RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 RNF213Q63HN8 5207 aa4.85□□□□□ -1.63
ATXN3-236ENST00000556220 IGHV3OR16-8A0A075B7F1 116 aa4.85□□□□□ -1.63
ATXN3-236ENST00000556220 IGKV1D-13A0A0B4J2D9 117 aa4.85□□□□□ -1.63
ATXN3-236ENST00000556220 IGHV7-4-1A0A0J9YVY3 117 aa4.85□□□□□ -1.63
ATXN3-236ENST00000556220 NBDYA0A0U1RRE5 68 aa4.85□□□□□ -1.63
ATXN3-236ENST00000556220 OR2T8A6NH00 312 aa4.85□□□□□ -1.63
ATXN3-236ENST00000556220 DFFBO76075 338 aa4.85□□□□□ -1.63
ATXN3-236ENST00000556220 KBTBD11O94819 623 aa4.85□□□□□ -1.63
ATXN3-236ENST00000556220 PTTG1O95997 202 aa4.85□□□□□ -1.63
ATXN3-236ENST00000556220 REG1AP05451 166 aa4.85□□□□□ -1.63
ATXN3-236ENST00000556220 FCGR3AP08637 254 aa4.85□□□□□ -1.63
ATXN3-236ENST00000556220 UBBP0CG47 229 aa4.85□□□□□ -1.63
ATXN3-236ENST00000556220 IGKV1-13P0DP09 117 aa4.85□□□□□ -1.63
ATXN3-236ENST00000556220 CXCL3P19876 107 aa4.85□□□□□ -1.63
ATXN3-236ENST00000556220 HLA-DMAP28067 261 aa4.85□□□□□ -1.63
ATXN3-236ENST00000556220 BCAP31P51572 246 aa4.85□□□□□ -1.63
ATXN3-236ENST00000556220 DEFB131AP59861 70 aa4.85□□□□□ -1.63
ATXN3-236ENST00000556220 UBE2MP61081 183 aaKnown RBP4.85□□□□□ -1.63
ATXN3-236ENST00000556220 RGS21Q2M5E4 152 aa4.85□□□□□ -1.63
ATXN3-236ENST00000556220 SPSB3Q6PJ21 355 aa4.85□□□□□ -1.63
ATXN3-236ENST00000556220 VKORC1L1Q8N0U8 176 aa4.85□□□□□ -1.63
ATXN3-236ENST00000556220 PUSL1Q8N0Z8 303 aaKnown RBP4.85□□□□□ -1.63
ATXN3-236ENST00000556220 CSNK1G2-AS1Q8NCQ2 148 aa4.85□□□□□ -1.63
ATXN3-236ENST00000556220 BEST4Q8NFU0 473 aa4.85□□□□□ -1.63
ATXN3-236ENST00000556220 OR11H7Q8NGC8 314 aa4.85□□□□□ -1.63
ATXN3-236ENST00000556220 OR51S1Q8NGJ8 323 aa4.85□□□□□ -1.63
ATXN3-236ENST00000556220 OR4A4PQ8NGN8 299 aa4.85□□□□□ -1.63
ATXN3-236ENST00000556220 VSTM2AQ8TAG5 236 aa4.85□□□□□ -1.63
ATXN3-236ENST00000556220 TMEM167AQ8TBQ9 72 aa4.85□□□□□ -1.63
ATXN3-236ENST00000556220 VN1R17PQ8TDU5 208 aa4.85□□□□□ -1.63
ATXN3-236ENST00000556220 GIMAP1Q8WWP7 306 aa4.85□□□□□ -1.63
ATXN3-236ENST00000556220 BSCL2Q96G97 398 aaPredicted RBP4.85□□□□□ -1.63
ATXN3-236ENST00000556220 TMEM14BQ9NUH8 114 aa4.85□□□□□ -1.63
ATXN3-236ENST00000556220 THYN1Q9P016 225 aa4.85□□□□□ -1.63
ATXN3-236ENST00000556220 ALG5Q9Y673 324 aa4.85□□□□□ -1.63
ATXN3-236ENST00000556220 LRP1Q07954 4544 aaKnown RBP4.84□□□□□ -1.63
ATXN3-236ENST00000556220 TRAV6A0A075B6T7 132 aa4.84□□□□□ -1.63
ATXN3-236ENST00000556220 TRBV6-7A0A0A0MS04 114 aa4.84□□□□□ -1.63
ATXN3-236ENST00000556220 SMLR1H3BR10 107 aa4.84□□□□□ -1.63
ATXN3-236ENST00000556220 BET1O15155 118 aa4.84□□□□□ -1.63
ATXN3-236ENST00000556220 FCGR3BO75015 233 aa4.84□□□□□ -1.63
ATXN3-236ENST00000556220 PMP2P02689 132 aa4.84□□□□□ -1.63
ATXN3-236ENST00000556220 TCRBP04435 133 aa4.84□□□□□ -1.63
ATXN3-236ENST00000556220 SPP1P10451 314 aa4.84□□□□□ -1.63
ATXN3-236ENST00000556220 ANXA7P20073 488 aaKnown RBP4.84□□□□□ -1.63
ATXN3-236ENST00000556220 C4BPBP20851 252 aa4.84□□□□□ -1.63
ATXN3-236ENST00000556220 PRSS3P35030 304 aa4.84□□□□□ -1.63
ATXN3-236ENST00000556220 HRH1P35367 487 aa4.84□□□□□ -1.63
ATXN3-236ENST00000556220 XGP55808 180 aa4.84□□□□□ -1.63
ATXN3-236ENST00000556220 BRWD1-AS2P59051 145 aa4.84□□□□□ -1.63
ATXN3-236ENST00000556220 SUPT4H1P63272 117 aaKnown RBP4.84□□□□□ -1.63
ATXN3-236ENST00000556220 RAB32Q13637 225 aa4.84□□□□□ -1.63
ATXN3-236ENST00000556220 ARFRP1Q13795 201 aa4.84□□□□□ -1.63
ATXN3-236ENST00000556220 IGSF11Q5DX21 431 aa4.84□□□□□ -1.63
ATXN3-236ENST00000556220 Q5VSD8 79 aa4.84□□□□□ -1.63
ATXN3-236ENST00000556220 TRPT1Q86TN4 253 aaKnown RBP4.84□□□□□ -1.63
ATXN3-236ENST00000556220 HOGA1Q86XE5 327 aa4.84□□□□□ -1.63
ATXN3-236ENST00000556220 FAM219AQ8IW50 185 aa4.84□□□□□ -1.63
ATXN3-236ENST00000556220 TMEM229BQ8NBD8 167 aa4.84□□□□□ -1.63
ATXN3-236ENST00000556220 TMEM116Q8NCL8 245 aa4.84□□□□□ -1.63
ATXN3-236ENST00000556220 OR10J5Q8NHC4 309 aa4.84□□□□□ -1.63
ATXN3-236ENST00000556220 FRZBQ92765 325 aa4.84□□□□□ -1.63
ATXN3-236ENST00000556220 RAB3CQ96E17 227 aa4.84□□□□□ -1.63
ATXN3-236ENST00000556220 S100A16Q96FQ6 103 aaKnown RBP4.84□□□□□ -1.63
ATXN3-236ENST00000556220 ATP6V0BQ99437 205 aa4.84□□□□□ -1.63
ATXN3-236ENST00000556220 C12orf4Q9NQ89 552 aa4.84□□□□□ -1.63
ATXN3-236ENST00000556220 CLEC5AQ9NY25 188 aa4.84□□□□□ -1.63
ATXN3-236ENST00000556220 HSF4Q9ULV5 492 aa4.84□□□□□ -1.63
ATXN3-236ENST00000556220 RBM7Q9Y580 266 aaKnown RBP4.84□□□□□ -1.63
ATXN3-236ENST00000556220 NACAE9PAV3 2078 aa4.84□□□□□ -1.64
ATXN3-236ENST00000556220 IGHV3-49A0A0A0MS15 119 aa4.83□□□□□ -1.64
ATXN3-236ENST00000556220 TRAV14DV4A0A0A6YYC5 116 aa4.83□□□□□ -1.64
ATXN3-236ENST00000556220 A0A0A6YYH2 397 aa4.83□□□□□ -1.64
ATXN3-236ENST00000556220 A6NJ64 397 aa4.83□□□□□ -1.64
ATXN3-236ENST00000556220 DNASE2O00115 360 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-236ENST00000556220 FABP7O15540 132 aa4.83□□□□□ -1.64
ATXN3-236ENST00000556220 NDUFB6O95139 128 aa4.83□□□□□ -1.64
ATXN3-236ENST00000556220 DIRAS3O95661 229 aa4.83□□□□□ -1.64
ATXN3-236ENST00000556220 CD5P06127 495 aa4.83□□□□□ -1.64
ATXN3-236ENST00000556220 SPART-AS1P0CW21 52 aa4.83□□□□□ -1.64
ATXN3-236ENST00000556220 HLA-GP17693 338 aa4.83□□□□□ -1.64
ATXN3-236ENST00000556220 RPL8P62917 257 aaKnown RBP4.83□□□□□ -1.64
ATXN3-236ENST00000556220 EIF4EBP1Q13541 118 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-236ENST00000556220 FCN2Q15485 313 aa4.83□□□□□ -1.64
ATXN3-236ENST00000556220 TRIM16LQ309B1 348 aa4.83□□□□□ -1.64
ATXN3-236ENST00000556220 SUMO4Q6EEV6 95 aa4.83□□□□□ -1.64
ATXN3-236ENST00000556220 ZNF66Q6ZN08 573 aa4.83□□□□□ -1.64
ATXN3-236ENST00000556220 FAM24BQ8N5W8 94 aa4.83□□□□□ -1.64
ATXN3-236ENST00000556220 OR56B1Q8NGI3 324 aa4.83□□□□□ -1.64
ATXN3-236ENST00000556220 OR6F1Q8NGZ6 308 aa4.83□□□□□ -1.64
ATXN3-236ENST00000556220 LHFPL5Q8TAF8 219 aa4.83□□□□□ -1.64
ATXN3-236ENST00000556220 OR10C1Q96KK4 312 aa4.83□□□□□ -1.64
ATXN3-236ENST00000556220 CMSS1Q9BQ75 279 aaKnown RBP4.83□□□□□ -1.64
ATXN3-236ENST00000556220 RTBDNQ9BSG5 229 aaPredicted RBP4.83□□□□□ -1.64
ATXN3-236ENST00000556220 CABLES2Q9BTV7 478 aa4.83□□□□□ -1.64
ATXN3-236ENST00000556220 MS4A6AQ9H2W1 248 aa4.83□□□□□ -1.64
ATXN3-236ENST00000556220 SCPEP1Q9HB40 452 aa4.83□□□□□ -1.64
ATXN3-236ENST00000556220 NUDT15Q9NV35 164 aa4.83□□□□□ -1.64
ATXN3-236ENST00000556220 PRELID3BQ9Y3B1 194 aa4.83□□□□□ -1.64
ATXN3-236ENST00000556220 TMED3Q9Y3Q3 217 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 510.5 ms