RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 GTF3AQ92664 365 aaKnown RBP11.63□□□□□ -0.55
SPG11-210ENST00000558319 TM2D1Q9BX74 207 aa11.63□□□□□ -0.55
SPG11-210ENST00000558319 IGKV1D-13A0A0B4J2D9 117 aa11.63□□□□□ -0.55
SPG11-210ENST00000558319 TRGV4A0A0C4DH28 118 aa11.63□□□□□ -0.55
SPG11-210ENST00000558319 NPIPB13A6NJU9 1138 aa11.63□□□□□ -0.55
SPG11-210ENST00000558319 NPIPB5A8MRT5 1133 aa11.63□□□□□ -0.55
SPG11-210ENST00000558319 SAP30O75446 220 aa11.63□□□□□ -0.55
SPG11-210ENST00000558319 IGKV1-13P0DP09 117 aa11.63□□□□□ -0.55
SPG11-210ENST00000558319 CHCHD1Q96BP2 118 aaKnown RBP11.63□□□□□ -0.55
SPG11-210ENST00000558319 GAGE12BA1L429 117 aa11.62□□□□□ -0.55
SPG11-210ENST00000558319 NDPQ00604 133 aa11.62□□□□□ -0.55
SPG11-210ENST00000558319 UBE2V1Q13404 147 aa11.62□□□□□ -0.55
SPG11-210ENST00000558319 C1orf194Q5T5A4 169 aa11.62□□□□□ -0.55
SPG11-210ENST00000558319 NR2C2APQ86WQ0 139 aa11.62□□□□□ -0.55
SPG11-210ENST00000558319 VGLL1Q99990 258 aa11.62□□□□□ -0.55
SPG11-210ENST00000558319 LY6HO94772 140 aa11.62□□□□□ -0.55
SPG11-210ENST00000558319 TIMP3P35625 211 aa11.62□□□□□ -0.55
SPG11-210ENST00000558319 PSG3Q16557 428 aa11.62□□□□□ -0.55
SPG11-210ENST00000558319 CHCHD2Q9Y6H1 151 aaPredicted RBP11.62□□□□□ -0.55
SPG11-210ENST00000558319 NHSL1Q5SYE7 1610 aa11.62□□□□□ -0.55
SPG11-210ENST00000558319 NRN1LQ496H8 165 aa11.62□□□□□ -0.55
SPG11-210ENST00000558319 ADAMTSL5Q6ZMM2 481 aa11.62□□□□□ -0.55
SPG11-210ENST00000558319 TRAV8-3A0A0A6YYJ7 113 aa11.62□□□□□ -0.55
SPG11-210ENST00000558319 PSG7Q13046 419 aa11.62□□□□□ -0.55
SPG11-210ENST00000558319 S100A7L2Q5SY68 101 aa11.62□□□□□ -0.55
SPG11-210ENST00000558319 PINLYPA6NC86 204 aa11.61□□□□□ -0.55
SPG11-210ENST00000558319 NDUFA2O43678 99 aa11.61□□□□□ -0.55
SPG11-210ENST00000558319 CCL1P22362 96 aa11.61□□□□□ -0.55
SPG11-210ENST00000558319 C5orf24Q7Z6I8 188 aa11.61□□□□□ -0.55
SPG11-210ENST00000558319 BMPERQ8N8U9 685 aa11.61□□□□□ -0.55
SPG11-210ENST00000558319 KIR3DS1Q14943 382 aa11.61□□□□□ -0.55
SPG11-210ENST00000558319 PYY3Q5JQD4 70 aa11.61□□□□□ -0.55
SPG11-210ENST00000558319 PLSCR4Q9NRQ2 329 aa11.61□□□□□ -0.55
SPG11-210ENST00000558319 DPM3Q9P2X0 92 aa11.61□□□□□ -0.55
SPG11-210ENST00000558319 LY75O60449 1722 aa11.61□□□□□ -0.55
SPG11-210ENST00000558319 LAMTOR3Q9UHA4 124 aa11.61□□□□□ -0.55
SPG11-210ENST00000558319 TOMM40O96008 361 aa11.61□□□□□ -0.55
SPG11-210ENST00000558319 RIPPLY2Q5TAB7 128 aa11.61□□□□□ -0.55
SPG11-210ENST00000558319 TEX38Q6PEX7 206 aa11.61□□□□□ -0.55
SPG11-210ENST00000558319 OSTCQ9NRP0 149 aa11.61□□□□□ -0.55
SPG11-210ENST00000558319 CST9LQ9H4G1 147 aa11.61□□□□□ -0.55
SPG11-210ENST00000558319 PSG8Q9UQ74 426 aa11.61□□□□□ -0.55
SPG11-210ENST00000558319 COL4A5P29400 1685 aa11.61□□□□□ -0.55
SPG11-210ENST00000558319 GREM1O60565 184 aa11.61□□□□□ -0.55
SPG11-210ENST00000558319 GNLYP22749 145 aa11.61□□□□□ -0.55
SPG11-210ENST00000558319 PTPRFP10586 1907 aa11.6□□□□□ -0.55
SPG11-210ENST00000558319 LAMB2P55268 1798 aa11.6□□□□□ -0.55
SPG11-210ENST00000558319 SAA2-SAA4A0A096LPE2 208 aa11.6□□□□□ -0.55
SPG11-210ENST00000558319 D6R8Y8 96 aa11.6□□□□□ -0.55
SPG11-210ENST00000558319 F8VVB4 439 aa11.6□□□□□ -0.55
SPG11-210ENST00000558319 F8VWA3 439 aa11.6□□□□□ -0.55
SPG11-210ENST00000558319 SAA2P0DJI9 122 aaPredicted RBP11.6□□□□□ -0.55
SPG11-210ENST00000558319 ZNF664Q8N3J9 261 aa11.6□□□□□ -0.55
SPG11-210ENST00000558319 OR9G4Q8NGQ1 327 aa11.6□□□□□ -0.55
SPG11-210ENST00000558319 MAP1BP46821 2468 aaKnown RBP11.6□□□□□ -0.55
SPG11-210ENST00000558319 LRP5O75197 1615 aa11.6□□□□□ -0.55
SPG11-210ENST00000558319 UBE2E2Q96LR5 201 aa11.6□□□□□ -0.55
SPG11-210ENST00000558319 LGALS1P09382 135 aaKnown RBP11.6□□□□□ -0.55
SPG11-210ENST00000558319 RPL15P61313 204 aaKnown RBP11.6□□□□□ -0.55
SPG11-210ENST00000558319 FOXF2Q12947 444 aa11.6□□□□□ -0.55
SPG11-210ENST00000558319 EFNB3Q15768 340 aa11.6□□□□□ -0.55
SPG11-210ENST00000558319 GAGE2AQ6NT46 116 aa11.6□□□□□ -0.55
SPG11-210ENST00000558319 EREGO14944 169 aa11.6□□□□□ -0.55
SPG11-210ENST00000558319 PLPPR1Q8TBJ4 325 aa11.6□□□□□ -0.55
SPG11-210ENST00000558319 MS4A6AQ9H2W1 248 aa11.6□□□□□ -0.55
SPG11-210ENST00000558319 IGKV2-40A0A087WW87 121 aaPredicted RBP11.59□□□□□ -0.55
SPG11-210ENST00000558319 A0A1B0GTI1 187 aa11.59□□□□□ -0.55
SPG11-210ENST00000558319 IGKV2D-40P01614 121 aaPredicted RBP11.59□□□□□ -0.55
SPG11-210ENST00000558319 CRPP02741 224 aa11.59□□□□□ -0.55
SPG11-210ENST00000558319 ZNF138P52744 262 aa11.59□□□□□ -0.55
SPG11-210ENST00000558319 OSR1Q8TAX0 266 aaPredicted RBP11.59□□□□□ -0.55
SPG11-210ENST00000558319 PAX1P15863 534 aa11.59□□□□□ -0.55
SPG11-210ENST00000558319 LAGE3Q14657 143 aa11.59□□□□□ -0.55
SPG11-210ENST00000558319 PSMG4Q5JS54 123 aa11.59□□□□□ -0.55
SPG11-210ENST00000558319 SPATA31B1PQ5VZV4 182 aa11.59□□□□□ -0.55
SPG11-210ENST00000558319 SPRR3Q9UBC9 169 aa11.59□□□□□ -0.55
SPG11-210ENST00000558319 FAM57AQ8TBR7 257 aa11.59□□□□□ -0.55
SPG11-210ENST00000558319 C9orf153Q5TBE3 101 aa11.59□□□□□ -0.55
SPG11-210ENST00000558319 SELLP14151 372 aa11.58□□□□□ -0.56
SPG11-210ENST00000558319 ACTL10Q5JWF8 245 aa11.58□□□□□ -0.56
SPG11-210ENST00000558319 DLX4Q92988 240 aaPredicted RBP11.58□□□□□ -0.56
SPG11-210ENST00000558319 ADARB2-AS1A8MUL3 147 aa11.58□□□□□ -0.56
SPG11-210ENST00000558319 MLNRO43193 412 aa11.58□□□□□ -0.56
SPG11-210ENST00000558319 FGF16O43320 207 aa11.58□□□□□ -0.56
SPG11-210ENST00000558319 CFHR3Q02985 330 aa11.58□□□□□ -0.56
SPG11-210ENST00000558319 CSRP2Q16527 193 aa11.58□□□□□ -0.56
SPG11-210ENST00000558319 ZNF329Q86UD4 541 aa11.58□□□□□ -0.56
SPG11-210ENST00000558319 C8orf46Q8TAG6 207 aa11.58□□□□□ -0.56
SPG11-210ENST00000558319 TMEM167AQ8TBQ9 72 aa11.58□□□□□ -0.56
SPG11-210ENST00000558319 ZNF319Q9P2F9 582 aa11.58□□□□□ -0.56
SPG11-210ENST00000558319 ZNF474Q6S9Z5 364 aaPredicted RBP11.58□□□□□ -0.56
SPG11-210ENST00000558319 TSKUQ8WUA8 353 aa11.58□□□□□ -0.56
SPG11-210ENST00000558319 OR9G9P0C7N8 305 aa11.58□□□□□ -0.56
SPG11-210ENST00000558319 ORMDL2Q53FV1 153 aa11.58□□□□□ -0.56
SPG11-210ENST00000558319 TP53BP1Q12888 1972 aaPredicted RBP11.57□□□□□ -0.56
SPG11-210ENST00000558319 C3orf79P0CE67 100 aa11.57□□□□□ -0.56
SPG11-210ENST00000558319 CHCHD5Q9BSY4 110 aa11.57□□□□□ -0.56
SPG11-210ENST00000558319 ITGB1BP1O14713 200 aa11.57□□□□□ -0.56
SPG11-210ENST00000558319 RHOGP84095 191 aa11.57□□□□□ -0.56
SPG11-210ENST00000558319 LINC00477Q96M19 166 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms