RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 PPOXP50336 477 aa12.12□□□□□ -0.47
NEK9-209ENST00000556170 IGFL3Q6UXB1 125 aa12.12□□□□□ -0.47
NEK9-209ENST00000556170 ZNF114Q8NC26 417 aa12.12□□□□□ -0.47
NEK9-209ENST00000556170 OR52E5Q8NH55 327 aa12.12□□□□□ -0.47
NEK9-209ENST00000556170 HSPB9Q9BQS6 159 aa12.12□□□□□ -0.47
NEK9-209ENST00000556170 B9A039 149 aa12.12□□□□□ -0.47
NEK9-209ENST00000556170 MEF2CQ06413 473 aaPredicted RBP12.12□□□□□ -0.47
NEK9-209ENST00000556170 C19orf35Q6ZS72 473 aa12.12□□□□□ -0.47
NEK9-209ENST00000556170 Q8TCH9 128 aa12.12□□□□□ -0.47
NEK9-209ENST00000556170 DOPEY2Q9Y3R5 2298 aa12.12□□□□□ -0.47
NEK9-209ENST00000556170 IGLV3-9A0A075B6K5 115 aa12.11□□□□□ -0.47
NEK9-209ENST00000556170 A0A1B0GUS0 222 aa12.11□□□□□ -0.47
NEK9-209ENST00000556170 AMBPP02760 352 aa12.11□□□□□ -0.47
NEK9-209ENST00000556170 WNT2P09544 360 aa12.11□□□□□ -0.47
NEK9-209ENST00000556170 CEACAM8P31997 349 aaPredicted RBP12.11□□□□□ -0.47
NEK9-209ENST00000556170 CD69Q07108 199 aa12.11□□□□□ -0.47
NEK9-209ENST00000556170 SLC25A48Q6ZT89 311 aaKnown RBP12.11□□□□□ -0.47
NEK9-209ENST00000556170 ST6GALNAC3Q8NDV1 305 aa12.11□□□□□ -0.47
NEK9-209ENST00000556170 ADAMTS20P59510 1910 aa12.11□□□□□ -0.47
NEK9-209ENST00000556170 CHEK1O14757 476 aa12.11□□□□□ -0.47
NEK9-209ENST00000556170 GNG7O60262 68 aa12.11□□□□□ -0.47
NEK9-209ENST00000556170 RNASEKQ6P5S7 137 aaKnown RBP12.11□□□□□ -0.47
NEK9-209ENST00000556170 PRSS33Q8NF86 280 aa12.11□□□□□ -0.47
NEK9-209ENST00000556170 PERPQ96FX8 193 aa12.11□□□□□ -0.47
NEK9-209ENST00000556170 TXNDC17Q9BRA2 123 aa12.11□□□□□ -0.47
NEK9-209ENST00000556170 SLC25A33Q9BSK2 321 aa12.11□□□□□ -0.47
NEK9-209ENST00000556170 CLEC7AQ9BXN2 247 aa12.11□□□□□ -0.47
NEK9-209ENST00000556170 FOXA2Q9Y261 457 aaPredicted RBP12.11□□□□□ -0.47
NEK9-209ENST00000556170 BEND2Q8NDZ0 799 aa12.11□□□□□ -0.47
NEK9-209ENST00000556170 LINC00479Q96M42 142 aa12.11□□□□□ -0.47
NEK9-209ENST00000556170 ALKBH7Q9BT30 221 aaPredicted RBP12.11□□□□□ -0.47
NEK9-209ENST00000556170 TMUB1Q9BVT8 246 aa12.11□□□□□ -0.47
NEK9-209ENST00000556170 E7EQL1 145 aa12.11□□□□□ -0.47
NEK9-209ENST00000556170 TNRC18O15417 2968 aaPredicted RBP12.11□□□□□ -0.47
NEK9-209ENST00000556170 GNG5P63218 68 aa12.11□□□□□ -0.47
NEK9-209ENST00000556170 FAM169BQ8N8A8 192 aa12.11□□□□□ -0.47
NEK9-209ENST00000556170 TMSB15BA0A087X1C1 80 aa12.1□□□□□ -0.47
NEK9-209ENST00000556170 CSN3P07498 182 aa12.1□□□□□ -0.47
NEK9-209ENST00000556170 LINC00614P0C842 121 aa12.1□□□□□ -0.47
NEK9-209ENST00000556170 GZMBP10144 247 aa12.1□□□□□ -0.47
NEK9-209ENST00000556170 GTF2H5Q6ZYL4 71 aa12.1□□□□□ -0.47
NEK9-209ENST00000556170 EAF1Q96JC9 268 aaPredicted RBP12.1□□□□□ -0.47
NEK9-209ENST00000556170 ARL2-SNX15V9GYD0 113 aa12.1□□□□□ -0.47
NEK9-209ENST00000556170 TEX38Q6PEX7 206 aa12.1□□□□□ -0.47
NEK9-209ENST00000556170 IGFBPL1Q8WX77 278 aa12.1□□□□□ -0.47
NEK9-209ENST00000556170 SERTM2A0A1B0GWG4 89 aa12.09□□□□□ -0.47
NEK9-209ENST00000556170 CFHR2P36980 270 aa12.09□□□□□ -0.47
NEK9-209ENST00000556170 NEU1Q99519 415 aa12.09□□□□□ -0.47
NEK9-209ENST00000556170 NOTCH2Q04721 2471 aa12.09□□□□□ -0.47
NEK9-209ENST00000556170 H0YJW9 148 aa12.09□□□□□ -0.47
NEK9-209ENST00000556170 CT45A10P0DMU9 189 aa12.09□□□□□ -0.47
NEK9-209ENST00000556170 HTR1DP28221 377 aa12.09□□□□□ -0.47
NEK9-209ENST00000556170 TMPRSS3P57727 454 aa12.09□□□□□ -0.47
NEK9-209ENST00000556170 TMEM133Q9H2Q1 129 aa12.09□□□□□ -0.47
NEK9-209ENST00000556170 TMEM242Q9NWH2 141 aa12.09□□□□□ -0.47
NEK9-209ENST00000556170 K7EQM0 130 aa12.09□□□□□ -0.47
NEK9-209ENST00000556170 IGHV3-23P01764 117 aa12.09□□□□□ -0.47
NEK9-209ENST00000556170 COL8A1P27658 744 aa12.09□□□□□ -0.47
NEK9-209ENST00000556170 LGALS7P47929 136 aa12.09□□□□□ -0.47
NEK9-209ENST00000556170 TDGF1P3P51864 188 aa12.09□□□□□ -0.47
NEK9-209ENST00000556170 SELENOTP62341 195 aa12.09□□□□□ -0.47
NEK9-209ENST00000556170 PRNTQ86SH4 94 aa12.09□□□□□ -0.47
NEK9-209ENST00000556170 SCGB2A1O75556 95 aa12.08□□□□□ -0.48
NEK9-209ENST00000556170 CEACAM3P40198 252 aa12.08□□□□□ -0.48
NEK9-209ENST00000556170 OR4F17Q8NGA8 305 aa12.08□□□□□ -0.48
NEK9-209ENST00000556170 RNF2Q99496 336 aa12.08□□□□□ -0.48
NEK9-209ENST00000556170 HCFC1P51610 2035 aa12.08□□□□□ -0.48
NEK9-209ENST00000556170 LOC400499M0QZD8 3231 aa12.08□□□□□ -0.48
NEK9-209ENST00000556170 PFN1P07737 140 aaKnown RBP12.08□□□□□ -0.48
NEK9-209ENST00000556170 C1orf229Q6ZS94 237 aaPredicted RBP12.08□□□□□ -0.48
NEK9-209ENST00000556170 TMEM256Q8N2U0 113 aa12.08□□□□□ -0.48
NEK9-209ENST00000556170 TPSG1Q9NRR2 321 aa12.08□□□□□ -0.48
NEK9-209ENST00000556170 TMEM14BQ9NUH8 114 aa12.08□□□□□ -0.48
NEK9-209ENST00000556170 GRNP28799 593 aaKnown RBP12.08□□□□□ -0.48
NEK9-209ENST00000556170 CDKN1AP38936 164 aa12.08□□□□□ -0.48
NEK9-209ENST00000556170 GPR6P46095 362 aaPredicted RBP12.08□□□□□ -0.48
NEK9-209ENST00000556170 RPL11P62913 178 aaKnown RBP12.08□□□□□ -0.48
NEK9-209ENST00000556170 LY6DQ14210 128 aa12.08□□□□□ -0.48
NEK9-209ENST00000556170 GUSBP1Q15486 140 aa12.08□□□□□ -0.48
NEK9-209ENST00000556170 TANC2Q9HCD6 1990 aa12.08□□□□□ -0.48
NEK9-209ENST00000556170 WDFY3Q8IZQ1 3526 aa12.08□□□□□ -0.48
NEK9-209ENST00000556170 ARHGAP32A7KAX9 2087 aa12.07□□□□□ -0.48
NEK9-209ENST00000556170 FAM90A9PA6NNJ1 464 aa12.07□□□□□ -0.48
NEK9-209ENST00000556170 DIRC3C9JPN6 131 aa12.07□□□□□ -0.48
NEK9-209ENST00000556170 IGHV1-8P0DP01 117 aa12.07□□□□□ -0.48
NEK9-209ENST00000556170 AREGP15514 252 aa12.07□□□□□ -0.48
NEK9-209ENST00000556170 PMS2P5A8MQ11 134 aa12.07□□□□□ -0.48
NEK9-209ENST00000556170 NBEAP1P0C6P0 100 aa12.07□□□□□ -0.48
NEK9-209ENST00000556170 NPPCP23582 126 aa12.07□□□□□ -0.48
NEK9-209ENST00000556170 SRIP30626 198 aa12.07□□□□□ -0.48
NEK9-209ENST00000556170 GATA4P43694 442 aa12.07□□□□□ -0.48
NEK9-209ENST00000556170 KLF17Q5JT82 389 aaPredicted RBP12.07□□□□□ -0.48
NEK9-209ENST00000556170 HIGD1AQ9Y241 93 aa12.07□□□□□ -0.48
NEK9-209ENST00000556170 P01737 135 aa12.07□□□□□ -0.48
NEK9-209ENST00000556170 RNASE2P10153 161 aaKnown RBP12.07□□□□□ -0.48
NEK9-209ENST00000556170 CNTFRP26992 372 aa12.07□□□□□ -0.48
NEK9-209ENST00000556170 CSN1S1P47710 185 aa12.07□□□□□ -0.48
NEK9-209ENST00000556170 ECSCRQ19T08 205 aa12.07□□□□□ -0.48
NEK9-209ENST00000556170 IGHV3OR16-13A0A075B7E8 117 aa12.06□□□□□ -0.48
NEK9-209ENST00000556170 IGHV3-74A0A0B4J1X5 117 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms