RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 TFPI2P48307 235 aa7.74□□□□□ -1.17
SNX6-208ENST00000556712 ODF3L2Q3SX64 289 aa7.74□□□□□ -1.17
SNX6-208ENST00000556712 LINC00322Q6ZN03 302 aaPredicted RBP7.74□□□□□ -1.17
SNX6-208ENST00000556712 LYG2Q86SG7 212 aa7.74□□□□□ -1.17
SNX6-208ENST00000556712 LILRB2Q8N423 598 aa7.74□□□□□ -1.17
SNX6-208ENST00000556712 RNASEH2CQ8TDP1 164 aaKnown RBP7.74□□□□□ -1.17
SNX6-208ENST00000556712 SPAG8Q99932 426 aaPredicted RBP7.74□□□□□ -1.17
SNX6-208ENST00000556712 FAM110AQ9BQ89 295 aa7.74□□□□□ -1.17
SNX6-208ENST00000556712 GINS3Q9BRX5 216 aa7.74□□□□□ -1.17
SNX6-208ENST00000556712 C20orf85Q9H1P6 137 aa7.74□□□□□ -1.17
SNX6-208ENST00000556712 PAIP2BQ9ULR5 123 aaKnown RBP7.74□□□□□ -1.17
SNX6-208ENST00000556712 TMED3Q9Y3Q3 217 aa7.74□□□□□ -1.17
SNX6-208ENST00000556712 IFNA4P05014 189 aa7.73□□□□□ -1.17
SNX6-208ENST00000556712 SLC25A4P12235 298 aa7.73□□□□□ -1.17
SNX6-208ENST00000556712 OR10J1P30954 320 aa7.73□□□□□ -1.17
SNX6-208ENST00000556712 ZNF124Q15973 351 aa7.73□□□□□ -1.17
SNX6-208ENST00000556712 C4orf46Q504U0 113 aa7.73□□□□□ -1.17
SNX6-208ENST00000556712 LAMTOR1Q6IAA8 161 aa7.73□□□□□ -1.17
SNX6-208ENST00000556712 GBGT1Q8N5D6 347 aa7.73□□□□□ -1.17
SNX6-208ENST00000556712 NPIPB3Q92617 1050 aa7.73□□□□□ -1.17
SNX6-208ENST00000556712 SPATA25Q9BR10 227 aa7.73□□□□□ -1.17
SNX6-208ENST00000556712 STAB2Q8WWQ8 2551 aa7.72□□□□□ -1.17
SNX6-208ENST00000556712 TRAV6A0A075B6T7 132 aa7.72□□□□□ -1.17
SNX6-208ENST00000556712 PIGBOS1A0A0B4J2F0 54 aa7.72□□□□□ -1.17
SNX6-208ENST00000556712 OR4C46A6NHA9 309 aa7.72□□□□□ -1.17
SNX6-208ENST00000556712 H3BP45 60 aa7.72□□□□□ -1.17
SNX6-208ENST00000556712 WRBO00258 174 aa7.72□□□□□ -1.17
SNX6-208ENST00000556712 SCGB2A1O75556 95 aa7.72□□□□□ -1.17
SNX6-208ENST00000556712 DFFBO76075 338 aa7.72□□□□□ -1.17
SNX6-208ENST00000556712 SLC25A6P12236 298 aa7.72□□□□□ -1.17
SNX6-208ENST00000556712 ETFRF1Q6IPR1 90 aa7.72□□□□□ -1.17
SNX6-208ENST00000556712 TCF24Q7RTU0 167 aa7.72□□□□□ -1.17
SNX6-208ENST00000556712 OR1S2Q8NGQ3 325 aa7.72□□□□□ -1.17
SNX6-208ENST00000556712 COQ8AQ8NI60 647 aa7.72□□□□□ -1.17
SNX6-208ENST00000556712 CCDC32Q9BV29 185 aa7.72□□□□□ -1.17
SNX6-208ENST00000556712 CACFD1Q9UGQ2 172 aa7.72□□□□□ -1.17
SNX6-208ENST00000556712 TBC1D24Q9ULP9 559 aa7.72□□□□□ -1.17
SNX6-208ENST00000556712 U3KQ87 197 aa7.72□□□□□ -1.17
SNX6-208ENST00000556712 TRAV30A0A087WSZ9 112 aa7.71□□□□□ -1.18
SNX6-208ENST00000556712 FAM90A26D6RGX4 464 aa7.71□□□□□ -1.18
SNX6-208ENST00000556712 CCSO14618 274 aa7.71□□□□□ -1.18
SNX6-208ENST00000556712 SYNGR2O43760 224 aa7.71□□□□□ -1.18
SNX6-208ENST00000556712 TCRBP04435 133 aa7.71□□□□□ -1.18
SNX6-208ENST00000556712 IL4P05112 153 aa7.71□□□□□ -1.18
SNX6-208ENST00000556712 POLR2GP62487 172 aaKnown RBP eCLIP7.71□□□□□ -1.18
SNX6-208ENST00000556712 USF2Q15853 346 aaPredicted RBP7.71□□□□□ -1.18
SNX6-208ENST00000556712 FAM90A2PQ658T7 463 aa7.71□□□□□ -1.18
SNX6-208ENST00000556712 NOXA1Q86UR1 476 aa7.71□□□□□ -1.18
SNX6-208ENST00000556712 WFDC3Q8IUB2 231 aa7.71□□□□□ -1.18
SNX6-208ENST00000556712 APRG1Q8IVJ8 170 aa7.71□□□□□ -1.18
SNX6-208ENST00000556712 FAM24BQ8N5W8 94 aa7.71□□□□□ -1.18
SNX6-208ENST00000556712 OR4D5Q8NGN0 318 aa7.71□□□□□ -1.18
SNX6-208ENST00000556712 METTL26Q96S19 204 aa7.71□□□□□ -1.18
SNX6-208ENST00000556712 SEC22CQ9BRL7 303 aa7.71□□□□□ -1.18
SNX6-208ENST00000556712 GGTLC1Q9BX51 225 aa7.71□□□□□ -1.18
SNX6-208ENST00000556712 VSIRQ9H7M9 311 aa7.71□□□□□ -1.18
SNX6-208ENST00000556712 NUDT15Q9NV35 164 aa7.71□□□□□ -1.18
SNX6-208ENST00000556712 PTTG2Q9NZH5 202 aa7.71□□□□□ -1.18
SNX6-208ENST00000556712 IGKV1D-37A0A075B6S9 117 aa7.7□□□□□ -1.18
SNX6-208ENST00000556712 LOC102724200A0A096LPH7 203 aaPredicted RBP7.7□□□□□ -1.18
SNX6-208ENST00000556712 SSSCA1O60232 199 aa7.7□□□□□ -1.18
SNX6-208ENST00000556712 MED6O75586 246 aa7.7□□□□□ -1.18
SNX6-208ENST00000556712 SCGB1D2O95969 90 aa7.7□□□□□ -1.18
SNX6-208ENST00000556712 RPL35AP18077 110 aaKnown RBP7.7□□□□□ -1.18
SNX6-208ENST00000556712 NPPCP23582 126 aa7.7□□□□□ -1.18
SNX6-208ENST00000556712 CRYBB3P26998 211 aa7.7□□□□□ -1.18
SNX6-208ENST00000556712 BMI1P35226 326 aa7.7□□□□□ -1.18
SNX6-208ENST00000556712 P2RY1P47900 373 aa7.7□□□□□ -1.18
SNX6-208ENST00000556712 YPEL3P61236 119 aaPredicted RBP7.7□□□□□ -1.18
SNX6-208ENST00000556712 RAB11AP62491 216 aa7.7□□□□□ -1.18
SNX6-208ENST00000556712 RPL11P62913 178 aaKnown RBP7.7□□□□□ -1.18
SNX6-208ENST00000556712 GAMTQ14353 236 aa7.7□□□□□ -1.18
SNX6-208ENST00000556712 SLC35E1Q96K37 410 aa7.7□□□□□ -1.18
SNX6-208ENST00000556712 MS4A6AQ9H2W1 248 aa7.7□□□□□ -1.18
SNX6-208ENST00000556712 MAP6D1Q9H9H5 199 aa7.7□□□□□ -1.18
SNX6-208ENST00000556712 ZFP92A6NM28 416 aa7.69□□□□□ -1.18
SNX6-208ENST00000556712 PRSS46E5RG02 174 aa7.69□□□□□ -1.18
SNX6-208ENST00000556712 CCNKO75909 580 aa7.69□□□□□ -1.18
SNX6-208ENST00000556712 TOMM40O96008 361 aa7.69□□□□□ -1.18
SNX6-208ENST00000556712 IFNA21P01568 189 aa7.69□□□□□ -1.18
SNX6-208ENST00000556712 HNRNPCP07910 306 aaKnown RBP eCLIP7.69□□□□□ -1.187e-12■■■□□ 16.5
SNX6-208ENST00000556712 PSG1P11464 419 aa7.69□□□□□ -1.18
SNX6-208ENST00000556712 NKX2-1P43699 371 aaPredicted RBP7.69□□□□□ -1.18
SNX6-208ENST00000556712 ZNF90Q03938 601 aa7.69□□□□□ -1.18
SNX6-208ENST00000556712 IAH1Q2TAA2 248 aaPredicted RBP7.69□□□□□ -1.18
SNX6-208ENST00000556712 SPANXN5Q5MJ07 72 aa7.69□□□□□ -1.18
SNX6-208ENST00000556712 STXBP6Q8NFX7 210 aa7.69□□□□□ -1.18
SNX6-208ENST00000556712 OR51G1Q8NGK1 321 aa7.69□□□□□ -1.18
SNX6-208ENST00000556712 Q8WTZ3 238 aa7.69□□□□□ -1.18
SNX6-208ENST00000556712 MITD1Q8WV92 249 aa7.69□□□□□ -1.18
SNX6-208ENST00000556712 S100ZQ8WXG8 99 aa7.69□□□□□ -1.18
SNX6-208ENST00000556712 PBDC1Q9BVG4 233 aa7.69□□□□□ -1.18
SNX6-208ENST00000556712 WDR12Q9GZL7 423 aaKnown RBP7.69□□□□□ -1.18
SNX6-208ENST00000556712 TMEM231Q9H6L2 316 aa7.69□□□□□ -1.18
SNX6-208ENST00000556712 EDA2RQ9HAV5 297 aa7.69□□□□□ -1.18
SNX6-208ENST00000556712 IGKV1OR2-108A0A075B7D4 117 aa7.68□□□□□ -1.18
SNX6-208ENST00000556712 RD3LP0DJH9 198 aa7.68□□□□□ -1.18
SNX6-208ENST00000556712 GPX4P36969 197 aaPredicted RBP7.68□□□□□ -1.18
SNX6-208ENST00000556712 ATP5IP56385 69 aaPredicted RBP7.68□□□□□ -1.18
SNX6-208ENST00000556712 ID3Q02535 119 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms