15
CASC4-206ENST00000558847 PCF11O94913 1555 aaKnown RBP1.59□□□□□ -2.16
CASC4-206ENST00000558847 GLI3P10071 1580 aa1.59□□□□□ -2.16
CASC4-206ENST00000558847 IGKV3-7A0A075B6H7 116 aa1.58□□□□□ -2.16
CASC4-206ENST00000558847 HMGB3O15347 200 aaKnown RBP1.58□□□□□ -2.16
CASC4-206ENST00000558847 OR2T1O43869 369 aa1.58□□□□□ -2.16
CASC4-206ENST00000558847 NDUFC2O95298 119 aa1.58□□□□□ -2.16
CASC4-206ENST00000558847 ANGP03950 147 aaKnown RBP1.58□□□□□ -2.16
CASC4-206ENST00000558847 BRS3P32247 399 aa1.58□□□□□ -2.16
CASC4-206ENST00000558847 RHOGP84095 191 aa1.58□□□□□ -2.16
CASC4-206ENST00000558847 POU6F1Q14863 301 aa1.58□□□□□ -2.16
CASC4-206ENST00000558847 CDK5R1Q15078 307 aa1.58□□□□□ -2.16
CASC4-206ENST00000558847 RRN3P1Q2M238 152 aa1.58□□□□□ -2.16
CASC4-206ENST00000558847 BCL2L15Q5TBC7 163 aa1.58□□□□□ -2.16
CASC4-206ENST00000558847 LINC00311Q8N616 119 aa1.58□□□□□ -2.16
CASC4-206ENST00000558847 OR52R1Q8NGF1 315 aa1.58□□□□□ -2.16
CASC4-206ENST00000558847 AQP3Q92482 292 aa1.58□□□□□ -2.16
CASC4-206ENST00000558847 PAIP2Q9BPZ3 127 aaKnown RBP1.58□□□□□ -2.16
CASC4-206ENST00000558847 TMEM70Q9BUB7 260 aa1.58□□□□□ -2.16
CASC4-206ENST00000558847 COL4A1P02462 1669 aa1.58□□□□□ -2.16
CASC4-206ENST00000558847 MED1Q15648 1581 aaPredicted RBP1.57□□□□□ -2.16
CASC4-206ENST00000558847 ATG12O94817 140 aa1.57□□□□□ -2.16
CASC4-206ENST00000558847 RPL19P84098 196 aaKnown RBP1.57□□□□□ -2.16
CASC4-206ENST00000558847 SCGB2B2Q4G0G5 96 aa1.57□□□□□ -2.16
CASC4-206ENST00000558847 Q8N2B8 174 aa1.57□□□□□ -2.16
CASC4-206ENST00000558847 OR4C6Q8NH72 309 aa1.57□□□□□ -2.16
CASC4-206ENST00000558847 CDC26Q8NHZ8 85 aa1.57□□□□□ -2.16
CASC4-206ENST00000558847 AP3S1Q92572 193 aa1.57□□□□□ -2.16
CASC4-206ENST00000558847 LINC00467Q9BRT7 94 aa1.57□□□□□ -2.16
CASC4-206ENST00000558847 KRTAP4-1Q9BYQ7 146 aa1.57□□□□□ -2.16
CASC4-206ENST00000558847 UTP11Q9Y3A2 253 aaKnown RBP1.57□□□□□ -2.16
CASC4-206ENST00000558847 EIF3AQ14152 1382 aaKnown RBP1.57□□□□□ -2.16
CASC4-206ENST00000558847 CLDN25C9JDP6 229 aa1.56□□□□□ -2.16
CASC4-206ENST00000558847 OR1I1O60431 355 aa1.56□□□□□ -2.16
CASC4-206ENST00000558847 GGCTO75223 188 aaKnown RBP1.56□□□□□ -2.16
CASC4-206ENST00000558847 C1QBP02746 253 aa1.56□□□□□ -2.16
CASC4-206ENST00000558847 NEFHP12036 1026 aa1.56□□□□□ -2.16
CASC4-206ENST00000558847 ATP5G3P48201 142 aa1.56□□□□□ -2.16
CASC4-206ENST00000558847 MYL5Q02045 173 aa1.56□□□□□ -2.16
CASC4-206ENST00000558847 PDE6HQ13956 83 aa1.56□□□□□ -2.16
CASC4-206ENST00000558847 BRMS1LQ5PSV4 323 aa1.56□□□□□ -2.16
CASC4-206ENST00000558847 AKR1C8PQ5T2L2 129 aa1.56□□□□□ -2.16
CASC4-206ENST00000558847 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.56□□□□□ -2.16
CASC4-206ENST00000558847 OR10J5Q8NHC4 309 aa1.56□□□□□ -2.16
CASC4-206ENST00000558847 WFDC5Q8TCV5 224 aa1.56□□□□□ -2.16
CASC4-206ENST00000558847 C4orf3Q8WVX3 66 aa1.56□□□□□ -2.16
CASC4-206ENST00000558847 ADAT3Q96EY9 351 aaPredicted RBP1.56□□□□□ -2.16
CASC4-206ENST00000558847 HEATR5AQ86XA9 2040 aa1.56□□□□□ -2.16
CASC4-206ENST00000558847 SDK1Q7Z5N4 2213 aa1.55□□□□□ -2.16
CASC4-206ENST00000558847 G3V2T6 193 aa1.55□□□□□ -2.16
CASC4-206ENST00000558847 IFNA1P01562 189 aa1.55□□□□□ -2.16
CASC4-206ENST00000558847 MGST1P10620 155 aaKnown RBP1.55□□□□□ -2.16
CASC4-206ENST00000558847 SERPINB9P50453 376 aa1.55□□□□□ -2.16
CASC4-206ENST00000558847 RAB4BP61018 213 aa1.55□□□□□ -2.16
CASC4-206ENST00000558847 C22orf39Q6P5X5 142 aa1.55□□□□□ -2.16
CASC4-206ENST00000558847 Q6ZSA8 131 aa1.55□□□□□ -2.16
CASC4-206ENST00000558847 S100A7AQ86SG5 101 aa1.55□□□□□ -2.16
CASC4-206ENST00000558847 C10orf105Q8TEF2 133 aa1.55□□□□□ -2.16
CASC4-206ENST00000558847 SFT2D1Q8WV19 159 aa1.55□□□□□ -2.16
CASC4-206ENST00000558847 CANT1Q8WVQ1 401 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms