RNA–Protein interactions for RNA: ENST00000555612.5

SYNE2-220, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 6,766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-220ENST00000555612 ZNF98A6NK75 572 aa6.77□□□□□ -1.33
SYNE2-220ENST00000555612 OOSP1A8MZH6 123 aa6.77□□□□□ -1.33
SYNE2-220ENST00000555612 NDPQ00604 133 aa6.77□□□□□ -1.33
SYNE2-220ENST00000555612 ACTL10Q5JWF8 245 aa6.77□□□□□ -1.33
SYNE2-220ENST00000555612 FAM110DQ8TAY7 271 aaPredicted RBP6.77□□□□□ -1.33
SYNE2-220ENST00000555612 RPP21Q9H633 154 aaKnown RBP6.77□□□□□ -1.33
SYNE2-220ENST00000555612 RALGAPA2Q2PPJ7 1873 aa6.77□□□□□ -1.33
SYNE2-220ENST00000555612 DOCK6Q96HP0 2047 aa6.77□□□□□ -1.33
SYNE2-220ENST00000555612 FABP5P3A8MUU1 101 aa6.77□□□□□ -1.33
SYNE2-220ENST00000555612 PRB1P04280 392 aa6.77□□□□□ -1.33
SYNE2-220ENST00000555612 CR1LQ2VPA4 569 aa6.77□□□□□ -1.33
SYNE2-220ENST00000555612 ZNF324BQ6AW86 544 aaPredicted RBP6.77□□□□□ -1.33
SYNE2-220ENST00000555612 ASCL4Q6XD76 172 aa6.77□□□□□ -1.33
SYNE2-220ENST00000555612 MBNL3Q9NUK0 354 aaKnown RBP6.77□□□□□ -1.33
SYNE2-220ENST00000555612 OTOFQ9HC10 1997 aa6.77□□□□□ -1.33
SYNE2-220ENST00000555612 A0A1B0GUT8 65 aa6.77□□□□□ -1.33
SYNE2-220ENST00000555612 PSCAO43653 123 aa6.77□□□□□ -1.33
SYNE2-220ENST00000555612 BTCP35070 178 aa6.77□□□□□ -1.33
SYNE2-220ENST00000555612 RNF166Q96A37 237 aaPredicted RBP6.77□□□□□ -1.33
SYNE2-220ENST00000555612 LRTM2Q8N967 370 aa6.77□□□□□ -1.33
SYNE2-220ENST00000555612 A0A087X0M5 115 aa6.77□□□□□ -1.33
SYNE2-220ENST00000555612 A0A1B0GX30 115 aa6.77□□□□□ -1.33
SYNE2-220ENST00000555612 TMEM250H0YL14 139 aa6.77□□□□□ -1.33
SYNE2-220ENST00000555612 CBLN1P23435 193 aa6.77□□□□□ -1.33
SYNE2-220ENST00000555612 ASCL2Q99929 193 aa6.77□□□□□ -1.33
SYNE2-220ENST00000555612 GPR61Q9BZJ8 451 aa6.77□□□□□ -1.33
SYNE2-220ENST00000555612 OR11H12B2RN74 326 aa6.76□□□□□ -1.33
SYNE2-220ENST00000555612 SPATA45Q537H7 98 aa6.76□□□□□ -1.33
SYNE2-220ENST00000555612 IL17RELQ6ZVW7 336 aa6.76□□□□□ -1.33
SYNE2-220ENST00000555612 CHD5Q8TDI0 1954 aa6.76□□□□□ -1.33
SYNE2-220ENST00000555612 LCTP09848 1927 aa6.76□□□□□ -1.33
SYNE2-220ENST00000555612 TMEM50AO95807 157 aa6.76□□□□□ -1.33
SYNE2-220ENST00000555612 IGHV3-53P01767 116 aa6.76□□□□□ -1.33
SYNE2-220ENST00000555612 CD55P08174 381 aa6.76□□□□□ -1.33
SYNE2-220ENST00000555612 SCGB1A1P11684 91 aa6.76□□□□□ -1.33
SYNE2-220ENST00000555612 GLRX5Q86SX6 157 aa6.76□□□□□ -1.33
SYNE2-220ENST00000555612 TMEM183AQ8IXX5 376 aa6.76□□□□□ -1.33
SYNE2-220ENST00000555612 UBE2E2Q96LR5 201 aa6.76□□□□□ -1.33
SYNE2-220ENST00000555612 TRAV8-6A0A0B4J262 113 aa6.76□□□□□ -1.33
SYNE2-220ENST00000555612 BUB1B-PAK6H3BSN5 160 aa6.76□□□□□ -1.33
SYNE2-220ENST00000555612 OVOL1O14753 267 aa6.76□□□□□ -1.33
SYNE2-220ENST00000555612 MPZP25189 248 aa6.76□□□□□ -1.33
SYNE2-220ENST00000555612 C5orf64Q2M2E5 130 aa6.76□□□□□ -1.33
SYNE2-220ENST00000555612 ALPK2Q86TB3 2170 aa6.76□□□□□ -1.33
SYNE2-220ENST00000555612 DNAL4O96015 105 aa6.76□□□□□ -1.33
SYNE2-220ENST00000555612 OR11H1Q8NG94 326 aa6.76□□□□□ -1.33
SYNE2-220ENST00000555612 OR11H2Q8NH07 326 aa6.76□□□□□ -1.33
SYNE2-220ENST00000555612 A0A087WX48 190 aa6.76□□□□□ -1.33
SYNE2-220ENST00000555612 APOHP02749 345 aaPredicted RBP6.76□□□□□ -1.33
SYNE2-220ENST00000555612 FOLR2P14207 255 aa6.76□□□□□ -1.33
SYNE2-220ENST00000555612 ST20Q9HBF5 79 aa6.76□□□□□ -1.33
SYNE2-220ENST00000555612 TBL2Q9Y4P3 447 aaKnown RBP6.76□□□□□ -1.33
SYNE2-220ENST00000555612 IGKV1-27A0A075B6S5 117 aa6.75□□□□□ -1.33
SYNE2-220ENST00000555612 IGHV3-73A0A0B4J1V6 119 aa6.75□□□□□ -1.33
SYNE2-220ENST00000555612 CNTFRP26992 372 aa6.75□□□□□ -1.33
SYNE2-220ENST00000555612 GATA4P43694 442 aa6.75□□□□□ -1.33
SYNE2-220ENST00000555612 CDX1P47902 265 aaPredicted RBP6.75□□□□□ -1.33
SYNE2-220ENST00000555612 FBLN5Q9UBX5 448 aa6.75□□□□□ -1.33
SYNE2-220ENST00000555612 ESPL1Q14674 2120 aa6.75□□□□□ -1.33
SYNE2-220ENST00000555612 TRGV1A0A0A0MS02 117 aa6.75□□□□□ -1.33
SYNE2-220ENST00000555612 F8VVB4 439 aa6.75□□□□□ -1.33
SYNE2-220ENST00000555612 F8VWA3 439 aa6.75□□□□□ -1.33
SYNE2-220ENST00000555612 GFI1BQ5VTD9 330 aa6.75□□□□□ -1.33
SYNE2-220ENST00000555612 PUSL1Q8N0Z8 303 aaKnown RBP6.75□□□□□ -1.33
SYNE2-220ENST00000555612 ATOH7Q8N100 152 aa6.75□□□□□ -1.33
SYNE2-220ENST00000555612 CARHSP1Q9Y2V2 147 aaKnown RBP6.75□□□□□ -1.33
SYNE2-220ENST00000555612 TCF20Q9UGU0 1960 aaKnown RBP6.75□□□□□ -1.33
SYNE2-220ENST00000555612 IGKV1D-8A0A087WSZ0 117 aa6.75□□□□□ -1.33
SYNE2-220ENST00000555612 TMEM155Q4W5P6 130 aa6.75□□□□□ -1.33
SYNE2-220ENST00000555612 OR1P1Q8NH06 330 aa6.75□□□□□ -1.33
SYNE2-220ENST00000555612 ZNF414Q96IQ9 312 aa6.75□□□□□ -1.33
SYNE2-220ENST00000555612 A0A0A6YYD4 124 aa6.75□□□□□ -1.33
SYNE2-220ENST00000555612 LY6G6EA0A0G2JKS1 128 aa6.75□□□□□ -1.33
SYNE2-220ENST00000555612 LOC105371267A0A1B0GV96 52 aa6.75□□□□□ -1.33
SYNE2-220ENST00000555612 HOXA5P20719 270 aa6.75□□□□□ -1.33
SYNE2-220ENST00000555612 FOXC2Q99958 501 aa6.75□□□□□ -1.33
SYNE2-220ENST00000555612 U3KQA8 63 aa6.75□□□□□ -1.33
SYNE2-220ENST00000555612 POLEQ07864 2286 aa6.75□□□□□ -1.33
SYNE2-220ENST00000555612 SLC25A48Q6ZT89 311 aaKnown RBP6.75□□□□□ -1.33
SYNE2-220ENST00000555612 C18orf12Q96KH6 178 aa6.75□□□□□ -1.33
SYNE2-220ENST00000555612 RCHY1Q96PM5 261 aa6.75□□□□□ -1.33
SYNE2-220ENST00000555612 PRADC1Q9BSG0 188 aa6.75□□□□□ -1.33
SYNE2-220ENST00000555612 C5orf63A6NC05 138 aa6.74□□□□□ -1.33
SYNE2-220ENST00000555612 SYNJ2BPP57105 145 aa6.74□□□□□ -1.33
SYNE2-220ENST00000555612 JOSD1Q15040 202 aaPredicted RBP6.74□□□□□ -1.33
SYNE2-220ENST00000555612 ZNF506Q5JVG8 444 aa6.74□□□□□ -1.33
SYNE2-220ENST00000555612 FAM131CQ96AQ9 280 aa6.74□□□□□ -1.33
SYNE2-220ENST00000555612 PSG8Q9UQ74 426 aa6.74□□□□□ -1.33
SYNE2-220ENST00000555612 FCN3O75636 299 aa6.74□□□□□ -1.33
SYNE2-220ENST00000555612 DOCK4Q8N1I0 1966 aa6.74□□□□□ -1.33
SYNE2-220ENST00000555612 IGKV1D-17A0A075B6S4 117 aa6.74□□□□□ -1.33
SYNE2-220ENST00000555612 TCF15Q12870 199 aa6.74□□□□□ -1.33
SYNE2-220ENST00000555612 IGFL3Q6UXB1 125 aa6.74□□□□□ -1.33
SYNE2-220ENST00000555612 JKAMPQ9P055 326 aa6.74□□□□□ -1.33
SYNE2-220ENST00000555612 ABCA4P78363 2273 aa6.74□□□□□ -1.33
SYNE2-220ENST00000555612 TRBV9A0A0B4J1U6 114 aa6.74□□□□□ -1.33
SYNE2-220ENST00000555612 TRAV5A0A0B4J249 113 aa6.74□□□□□ -1.33
SYNE2-220ENST00000555612 GATA3P23771 443 aa6.74□□□□□ -1.33
SYNE2-220ENST00000555612 HGFACQ04756 655 aa6.74□□□□□ -1.33
SYNE2-220ENST00000555612 LINC00518Q8N0U6 118 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms