RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 STAG3L4Q8TBR4 150 aa2.2□□□□□ -2.06
TDP1-217ENST00000557782 HIST1H2BLQ99880 126 aa2.2□□□□□ -2.06
TDP1-217ENST00000557782 KRTAP4-5Q9BYR2 181 aa2.2□□□□□ -2.06
TDP1-217ENST00000557782 YIPF3Q9GZM5 350 aa2.2□□□□□ -2.06
TDP1-217ENST00000557782 ADGRL1O94910 1474 aa2.2□□□□□ -2.06
TDP1-217ENST00000557782 CAMSAP2Q08AD1 1489 aa2.2□□□□□ -2.06
TDP1-217ENST00000557782 CECR2Q9BXF3 1484 aa2.2□□□□□ -2.06
TDP1-217ENST00000557782 SHANK3Q9BYB0 1731 aa2.2□□□□□ -2.06
TDP1-217ENST00000557782 BCL9O00512 1426 aa2.19□□□□□ -2.06
TDP1-217ENST00000557782 TECPR2O15040 1411 aa2.19□□□□□ -2.06
TDP1-217ENST00000557782 TRAV36DV7A0A075B6V5 113 aa2.19□□□□□ -2.06
TDP1-217ENST00000557782 A0A087WX48 190 aa2.19□□□□□ -2.06
TDP1-217ENST00000557782 A0A0J9YX75 114 aa2.19□□□□□ -2.06
TDP1-217ENST00000557782 TRDV1A0A1B0GX56 115 aa2.19□□□□□ -2.06
TDP1-217ENST00000557782 TMEM189A5PLL7 270 aa2.19□□□□□ -2.06
TDP1-217ENST00000557782 LRCOL1A6NCL2 159 aa2.19□□□□□ -2.06
TDP1-217ENST00000557782 EFCAB10A6NFE3 127 aa2.19□□□□□ -2.06
TDP1-217ENST00000557782 H7C2G1 150 aa2.19□□□□□ -2.06
TDP1-217ENST00000557782 OR2T1O43869 369 aa2.19□□□□□ -2.06
TDP1-217ENST00000557782 GPX2P18283 190 aa2.19□□□□□ -2.06
TDP1-217ENST00000557782 RPS3P23396 243 aaKnown RBP eCLIP2.19□□□□□ -2.06
TDP1-217ENST00000557782 AKR1C3P42330 323 aa2.19□□□□□ -2.06
TDP1-217ENST00000557782 EIF3IQ13347 325 aaKnown RBP2.19□□□□□ -2.06
TDP1-217ENST00000557782 OR8B8Q15620 311 aa2.19□□□□□ -2.06
TDP1-217ENST00000557782 LY6EQ16553 131 aa2.19□□□□□ -2.06
TDP1-217ENST00000557782 DEFB134Q4QY38 66 aa2.19□□□□□ -2.06
TDP1-217ENST00000557782 PYDC2Q56P42 97 aa2.19□□□□□ -2.06
TDP1-217ENST00000557782 PABPC1L2AQ5JQF8 200 aa2.19□□□□□ -2.06
TDP1-217ENST00000557782 SH2D6Q7Z4S9 175 aa2.19□□□□□ -2.06
TDP1-217ENST00000557782 PRR15Q8IV56 129 aa2.19□□□□□ -2.06
TDP1-217ENST00000557782 PFN4Q8NHR9 129 aa2.19□□□□□ -2.06
TDP1-217ENST00000557782 CMTM2Q8TAZ6 248 aa2.19□□□□□ -2.06
TDP1-217ENST00000557782 DCANP1Q8TF63 244 aa2.19□□□□□ -2.06
TDP1-217ENST00000557782 SLC25A21Q9BQT8 299 aaPredicted RBP2.19□□□□□ -2.06
TDP1-217ENST00000557782 EPDR1Q9UM22 224 aa2.19□□□□□ -2.06
TDP1-217ENST00000557782 HHLA3Q9XRX5 114 aa2.19□□□□□ -2.06
TDP1-217ENST00000557782 MED31Q9Y3C7 131 aa2.19□□□□□ -2.06
TDP1-217ENST00000557782 KIF21BO75037 1637 aa2.18□□□□□ -2.06
TDP1-217ENST00000557782 IGKV1-9A0A0C4DH69 117 aa2.18□□□□□ -2.06
TDP1-217ENST00000557782 C7orf71A4D174 169 aa2.18□□□□□ -2.06
TDP1-217ENST00000557782 ARRDC5A6NEK1 342 aa2.18□□□□□ -2.06
TDP1-217ENST00000557782 TMEM256-PLSCR3K7ERE1 68 aa2.18□□□□□ -2.06
TDP1-217ENST00000557782 OVOL1O14753 267 aa2.18□□□□□ -2.06
TDP1-217ENST00000557782 CST7O76096 145 aa2.18□□□□□ -2.06
TDP1-217ENST00000557782 IGKV1-16P04430 117 aa2.18□□□□□ -2.06
TDP1-217ENST00000557782 HRES1P13985 223 aa2.18□□□□□ -2.06
TDP1-217ENST00000557782 INSL3P51460 131 aa2.18□□□□□ -2.06
TDP1-217ENST00000557782 FXYD2P54710 66 aa2.18□□□□□ -2.06
TDP1-217ENST00000557782 NDUFA6P56556 154 aa2.18□□□□□ -2.06
TDP1-217ENST00000557782 LINC00315P59091 139 aa2.18□□□□□ -2.06
TDP1-217ENST00000557782 SUPT4H1P63272 117 aaKnown RBP2.18□□□□□ -2.06
TDP1-217ENST00000557782 SMIM21Q3B7S5 101 aa2.18□□□□□ -2.06
TDP1-217ENST00000557782 KHDC3LQ587J8 217 aa2.18□□□□□ -2.06
TDP1-217ENST00000557782 C22orf39Q6P5X5 142 aa2.18□□□□□ -2.06
TDP1-217ENST00000557782 TMEM229BQ8NBD8 167 aa2.18□□□□□ -2.06
TDP1-217ENST00000557782 OR4C16Q8NGL9 310 aa2.18□□□□□ -2.06
TDP1-217ENST00000557782 CARD19Q96LW7 228 aa2.18□□□□□ -2.06
TDP1-217ENST00000557782 MRPL32Q9BYC8 188 aaKnown RBP2.18□□□□□ -2.06
TDP1-217ENST00000557782 TCEAL2Q9H3H9 227 aaPredicted RBP2.18□□□□□ -2.06
TDP1-217ENST00000557782 CYTL1Q9NRR1 136 aa2.18□□□□□ -2.06
TDP1-217ENST00000557782 TRAPPC2LQ9UL33 140 aa2.18□□□□□ -2.06
TDP1-217ENST00000557782 MED1Q15648 1581 aaPredicted RBP2.18□□□□□ -2.06
TDP1-217ENST00000557782 SEC16AO15027 2179 aa2.17□□□□□ -2.06
TDP1-217ENST00000557782 PRDM2Q13029 1718 aa2.17□□□□□ -2.06
TDP1-217ENST00000557782 TRBV10-2A0A0K0K1G8 114 aa2.17□□□□□ -2.06
TDP1-217ENST00000557782 MEIS3P1A6NDR6 274 aa2.17□□□□□ -2.06
TDP1-217ENST00000557782 G3V3Q6 166 aa2.17□□□□□ -2.06
TDP1-217ENST00000557782 C3orf84H3BNL1 204 aa2.17□□□□□ -2.06
TDP1-217ENST00000557782 LYZL6O75951 148 aa2.17□□□□□ -2.06
TDP1-217ENST00000557782 RNASE4P34096 147 aaKnown RBP2.17□□□□□ -2.06
TDP1-217ENST00000557782 DYNLT3P51808 116 aa2.17□□□□□ -2.06
TDP1-217ENST00000557782 PSG9Q00887 426 aa2.17□□□□□ -2.06
TDP1-217ENST00000557782 MYL5Q02045 173 aa2.17□□□□□ -2.06
TDP1-217ENST00000557782 FOXF1Q12946 379 aa2.17□□□□□ -2.06
TDP1-217ENST00000557782 HRCT1Q6UXD1 115 aa2.17□□□□□ -2.06
TDP1-217ENST00000557782 OR8I2Q8N0Y5 310 aa2.17□□□□□ -2.06
TDP1-217ENST00000557782 Q8NDZ9 215 aa2.17□□□□□ -2.06
TDP1-217ENST00000557782 OR2T10Q8NGZ9 312 aa2.17□□□□□ -2.06
TDP1-217ENST00000557782 DEDD2Q8WXF8 326 aa2.17□□□□□ -2.06
TDP1-217ENST00000557782 MRPS24Q96EL2 167 aaKnown RBP2.17□□□□□ -2.06
TDP1-217ENST00000557782 LINC00167Q96N53 147 aa2.17□□□□□ -2.06
TDP1-217ENST00000557782 PFDN5Q99471 154 aa2.17□□□□□ -2.06
TDP1-217ENST00000557782 LXNQ9BS40 222 aa2.17□□□□□ -2.06
TDP1-217ENST00000557782 ADAT1Q9BUB4 502 aaKnown RBP2.17□□□□□ -2.06
TDP1-217ENST00000557782 ZNF471Q9BX82 626 aaPredicted RBP2.17□□□□□ -2.06
TDP1-217ENST00000557782 POPDC3Q9HBV1 291 aa2.17□□□□□ -2.06
TDP1-217ENST00000557782 COPZ2Q9P299 210 aa2.17□□□□□ -2.06
TDP1-217ENST00000557782 MALRD1Q5VYJ5 2156 aa2.17□□□□□ -2.06
TDP1-217ENST00000557782 ARID1AO14497 2285 aa2.17□□□□□ -2.06
TDP1-217ENST00000557782 GPR179Q6PRD1 2367 aa2.17□□□□□ -2.06
TDP1-217ENST00000557782 CEP162Q5TB80 1403 aa2.17□□□□□ -2.06
TDP1-217ENST00000557782 CD109Q6YHK3 1445 aa2.17□□□□□ -2.06
TDP1-217ENST00000557782 ARHGAP32A7KAX9 2087 aa2.16□□□□□ -2.06
TDP1-217ENST00000557782 SYNJ1O43426 1573 aa2.16□□□□□ -2.06
TDP1-217ENST00000557782 IGHV3-64A0A075B6Q5 118 aa2.16□□□□□ -2.06
TDP1-217ENST00000557782 GABARAPH6UMI1 98 aa2.16□□□□□ -2.06
TDP1-217ENST00000557782 H7BYZ3 331 aa2.16□□□□□ -2.06
TDP1-217ENST00000557782 IGKV3-11P04433 115 aa2.16□□□□□ -2.06
TDP1-217ENST00000557782 HTR1AP08908 422 aa2.16□□□□□ -2.06
TDP1-217ENST00000557782 COX4I1P13073 169 aa2.16□□□□□ -2.06
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