RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 CLN5O75503 358 aa7.28□□□□□ -1.24
SRP54-210ENST00000556380 MED6O75586 246 aa7.28□□□□□ -1.24
SRP54-210ENST00000556380 IFNA10P01566 189 aa7.28□□□□□ -1.24
SRP54-210ENST00000556380 IFNA21P01568 189 aa7.28□□□□□ -1.24
SRP54-210ENST00000556380 IGKV1-17P01599 117 aa7.28□□□□□ -1.24
SRP54-210ENST00000556380 GP9P14770 177 aa7.28□□□□□ -1.24
SRP54-210ENST00000556380 GPX4P36969 197 aaPredicted RBP7.28□□□□□ -1.24
SRP54-210ENST00000556380 OPRK1P41145 380 aa7.28□□□□□ -1.24
SRP54-210ENST00000556380 CD300EQ496F6 205 aaPredicted RBP7.28□□□□□ -1.24
SRP54-210ENST00000556380 TOMM20LQ6UXN7 152 aa7.28□□□□□ -1.24
SRP54-210ENST00000556380 Q8N1Y9 231 aa7.28□□□□□ -1.24
SRP54-210ENST00000556380 C12orf45Q8N5I9 185 aaPredicted RBP7.28□□□□□ -1.24
SRP54-210ENST00000556380 ZBTB8BQ8NAP8 495 aaPredicted RBP7.28□□□□□ -1.24
SRP54-210ENST00000556380 UXS1Q8NBZ7 420 aa7.28□□□□□ -1.24
SRP54-210ENST00000556380 OR2K2Q8NGT1 345 aa7.28□□□□□ -1.24
SRP54-210ENST00000556380 MARC2Q969Z3 335 aa7.28□□□□□ -1.24
SRP54-210ENST00000556380 PALMDQ9NP74 551 aa7.28□□□□□ -1.24
SRP54-210ENST00000556380 TECRQ9NZ01 308 aaKnown RBP7.28□□□□□ -1.24
SRP54-210ENST00000556380 MLXQ9UH92 298 aa7.28□□□□□ -1.24
SRP54-210ENST00000556380 UFC1Q9Y3C8 167 aa7.28□□□□□ -1.24
SRP54-210ENST00000556380 HUWE1Q7Z6Z7 4374 aaKnown RBP7.28□□□□□ -1.24
SRP54-210ENST00000556380 RPS10-NUDT3A0A1W2PQS6 291 aa7.27□□□□□ -1.25
SRP54-210ENST00000556380 PRSS46E5RG02 174 aa7.27□□□□□ -1.25
SRP54-210ENST00000556380 GNG7O60262 68 aa7.27□□□□□ -1.25
SRP54-210ENST00000556380 PRAF2O60831 178 aa7.27□□□□□ -1.25
SRP54-210ENST00000556380 IGLC1P0CG04 106 aa7.27□□□□□ -1.25
SRP54-210ENST00000556380 IAPPP10997 89 aa7.27□□□□□ -1.25
SRP54-210ENST00000556380 SLC25A4P12235 298 aa7.27□□□□□ -1.25
SRP54-210ENST00000556380 NKX2-1P43699 371 aaPredicted RBP7.27□□□□□ -1.25
SRP54-210ENST00000556380 PAX9P55771 341 aa7.27□□□□□ -1.25
SRP54-210ENST00000556380 POLR2GP62487 172 aaKnown RBP eCLIP7.27□□□□□ -1.25
SRP54-210ENST00000556380 RELQ04864 619 aaPredicted RBP7.27□□□□□ -1.25
SRP54-210ENST00000556380 CD69Q07108 199 aa7.27□□□□□ -1.25
SRP54-210ENST00000556380 IL15RAQ13261 267 aa7.27□□□□□ -1.25
SRP54-210ENST00000556380 IAH1Q2TAA2 248 aaPredicted RBP7.27□□□□□ -1.25
SRP54-210ENST00000556380 CIB3Q96Q77 187 aaPredicted RBP7.27□□□□□ -1.25
SRP54-210ENST00000556380 MRPL27Q9P0M9 148 aaKnown RBP7.27□□□□□ -1.25
SRP54-210ENST00000556380 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.27□□□□□ -1.25
SRP54-210ENST00000556380 IGHV3OR16-8A0A075B7F1 116 aa7.26□□□□□ -1.25
SRP54-210ENST00000556380 SNRPGP15A8MWD9 76 aa7.26□□□□□ -1.25
SRP54-210ENST00000556380 INMT-MINDY4F8WBC2 141 aa7.26□□□□□ -1.25
SRP54-210ENST00000556380 WRBO00258 174 aa7.26□□□□□ -1.25
SRP54-210ENST00000556380 CCSO14618 274 aa7.26□□□□□ -1.25
SRP54-210ENST00000556380 SCGB2A1O75556 95 aa7.26□□□□□ -1.25
SRP54-210ENST00000556380 MBPP02686 304 aaPredicted RBP7.26□□□□□ -1.25
SRP54-210ENST00000556380 RND2P52198 227 aa7.26□□□□□ -1.25
SRP54-210ENST00000556380 GAMTQ14353 236 aa7.26□□□□□ -1.25
SRP54-210ENST00000556380 TIGITQ495A1 244 aa7.26□□□□□ -1.25
SRP54-210ENST00000556380 ETFRF1Q6IPR1 90 aa7.26□□□□□ -1.25
SRP54-210ENST00000556380 ZNF600Q6ZNG1 722 aa7.26□□□□□ -1.25
SRP54-210ENST00000556380 SLC16A13Q7RTY0 426 aa7.26□□□□□ -1.25
SRP54-210ENST00000556380 NPIPB3Q92617 1050 aa7.26□□□□□ -1.25
SRP54-210ENST00000556380 SMIM8Q96KF7 97 aa7.26□□□□□ -1.25
SRP54-210ENST00000556380 C11orf1Q9H5F2 150 aa7.26□□□□□ -1.25
SRP54-210ENST00000556380 GPN1Q9HCN4 374 aaPredicted RBP7.26□□□□□ -1.25
SRP54-210ENST00000556380 DAZ1Q9NQZ3 744 aaKnown RBP7.26□□□□□ -1.25
SRP54-210ENST00000556380 SMPXQ9UHP9 88 aa7.26□□□□□ -1.25
SRP54-210ENST00000556380 RCL1Q9Y2P8 373 aaKnown RBP7.26□□□□□ -1.25
SRP54-210ENST00000556380 TENM3Q9P273 2699 aa7.26□□□□□ -1.25
SRP54-210ENST00000556380 TRAV30A0A087WSZ9 112 aa7.25□□□□□ -1.25
SRP54-210ENST00000556380 PMS2P5A8MQ11 134 aa7.25□□□□□ -1.25
SRP54-210ENST00000556380 ZNF207O43670 478 aaKnown RBP7.25□□□□□ -1.25
SRP54-210ENST00000556380 SCAF4O95104 1147 aaKnown RBP7.25□□□□□ -1.25
SRP54-210ENST00000556380 IFNA4P05014 189 aa7.25□□□□□ -1.25
SRP54-210ENST00000556380 YPEL3P61236 119 aaPredicted RBP7.25□□□□□ -1.25
SRP54-210ENST00000556380 RPP30P78346 268 aaKnown RBP7.25□□□□□ -1.25
SRP54-210ENST00000556380 DEFB121Q5J5C9 76 aa7.25□□□□□ -1.25
SRP54-210ENST00000556380 LCN12Q6JVE5 192 aa7.25□□□□□ -1.25
SRP54-210ENST00000556380 TMEM61Q8N0U2 210 aa7.25□□□□□ -1.25
SRP54-210ENST00000556380 OR1S2Q8NGQ3 325 aa7.25□□□□□ -1.25
SRP54-210ENST00000556380 DYNLRB2Q8TF09 96 aa7.25□□□□□ -1.25
SRP54-210ENST00000556380 C20orf24Q9BUV8 137 aa7.25□□□□□ -1.25
SRP54-210ENST00000556380 GSKIPQ9P0R6 139 aa7.25□□□□□ -1.25
SRP54-210ENST00000556380 PUS1Q9Y606 427 aaKnown RBP eCLIP7.25□□□□□ -1.25
SRP54-210ENST00000556380 SELENOKQ9Y6D0 94 aa7.25□□□□□ -1.25
SRP54-210ENST00000556380 IGKV1D-37A0A075B6S9 117 aa7.24□□□□□ -1.25
SRP54-210ENST00000556380 TRAV14DV4A0A0A6YYC5 116 aa7.24□□□□□ -1.25
SRP54-210ENST00000556380 TRAV25A0A0B4J276 109 aa7.24□□□□□ -1.25
SRP54-210ENST00000556380 IGHV7-4-1A0A0J9YVY3 117 aa7.24□□□□□ -1.25
SRP54-210ENST00000556380 A8MZ25 164 aa7.24□□□□□ -1.25
SRP54-210ENST00000556380 CHEK1O14757 476 aa7.24□□□□□ -1.25
SRP54-210ENST00000556380 SSSCA1O60232 199 aa7.24□□□□□ -1.25
SRP54-210ENST00000556380 YIF1AO95070 293 aa7.24□□□□□ -1.25
SRP54-210ENST00000556380 PTTG1O95997 202 aa7.24□□□□□ -1.25
SRP54-210ENST00000556380 APOHP02749 345 aaPredicted RBP7.24□□□□□ -1.25
SRP54-210ENST00000556380 OR10J1P30954 320 aa7.24□□□□□ -1.25
SRP54-210ENST00000556380 TAS2R30P59541 319 aa7.24□□□□□ -1.25
SRP54-210ENST00000556380 RAB11AP62491 216 aa7.24□□□□□ -1.25
SRP54-210ENST00000556380 SPANXN5Q5MJ07 72 aa7.24□□□□□ -1.25
SRP54-210ENST00000556380 BTNL8Q6UX41 500 aa7.24□□□□□ -1.25
SRP54-210ENST00000556380 TMEM14EPQ6UXP3 125 aa7.24□□□□□ -1.25
SRP54-210ENST00000556380 LILRB2Q8N423 598 aa7.24□□□□□ -1.25
SRP54-210ENST00000556380 ACY3Q96HD9 319 aa7.24□□□□□ -1.25
SRP54-210ENST00000556380 C2orf50Q96LR7 162 aa7.24□□□□□ -1.25
SRP54-210ENST00000556380 RAB40CQ96S21 281 aa7.24□□□□□ -1.25
SRP54-210ENST00000556380 RHPN1-AS1Q9BWJ2 59 aa7.24□□□□□ -1.25
SRP54-210ENST00000556380 VSIRQ9H7M9 311 aa7.24□□□□□ -1.25
SRP54-210ENST00000556380 STRAPQ9Y3F4 350 aaKnown RBP7.24□□□□□ -1.25
SRP54-210ENST00000556380 IGKV1OR2-108A0A075B7D4 117 aa7.23□□□□□ -1.25
SRP54-210ENST00000556380 C7orf66A4D0T2 115 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms