RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 TMEM59Q9BXS4 323 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 OR2D2Q9H210 308 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 THYN1Q9P016 225 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 SMPXQ9UHP9 88 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 AK3Q9UIJ7 227 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 RBM7Q9Y580 266 aaKnown RBP3.46□□□□□ -1.86
ATXN3-239ENST00000556315 LRP1BQ9NZR2 4599 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 PKD1P98161 4303 aa3.46□□□□□ -1.86
ATXN3-239ENST00000556315 TRBV6-7A0A0A0MS04 114 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 TRAV1-2A0A0B4J238 106 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 FAM240BA0A1B0GVZ2 78 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 NAP1L6A6NFF2 107 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 MFSD2BA6NFX1 497 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 ZNF705EA8MWA4 302 aaPredicted RBP3.45□□□□□ -1.86
ATXN3-239ENST00000556315 EPM2AB3EWF7 344 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 E7EUB6 86 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 NDUFA4O00483 81 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 CTDSPLO15194 276 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 FABP7O15540 132 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 LYRM1O43325 122 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 FCGR3BO75015 233 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 DFFBO76075 338 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 DIRAS3O95661 229 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 CD5P06127 495 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 AREGP15514 252 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 TGFBR1P36897 503 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 TFPI2P48307 235 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 INPP1P49441 399 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 ETV1P50549 477 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 BRWD1-AS2P59051 145 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 ARPC4P59998 168 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 RRAS2P62070 204 aaPredicted RBP3.45□□□□□ -1.86
ATXN3-239ENST00000556315 PAFAH1B2P68402 229 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 RELQ04864 619 aaPredicted RBP3.45□□□□□ -1.86
ATXN3-239ENST00000556315 CD300CQ08708 224 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 ARFRP1Q13795 201 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 C1orf100Q5SVJ3 147 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 OR2G6Q5TZ20 316 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 FAM89BQ8N5H3 189 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 OR6M1Q8NGM8 313 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 TMEM167AQ8TBQ9 72 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 VN1R17PQ8TDU5 208 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 SECTM1Q8WVN6 248 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 C5orf30Q96GV9 206 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 FAM210BQ96KR6 192 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 DERL3Q96Q80 235 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 OR2A7Q96R45 310 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 ATP6V0BQ99437 205 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 RNF2Q99496 336 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 CMSS1Q9BQ75 279 aaKnown RBP3.45□□□□□ -1.86
ATXN3-239ENST00000556315 NICN1Q9BSH3 213 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 HDHD3Q9BSH5 251 aaPredicted RBP3.45□□□□□ -1.86
ATXN3-239ENST00000556315 URM1Q9BTM9 101 aaKnown RBP3.45□□□□□ -1.86
ATXN3-239ENST00000556315 C20orf24Q9BUV8 137 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 RHPN1-AS1Q9BWJ2 59 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 MIXL1Q9H2W2 232 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 C12orf4Q9NQ89 552 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 CLEC2DQ9UHP7 191 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 PRELID3BQ9Y3B1 194 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 ETV7Q9Y603 341 aa3.45□□□□□ -1.86
ATXN3-239ENST00000556315 DNAH5Q8TE73 4624 aa3.44□□□□□ -1.86
ATXN3-239ENST00000556315 A0A0A6YYD4 124 aa3.44□□□□□ -1.86
ATXN3-239ENST00000556315 IGHV7-4-1A0A0J9YVY3 117 aa3.44□□□□□ -1.86
ATXN3-239ENST00000556315 A0A1B0GW64 132 aa3.44□□□□□ -1.86
ATXN3-239ENST00000556315 C7orf66A4D0T2 115 aa3.44□□□□□ -1.86
ATXN3-239ENST00000556315 C15orf62A8K5M9 175 aa3.44□□□□□ -1.86
ATXN3-239ENST00000556315 TMEM14DPA8MWL7 114 aa3.44□□□□□ -1.86
ATXN3-239ENST00000556315 INMT-MINDY4F8WBC2 141 aa3.44□□□□□ -1.86
ATXN3-239ENST00000556315 CHEK1O14757 476 aa3.44□□□□□ -1.86
ATXN3-239ENST00000556315 BET1O15155 118 aa3.44□□□□□ -1.86
ATXN3-239ENST00000556315 PLA2G10O15496 165 aa3.44□□□□□ -1.86
ATXN3-239ENST00000556315 SOCS1O15524 211 aa3.44□□□□□ -1.86
ATXN3-239ENST00000556315 CYB5BO43169 146 aa3.44□□□□□ -1.86
ATXN3-239ENST00000556315 GSTZ1O43708 216 aaPredicted RBP3.44□□□□□ -1.86
ATXN3-239ENST00000556315 PRAF2O60831 178 aa3.44□□□□□ -1.86
ATXN3-239ENST00000556315 ARL6IP5O75915 188 aa3.44□□□□□ -1.86
ATXN3-239ENST00000556315 KBTBD11O94819 623 aa3.44□□□□□ -1.86
ATXN3-239ENST00000556315 LALBAP00709 142 aa3.44□□□□□ -1.86
ATXN3-239ENST00000556315 GIG44P09565 113 aaPredicted RBP3.44□□□□□ -1.86
ATXN3-239ENST00000556315 CD3GP09693 182 aa3.44□□□□□ -1.86
ATXN3-239ENST00000556315 CD37P11049 281 aa3.44□□□□□ -1.86
ATXN3-239ENST00000556315 CELP19835 753 aa3.44□□□□□ -1.86
ATXN3-239ENST00000556315 TMEM50BP56557 158 aa3.44□□□□□ -1.86
ATXN3-239ENST00000556315 AP3S2P59780 193 aa3.44□□□□□ -1.86
ATXN3-239ENST00000556315 RPL8P62917 257 aaKnown RBP3.44□□□□□ -1.86
ATXN3-239ENST00000556315 MRPS10P82664 201 aaKnown RBP3.44□□□□□ -1.86
ATXN3-239ENST00000556315 QRFPP83859 136 aa3.44□□□□□ -1.86
ATXN3-239ENST00000556315 FABP5Q01469 135 aa3.44□□□□□ -1.86
ATXN3-239ENST00000556315 UNC119Q13432 240 aa3.44□□□□□ -1.86
ATXN3-239ENST00000556315 IGSF11Q5DX21 431 aa3.44□□□□□ -1.86
ATXN3-239ENST00000556315 C22orf42Q6IC83 251 aa3.44□□□□□ -1.86
ATXN3-239ENST00000556315 MORN3Q6PF18 240 aaPredicted RBP3.44□□□□□ -1.86
ATXN3-239ENST00000556315 CNIH2Q6PI25 160 aa3.44□□□□□ -1.86
ATXN3-239ENST00000556315 STHQ8IWL8 128 aa3.44□□□□□ -1.86
ATXN3-239ENST00000556315 SLC7A5P1Q8MH63 180 aa3.44□□□□□ -1.86
ATXN3-239ENST00000556315 VKORC1L1Q8N0U8 176 aa3.44□□□□□ -1.86
ATXN3-239ENST00000556315 PUSL1Q8N0Z8 303 aaKnown RBP3.44□□□□□ -1.86
ATXN3-239ENST00000556315 GIMAP1Q8WWP7 306 aa3.44□□□□□ -1.86
ATXN3-239ENST00000556315 ASB13Q8WXK3 278 aa3.44□□□□□ -1.86
ATXN3-239ENST00000556315 BSCL2Q96G97 398 aaPredicted RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms