RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 CORTO00230 105 aa7.66□□□□□ -1.18
SYNE2-221ENST00000556342 TMEM127O75204 238 aa7.66□□□□□ -1.18
SYNE2-221ENST00000556342 CLN5O75503 358 aa7.66□□□□□ -1.18
SYNE2-221ENST00000556342 IFNA10P01566 189 aa7.66□□□□□ -1.18
SYNE2-221ENST00000556342 CD74P04233 296 aa7.66□□□□□ -1.18
SYNE2-221ENST00000556342 RNASE2P10153 161 aaKnown RBP7.66□□□□□ -1.18
SYNE2-221ENST00000556342 PSMG4Q5JS54 123 aa7.66□□□□□ -1.18
SYNE2-221ENST00000556342 TMEM69Q5SWH9 247 aa7.66□□□□□ -1.18
SYNE2-221ENST00000556342 LPCAT3Q6P1A2 487 aa7.66□□□□□ -1.18
SYNE2-221ENST00000556342 Q6ZR54 194 aa7.66□□□□□ -1.18
SYNE2-221ENST00000556342 LYSMD2Q8IV50 215 aa7.66□□□□□ -1.18
SYNE2-221ENST00000556342 SLC35G3Q8N808 338 aa7.66□□□□□ -1.18
SYNE2-221ENST00000556342 TMEM230Q96A57 120 aa7.66□□□□□ -1.18
SYNE2-221ENST00000556342 C1QTNF4Q9BXJ3 329 aa7.66□□□□□ -1.18
SYNE2-221ENST00000556342 FNDC4Q9H6D8 234 aaPredicted RBP7.66□□□□□ -1.18
SYNE2-221ENST00000556342 HELTA6NFD8 242 aa7.65□□□□□ -1.18
SYNE2-221ENST00000556342 SCGB2A1O75556 95 aa7.65□□□□□ -1.18
SYNE2-221ENST00000556342 IFNA21P01568 189 aa7.65□□□□□ -1.18
SYNE2-221ENST00000556342 IFNA17P01571 189 aa7.65□□□□□ -1.18
SYNE2-221ENST00000556342 IGKV1-17P01599 117 aa7.65□□□□□ -1.18
SYNE2-221ENST00000556342 HLA-DMAP28067 261 aa7.65□□□□□ -1.18
SYNE2-221ENST00000556342 OPRK1P41145 380 aa7.65□□□□□ -1.18
SYNE2-221ENST00000556342 EIF2B2P49770 351 aaKnown RBP7.65□□□□□ -1.18
SYNE2-221ENST00000556342 NUTF2P61970 127 aaKnown RBP7.65□□□□□ -1.18
SYNE2-221ENST00000556342 TSPAN5P62079 268 aa7.65□□□□□ -1.18
SYNE2-221ENST00000556342 DHRS2Q13268 280 aa7.65□□□□□ -1.18
SYNE2-221ENST00000556342 UBE2NLQ5JXB2 153 aa7.65□□□□□ -1.18
SYNE2-221ENST00000556342 Q6ZRM9 215 aa7.65□□□□□ -1.18
SYNE2-221ENST00000556342 UBE2DNLQ8IWF7 75 aa7.65□□□□□ -1.18
SYNE2-221ENST00000556342 OR4X1Q8NH49 305 aa7.65□□□□□ -1.18
SYNE2-221ENST00000556342 XCL2Q9UBD3 114 aa7.65□□□□□ -1.18
SYNE2-221ENST00000556342 RAB26Q9ULW5 256 aa7.65□□□□□ -1.18
SYNE2-221ENST00000556342 A0A0B4J293 547 aa7.64□□□□□ -1.19
SYNE2-221ENST00000556342 H3BMM0 161 aa7.64□□□□□ -1.19
SYNE2-221ENST00000556342 IGKV1-5P01602 117 aa7.64□□□□□ -1.19
SYNE2-221ENST00000556342 P0C879 139 aa7.64□□□□□ -1.19
SYNE2-221ENST00000556342 SPART-AS1P0CW21 52 aa7.64□□□□□ -1.19
SYNE2-221ENST00000556342 PRSS3P35030 304 aa7.64□□□□□ -1.19
SYNE2-221ENST00000556342 RPL5P46777 297 aaKnown RBP7.64□□□□□ -1.19
SYNE2-221ENST00000556342 HOXA1P49639 335 aaPredicted RBP7.64□□□□□ -1.19
SYNE2-221ENST00000556342 SUB1P53999 127 aaKnown RBP eCLIP7.64□□□□□ -1.19
SYNE2-221ENST00000556342 UCP3P55916 312 aa7.64□□□□□ -1.19
SYNE2-221ENST00000556342 TIGITQ495A1 244 aa7.64□□□□□ -1.19
SYNE2-221ENST00000556342 SOHLH1Q5JUK2 328 aa7.64□□□□□ -1.19
SYNE2-221ENST00000556342 ZNF705AQ6ZN79 300 aaPredicted RBP7.64□□□□□ -1.19
SYNE2-221ENST00000556342 GLMPQ8WWB7 406 aa7.64□□□□□ -1.19
SYNE2-221ENST00000556342 FAM210BQ96KR6 192 aa7.64□□□□□ -1.19
SYNE2-221ENST00000556342 TRAV30A0A087WSZ9 112 aa7.63□□□□□ -1.19
SYNE2-221ENST00000556342 ZNF705FA8MVS1 300 aaPredicted RBP7.63□□□□□ -1.19
SYNE2-221ENST00000556342 FAM90A26D6RGX4 464 aa7.63□□□□□ -1.19
SYNE2-221ENST00000556342 HNRNPCP07910 306 aaKnown RBP eCLIP7.63□□□□□ -1.19
SYNE2-221ENST00000556342 ZNF705DP0CH99 300 aaPredicted RBP7.63□□□□□ -1.19
SYNE2-221ENST00000556342 ZNF705BP0CI00 300 aaPredicted RBP7.63□□□□□ -1.19
SYNE2-221ENST00000556342 AKR1C2P52895 323 aa7.63□□□□□ -1.19
SYNE2-221ENST00000556342 AP2S1P53680 142 aaPredicted RBP7.63□□□□□ -1.19
SYNE2-221ENST00000556342 EMP1P54849 157 aa7.63□□□□□ -1.19
SYNE2-221ENST00000556342 SNRPD3P62318 126 aaKnown RBP7.63□□□□□ -1.19
SYNE2-221ENST00000556342 C16orf54Q6UWD8 224 aa7.63□□□□□ -1.19
SYNE2-221ENST00000556342 CROCCP3Q8IVE0 287 aa7.63□□□□□ -1.19
SYNE2-221ENST00000556342 SAMD12Q8N8I0 201 aa7.63□□□□□ -1.19
SYNE2-221ENST00000556342 GPX8Q8TED1 209 aa7.63□□□□□ -1.19
SYNE2-221ENST00000556342 NEU1Q99519 415 aa7.63□□□□□ -1.19
SYNE2-221ENST00000556342 PDCD10Q9BUL8 212 aa7.63□□□□□ -1.19
SYNE2-221ENST00000556342 LRP1BQ9NZR2 4599 aa7.62□□□□□ -1.19
SYNE2-221ENST00000556342 TMEM189A5PLL7 270 aa7.62□□□□□ -1.19
SYNE2-221ENST00000556342 IGLC1P0CG04 106 aa7.62□□□□□ -1.19
SYNE2-221ENST00000556342 HLA-DRB4P13762 266 aa7.62□□□□□ -1.19
SYNE2-221ENST00000556342 ETV6P41212 452 aa7.62□□□□□ -1.19
SYNE2-221ENST00000556342 BSXQ3C1V8 233 aa7.62□□□□□ -1.19
SYNE2-221ENST00000556342 RNF212Q495C1 297 aa7.62□□□□□ -1.19
SYNE2-221ENST00000556342 C1orf134Q5TEV5 83 aa7.62□□□□□ -1.19
SYNE2-221ENST00000556342 SEPSECSQ9HD40 501 aaKnown RBP7.62□□□□□ -1.19
SYNE2-221ENST00000556342 ENY2Q9NPA8 101 aa7.62□□□□□ -1.19
SYNE2-221ENST00000556342 NRN1Q9NPD7 142 aa7.62□□□□□ -1.19
SYNE2-221ENST00000556342 DKK2Q9UBU2 259 aa7.62□□□□□ -1.19
SYNE2-221ENST00000556342 HLA-DRB4X5D2U9 266 aa7.62□□□□□ -1.19
SYNE2-221ENST00000556342 TEX48A0A1B0GUV7 120 aa7.61□□□□□ -1.19
SYNE2-221ENST00000556342 RPS10-NUDT3A0A1W2PQS6 291 aa7.61□□□□□ -1.19
SYNE2-221ENST00000556342 SMIM9A6NGZ8 99 aa7.61□□□□□ -1.19
SYNE2-221ENST00000556342 RCVRNP35243 200 aa7.61□□□□□ -1.19
SYNE2-221ENST00000556342 TGFBR1P36897 503 aa7.61□□□□□ -1.19
SYNE2-221ENST00000556342 RND3P61587 244 aa7.61□□□□□ -1.19
SYNE2-221ENST00000556342 TEPPQ6URK8 271 aa7.61□□□□□ -1.19
SYNE2-221ENST00000556342 OR1S2Q8NGQ3 325 aa7.61□□□□□ -1.19
SYNE2-221ENST00000556342 Q8WTZ3 238 aa7.61□□□□□ -1.19
SYNE2-221ENST00000556342 TP53RKQ96S44 253 aa7.61□□□□□ -1.19
SYNE2-221ENST00000556342 YTHDF1Q9BYJ9 559 aaKnown RBP7.61□□□□□ -1.19
SYNE2-221ENST00000556342 IGHV3OR16-12A0A075B7B8 117 aa7.6□□□□□ -1.19
SYNE2-221ENST00000556342 A0A0G2JRQ6 117 aa7.6□□□□□ -1.19
SYNE2-221ENST00000556342 CDK2AP2O75956 126 aa7.6□□□□□ -1.19
SYNE2-221ENST00000556342 ATG12O94817 140 aa7.6□□□□□ -1.19
SYNE2-221ENST00000556342 IL4P05112 153 aa7.6□□□□□ -1.19
SYNE2-221ENST00000556342 PGAM2P15259 253 aa7.6□□□□□ -1.19
SYNE2-221ENST00000556342 OR10J1P30954 320 aa7.6□□□□□ -1.19
SYNE2-221ENST00000556342 NKX2-1P43699 371 aaPredicted RBP7.6□□□□□ -1.19
SYNE2-221ENST00000556342 RND2P52198 227 aa7.6□□□□□ -1.19
SYNE2-221ENST00000556342 PIGPP57054 158 aa7.6□□□□□ -1.19
SYNE2-221ENST00000556342 YPEL3P61236 119 aaPredicted RBP7.6□□□□□ -1.19
SYNE2-221ENST00000556342 DHODHQ02127 395 aa7.6□□□□□ -1.19
SYNE2-221ENST00000556342 NEDD8Q15843 81 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms