RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 VSIRQ9H7M9 311 aa16.85■□□□□ 0.29
PABPN1-207ENST00000556821 UBQLN2Q9UHD9 624 aa16.85■□□□□ 0.29
PABPN1-207ENST00000556821 SLC25A4P12235 298 aa16.84■□□□□ 0.29
PABPN1-207ENST00000556821 SLC25A6P12236 298 aa16.84■□□□□ 0.29
PABPN1-207ENST00000556821 LILRB2Q8N423 598 aa16.84■□□□□ 0.29
PABPN1-207ENST00000556821 ST8SIA2Q92186 375 aa16.84■□□□□ 0.29
PABPN1-207ENST00000556821 C7orf50Q9BRJ6 194 aaKnown RBP16.84■□□□□ 0.29
PABPN1-207ENST00000556821 TMED3Q9Y3Q3 217 aa16.84■□□□□ 0.29
PABPN1-207ENST00000556821 U3KQ87 197 aa16.84■□□□□ 0.29
PABPN1-207ENST00000556821 AGRNO00468 2067 aa16.84■□□□□ 0.29
PABPN1-207ENST00000556821 STARD9Q9P2P6 4700 aa16.83■□□□□ 0.29
PABPN1-207ENST00000556821 TRAV30A0A087WSZ9 112 aa16.83■□□□□ 0.28
PABPN1-207ENST00000556821 C9orf170A2RU37 121 aa16.83■□□□□ 0.28
PABPN1-207ENST00000556821 PLA2G10O15496 165 aa16.83■□□□□ 0.28
PABPN1-207ENST00000556821 IFNA10P01566 189 aa16.83■□□□□ 0.28
PABPN1-207ENST00000556821 LYL1P12980 280 aa16.83■□□□□ 0.28
PABPN1-207ENST00000556821 EDA2RQ9HAV5 297 aa16.83■□□□□ 0.28
PABPN1-207ENST00000556821 OR4C46A6NHA9 309 aa16.82■□□□□ 0.28
PABPN1-207ENST00000556821 HOXB5P09067 269 aa16.82■□□□□ 0.28
PABPN1-207ENST00000556821 GGNBP1Q5YKI7 109 aa16.82■□□□□ 0.28
PABPN1-207ENST00000556821 NOXA1Q86UR1 476 aa16.82■□□□□ 0.28
PABPN1-207ENST00000556821 OR1S2Q8NGQ3 325 aa16.82■□□□□ 0.28
PABPN1-207ENST00000556821 FAM90A26D6RGX4 464 aa16.81■□□□□ 0.28
PABPN1-207ENST00000556821 DHRS2Q13268 280 aa16.81■□□□□ 0.28
PABPN1-207ENST00000556821 ETFRF1Q6IPR1 90 aa16.81■□□□□ 0.28
PABPN1-207ENST00000556821 TCF24Q7RTU0 167 aa16.81■□□□□ 0.28
PABPN1-207ENST00000556821 FAM110AQ9BQ89 295 aa16.81■□□□□ 0.28
PABPN1-207ENST00000556821 IGKV3-7A0A075B6H7 116 aa16.8■□□□□ 0.28
PABPN1-207ENST00000556821 IGHV3-66A0A0C4DH42 116 aa16.8■□□□□ 0.28
PABPN1-207ENST00000556821 CENPXA8MT69 81 aa16.8■□□□□ 0.28
PABPN1-207ENST00000556821 SCGB2A1O75556 95 aa16.8■□□□□ 0.28
PABPN1-207ENST00000556821 ADAP1O75689 374 aa16.8■□□□□ 0.28
PABPN1-207ENST00000556821 OR4E1P0C645 316 aa16.8■□□□□ 0.28
PABPN1-207ENST00000556821 ANXA7P20073 488 aaKnown RBP16.8■□□□□ 0.28
PABPN1-207ENST00000556821 OR10J1P30954 320 aa16.8■□□□□ 0.28
PABPN1-207ENST00000556821 LYG2Q86SG7 212 aa16.8■□□□□ 0.28
PABPN1-207ENST00000556821 NPIPB3Q92617 1050 aa16.8■□□□□ 0.28
PABPN1-207ENST00000556821 GGTLC1Q9BX51 225 aa16.8■□□□□ 0.28
PABPN1-207ENST00000556821 HERC2O95714 4834 aa16.79■□□□□ 0.28
PABPN1-207ENST00000556821 MPTX1A8MV57 137 aa16.79■□□□□ 0.28
PABPN1-207ENST00000556821 IAPPP10997 89 aa16.79■□□□□ 0.28
PABPN1-207ENST00000556821 CRYBB3P26998 211 aa16.79■□□□□ 0.28
PABPN1-207ENST00000556821 YPEL3P61236 119 aaPredicted RBP16.79■□□□□ 0.28
PABPN1-207ENST00000556821 ACY3Q96HD9 319 aa16.79■□□□□ 0.28
PABPN1-207ENST00000556821 LOC102724200A0A096LPH7 203 aaPredicted RBP16.78■□□□□ 0.28
PABPN1-207ENST00000556821 DFFBO76075 338 aa16.78■□□□□ 0.28
PABPN1-207ENST00000556821 NPPCP23582 126 aa16.78■□□□□ 0.28
PABPN1-207ENST00000556821 BMI1P35226 326 aa16.78■□□□□ 0.28
PABPN1-207ENST00000556821 TFPI2P48307 235 aa16.78■□□□□ 0.28
PABPN1-207ENST00000556821 ATP5IP56385 69 aaPredicted RBP16.78■□□□□ 0.28
PABPN1-207ENST00000556821 GBGT1Q8N5D6 347 aa16.78■□□□□ 0.28
PABPN1-207ENST00000556821 METTL26Q96S19 204 aa16.78■□□□□ 0.28
PABPN1-207ENST00000556821 MAGT1Q9H0U3 335 aa16.78■□□□□ 0.28
PABPN1-207ENST00000556821 A6NHS1 94 aa16.77■□□□□ 0.28
PABPN1-207ENST00000556821 LYRM1O43325 122 aa16.77■□□□□ 0.28
PABPN1-207ENST00000556821 IFNA4P05014 189 aa16.77■□□□□ 0.28
PABPN1-207ENST00000556821 CNPY1Q3B7I2 92 aa16.77■□□□□ 0.28
PABPN1-207ENST00000556821 U3KQE9 123 aa16.77■□□□□ 0.28
PABPN1-207ENST00000556821 SYNGR2O43760 224 aa16.76■□□□□ 0.27
PABPN1-207ENST00000556821 CD5P06127 495 aa16.76■□□□□ 0.27
PABPN1-207ENST00000556821 USF2Q15853 346 aaPredicted RBP16.76■□□□□ 0.27
PABPN1-207ENST00000556821 ZNF124Q15973 351 aa16.76■□□□□ 0.27
PABPN1-207ENST00000556821 LINC00299Q6ZSB3 139 aa16.76■□□□□ 0.27
PABPN1-207ENST00000556821 C20orf85Q9H1P6 137 aa16.76■□□□□ 0.27
PABPN1-207ENST00000556821 MAP6D1Q9H9H5 199 aa16.76■□□□□ 0.27
PABPN1-207ENST00000556821 MED6O75586 246 aa16.75■□□□□ 0.27
PABPN1-207ENST00000556821 TOMM40O96008 361 aa16.75■□□□□ 0.27
PABPN1-207ENST00000556821 P2RY1P47900 373 aa16.75■□□□□ 0.27
PABPN1-207ENST00000556821 GAMTQ14353 236 aa16.75■□□□□ 0.27
PABPN1-207ENST00000556821 C4orf46Q504U0 113 aa16.75■□□□□ 0.27
PABPN1-207ENST00000556821 APRG1Q8IVJ8 170 aa16.75■□□□□ 0.27
PABPN1-207ENST00000556821 COQ8AQ8NI60 647 aa16.75■□□□□ 0.27
PABPN1-207ENST00000556821 Q8WTZ3 238 aa16.75■□□□□ 0.27
PABPN1-207ENST00000556821 CCDC32Q9BV29 185 aa16.75■□□□□ 0.27
PABPN1-207ENST00000556821 MS4A6AQ9H2W1 248 aa16.75■□□□□ 0.27
PABPN1-207ENST00000556821 TMEM231Q9H6L2 316 aa16.75■□□□□ 0.27
PABPN1-207ENST00000556821 CSMD3Q7Z407 3707 aa16.74■□□□□ 0.27
PABPN1-207ENST00000556821 IGKV1D-37A0A075B6S9 117 aa16.74■□□□□ 0.27
PABPN1-207ENST00000556821 A0A1W2PS18 150 aa16.74■□□□□ 0.27
PABPN1-207ENST00000556821 PRSS46E5RG02 174 aa16.74■□□□□ 0.27
PABPN1-207ENST00000556821 GPX4P36969 197 aaPredicted RBP16.74■□□□□ 0.27
PABPN1-207ENST00000556821 ID3Q02535 119 aa16.74■□□□□ 0.27
PABPN1-207ENST00000556821 WRBO00258 174 aa16.73■□□□□ 0.27
PABPN1-207ENST00000556821 IL4P05112 153 aa16.73■□□□□ 0.27
PABPN1-207ENST00000556821 PSG1P11464 419 aa16.73■□□□□ 0.27
PABPN1-207ENST00000556821 FAM24BQ8N5W8 94 aa16.73■□□□□ 0.27
PABPN1-207ENST00000556821 OR4D5Q8NGN0 318 aa16.73■□□□□ 0.27
PABPN1-207ENST00000556821 SLC35E1Q96K37 410 aa16.73■□□□□ 0.27
PABPN1-207ENST00000556821 CIB3Q96Q77 187 aaPredicted RBP16.73■□□□□ 0.27
PABPN1-207ENST00000556821 TRAV2A0A0B4J234 112 aa16.72■□□□□ 0.27
PABPN1-207ENST00000556821 TCRBP04435 133 aa16.72■□□□□ 0.27
PABPN1-207ENST00000556821 HNRNPCP07910 306 aaKnown RBP eCLIP16.72■□□□□ 0.27
PABPN1-207ENST00000556821 RD3LP0DJH9 198 aa16.72■□□□□ 0.27
PABPN1-207ENST00000556821 RAB11AP62491 216 aa16.72■□□□□ 0.27
PABPN1-207ENST00000556821 PAFAH1B2P68402 229 aa16.72■□□□□ 0.27
PABPN1-207ENST00000556821 ZFAND6Q6FIF0 208 aa16.72■□□□□ 0.27
PABPN1-207ENST00000556821 WFDC3Q8IUB2 231 aa16.72■□□□□ 0.27
PABPN1-207ENST00000556821 MITD1Q8WV92 249 aa16.72■□□□□ 0.27
PABPN1-207ENST00000556821 GLMPQ8WWB7 406 aa16.72■□□□□ 0.27
PABPN1-207ENST00000556821 OVOL2Q9BRP0 275 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms