RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 GNB1P62873 340 aa6.57□□□□□ -1.36
ATXN3-235ENST00000556082 FXYD3Q14802 87 aa6.57□□□□□ -1.36
ATXN3-235ENST00000556082 PLGLAQ15195 96 aa6.57□□□□□ -1.36
ATXN3-235ENST00000556082 TMEM241Q24JQ0 296 aa6.57□□□□□ -1.36
ATXN3-235ENST00000556082 FAM78BQ5VT40 261 aa6.57□□□□□ -1.36
ATXN3-235ENST00000556082 CTRB2Q6GPI1 263 aa6.57□□□□□ -1.36
ATXN3-235ENST00000556082 DYNAPQ8N1N2 210 aa6.57□□□□□ -1.36
ATXN3-235ENST00000556082 OR1L4Q8NGR5 311 aa6.57□□□□□ -1.36
ATXN3-235ENST00000556082 OR4F5Q8NH21 305 aa6.57□□□□□ -1.36
ATXN3-235ENST00000556082 OR4X1Q8NH49 305 aa6.57□□□□□ -1.36
ATXN3-235ENST00000556082 ACY3Q96HD9 319 aa6.57□□□□□ -1.36
ATXN3-235ENST00000556082 YPEL4Q96NS1 127 aa6.57□□□□□ -1.36
ATXN3-235ENST00000556082 OR4F4Q96R69 305 aa6.57□□□□□ -1.36
ATXN3-235ENST00000556082 PFDN5Q99471 154 aa6.57□□□□□ -1.36
ATXN3-235ENST00000556082 SLC25A33Q9BSK2 321 aa6.57□□□□□ -1.36
ATXN3-235ENST00000556082 CTDSP1Q9GZU7 261 aa6.57□□□□□ -1.36
ATXN3-235ENST00000556082 TMEM167BQ9NRX6 74 aa6.57□□□□□ -1.36
ATXN3-235ENST00000556082 NAT8Q9UHE5 227 aa6.57□□□□□ -1.36
ATXN3-235ENST00000556082 CACNA1BQ00975 2339 aa6.57□□□□□ -1.36
ATXN3-235ENST00000556082 HRNRQ86YZ3 2850 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-235ENST00000556082 USP24Q9UPU5 2620 aa6.57□□□□□ -1.36
ATXN3-235ENST00000556082 IGHV4-61A0A0C4DH41 118 aa6.56□□□□□ -1.36
ATXN3-235ENST00000556082 CENPVL3A0A0U1RRI6 287 aa6.56□□□□□ -1.36
ATXN3-235ENST00000556082 LOC105371267A0A1B0GV96 52 aa6.56□□□□□ -1.36
ATXN3-235ENST00000556082 EIF3GO75821 320 aaKnown RBP eCLIP6.56□□□□□ -1.36
ATXN3-235ENST00000556082 REG1AP05451 166 aa6.56□□□□□ -1.36
ATXN3-235ENST00000556082 DEFA4P12838 97 aa6.56□□□□□ -1.36
ATXN3-235ENST00000556082 COX6B1P14854 86 aa6.56□□□□□ -1.36
ATXN3-235ENST00000556082 RND2P52198 227 aa6.56□□□□□ -1.36
ATXN3-235ENST00000556082 SRSF1Q07955 248 aaKnown RBP eCLIP6.56□□□□□ -1.36
ATXN3-235ENST00000556082 HES1Q14469 280 aa6.56□□□□□ -1.36
ATXN3-235ENST00000556082 SPATA31B1PQ5VZV4 182 aa6.56□□□□□ -1.36
ATXN3-235ENST00000556082 MIR17HGQ75NE6 70 aa6.56□□□□□ -1.36
ATXN3-235ENST00000556082 TTC9CQ8N5M4 171 aa6.56□□□□□ -1.36
ATXN3-235ENST00000556082 STXBP6Q8NFX7 210 aa6.56□□□□□ -1.36
ATXN3-235ENST00000556082 TMEM37Q8WXS4 190 aa6.56□□□□□ -1.36
ATXN3-235ENST00000556082 C11orf52Q96A22 123 aa6.56□□□□□ -1.36
ATXN3-235ENST00000556082 FAM167A-AS1Q96KT0 104 aa6.56□□□□□ -1.36
ATXN3-235ENST00000556082 ZNF48Q96MX3 618 aaPredicted RBP6.56□□□□□ -1.36
ATXN3-235ENST00000556082 SMIM7Q9BQ49 75 aa6.56□□□□□ -1.36
ATXN3-235ENST00000556082 C20orf24Q9BUV8 137 aa6.56□□□□□ -1.36
ATXN3-235ENST00000556082 TNFRSF19Q9NS68 423 aa6.56□□□□□ -1.36
ATXN3-235ENST00000556082 MRPL36Q9P0J6 103 aaKnown RBP6.56□□□□□ -1.36
ATXN3-235ENST00000556082 DMRT1Q9Y5R6 373 aa6.56□□□□□ -1.36
ATXN3-235ENST00000556082 A0A1W2PRE2 83 aa6.55□□□□□ -1.36
ATXN3-235ENST00000556082 OR2C1O95371 312 aa6.55□□□□□ -1.36
ATXN3-235ENST00000556082 HLA-DRB1P01911 266 aa6.55□□□□□ -1.36
ATXN3-235ENST00000556082 FABP1P07148 127 aa6.55□□□□□ -1.36
ATXN3-235ENST00000556082 SLC25A16P16260 332 aa6.55□□□□□ -1.36
ATXN3-235ENST00000556082 TMEM11P17152 192 aa6.55□□□□□ -1.36
ATXN3-235ENST00000556082 NPPCP23582 126 aa6.55□□□□□ -1.36
ATXN3-235ENST00000556082 GATA3P23771 443 aa6.55□□□□□ -1.36
ATXN3-235ENST00000556082 SAA4P35542 130 aa6.55□□□□□ -1.36
ATXN3-235ENST00000556082 CEBPGP53567 150 aa6.55□□□□□ -1.36
ATXN3-235ENST00000556082 BPIFB3P59826 476 aa6.55□□□□□ -1.36
ATXN3-235ENST00000556082 CX3CL1P78423 397 aa6.55□□□□□ -1.36
ATXN3-235ENST00000556082 IQCF2Q8IXL9 164 aa6.55□□□□□ -1.36
ATXN3-235ENST00000556082 C17orf50Q8WW18 174 aa6.55□□□□□ -1.36
ATXN3-235ENST00000556082 TMEM190Q8WZ59 177 aa6.55□□□□□ -1.36
ATXN3-235ENST00000556082 ARPC1AQ92747 370 aa6.55□□□□□ -1.36
ATXN3-235ENST00000556082 ZNF503Q96F45 646 aa6.55□□□□□ -1.36
ATXN3-235ENST00000556082 TMEM68Q96MH6 324 aa6.55□□□□□ -1.36
ATXN3-235ENST00000556082 MEGF9Q9H1U4 602 aa6.55□□□□□ -1.36
ATXN3-235ENST00000556082 PARLQ9H300 379 aa6.55□□□□□ -1.36
ATXN3-235ENST00000556082 RELNP78509 3460 aa6.54□□□□□ -1.36
ATXN3-235ENST00000556082 IGLV11-55A0A075B6I3 123 aa6.54□□□□□ -1.36
ATXN3-235ENST00000556082 IGHV4-30-2A0A087WSY4 118 aa6.54□□□□□ -1.36
ATXN3-235ENST00000556082 TRAV30A0A087WSZ9 112 aa6.54□□□□□ -1.36
ATXN3-235ENST00000556082 IGHV1-69DA0A0B4J2H0 117 aa6.54□□□□□ -1.36
ATXN3-235ENST00000556082 A0A1W2PRD5 423 aa6.54□□□□□ -1.36
ATXN3-235ENST00000556082 A0A1W2PRF3 423 aa6.54□□□□□ -1.36
ATXN3-235ENST00000556082 A0A1W2PRM7 423 aa6.54□□□□□ -1.36
ATXN3-235ENST00000556082 K7EIM0 57 aa6.54□□□□□ -1.36
ATXN3-235ENST00000556082 COX7A2P2O60397 106 aa6.54□□□□□ -1.36
ATXN3-235ENST00000556082 IGHV1-69P01742 117 aa6.54□□□□□ -1.36
ATXN3-235ENST00000556082 PLA2G1BP04054 148 aaKnown RBP6.54□□□□□ -1.36
ATXN3-235ENST00000556082 IGLC1P0CG04 106 aa6.54□□□□□ -1.36
ATXN3-235ENST00000556082 CD99P14209 185 aa6.54□□□□□ -1.36
ATXN3-235ENST00000556082 ATF4P18848 351 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-235ENST00000556082 GATA2P23769 480 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-235ENST00000556082 AKR1C3P42330 323 aa6.54□□□□□ -1.36
ATXN3-235ENST00000556082 FLI1Q01543 452 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-235ENST00000556082 ZNF90Q03938 601 aa6.54□□□□□ -1.36
ATXN3-235ENST00000556082 ASPHD1Q5U4P2 390 aa6.54□□□□□ -1.36
ATXN3-235ENST00000556082 C10orf113Q5VZT2 155 aa6.54□□□□□ -1.36
ATXN3-235ENST00000556082 CST9LP1Q5W188 147 aa6.54□□□□□ -1.36
ATXN3-235ENST00000556082 PATE2Q6UY27 113 aa6.54□□□□□ -1.36
ATXN3-235ENST00000556082 Q8N9W7 124 aa6.54□□□□□ -1.36
ATXN3-235ENST00000556082 HIST1H2BAQ96A08 127 aa6.54□□□□□ -1.36
ATXN3-235ENST00000556082 UHRF2Q96PU4 802 aa6.54□□□□□ -1.36
ATXN3-235ENST00000556082 SSX3Q99909 188 aa6.54□□□□□ -1.36
ATXN3-235ENST00000556082 TCEAL7Q9BRU2 100 aa6.54□□□□□ -1.36
ATXN3-235ENST00000556082 YTHDF2Q9Y5A9 579 aaKnown RBP6.54□□□□□ -1.36
ATXN3-235ENST00000556082 LY96Q9Y6Y9 160 aa6.54□□□□□ -1.36
ATXN3-235ENST00000556082 SMG1Q96Q15 3661 aaKnown RBP6.54□□□□□ -1.36
ATXN3-235ENST00000556082 IGHV7-81A0A0B4J1V7 117 aa6.53□□□□□ -1.36
ATXN3-235ENST00000556082 TRAV20A0A0B4J274 112 aa6.53□□□□□ -1.36
ATXN3-235ENST00000556082 NCBP2LA6PVI3 153 aaKnown RBP6.53□□□□□ -1.36
ATXN3-235ENST00000556082 B4DSR2 109 aa6.53□□□□□ -1.36
ATXN3-235ENST00000556082 CLDN34H7C241 214 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms