RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 DHODHQ02127 395 aa9.34□□□□□ -0.91
XRCC3-212ENST00000555231 USF2Q15853 346 aaPredicted RBP9.34□□□□□ -0.91
XRCC3-212ENST00000555231 SOHLH1Q5JUK2 328 aa9.34□□□□□ -0.91
XRCC3-212ENST00000555231 GDF5OSQ5U4N7 250 aa9.34□□□□□ -0.91
XRCC3-212ENST00000555231 ZNF705AQ6ZN79 300 aaPredicted RBP9.34□□□□□ -0.91
XRCC3-212ENST00000555231 Q8WTZ3 238 aa9.34□□□□□ -0.91
XRCC3-212ENST00000555231 IGLC1P0CG04 106 aa9.33□□□□□ -0.92
XRCC3-212ENST00000555231 HLA-DRB4P13762 266 aa9.33□□□□□ -0.92
XRCC3-212ENST00000555231 RND2P52198 227 aa9.33□□□□□ -0.92
XRCC3-212ENST00000555231 AP2S1P53680 142 aaPredicted RBP9.33□□□□□ -0.92
XRCC3-212ENST00000555231 PIGPP57054 158 aa9.33□□□□□ -0.92
XRCC3-212ENST00000555231 RND3P61587 244 aa9.33□□□□□ -0.92
XRCC3-212ENST00000555231 LSM3P62310 102 aaKnown RBP9.33□□□□□ -0.92
XRCC3-212ENST00000555231 SNRPD3P62318 126 aaKnown RBP9.33□□□□□ -0.92
XRCC3-212ENST00000555231 BSXQ3C1V8 233 aa9.33□□□□□ -0.92
XRCC3-212ENST00000555231 SP6Q3SY56 376 aa9.33□□□□□ -0.92
XRCC3-212ENST00000555231 RNASE12Q5GAN4 147 aaKnown RBP9.33□□□□□ -0.92
XRCC3-212ENST00000555231 C1orf134Q5TEV5 83 aa9.33□□□□□ -0.92
XRCC3-212ENST00000555231 FAM222AQ5U5X8 452 aa9.33□□□□□ -0.92
XRCC3-212ENST00000555231 GSG1LQ6UXU4 331 aa9.33□□□□□ -0.92
XRCC3-212ENST00000555231 CROCCP3Q8IVE0 287 aa9.33□□□□□ -0.92
XRCC3-212ENST00000555231 OR1S2Q8NGQ3 325 aa9.33□□□□□ -0.92
XRCC3-212ENST00000555231 NEU1Q99519 415 aa9.33□□□□□ -0.92
XRCC3-212ENST00000555231 YTHDF1Q9BYJ9 559 aaKnown RBP9.33□□□□□ -0.92
XRCC3-212ENST00000555231 NRN1Q9NPD7 142 aa9.33□□□□□ -0.92
XRCC3-212ENST00000555231 HLA-DRB4X5D2U9 266 aa9.33□□□□□ -0.92
XRCC3-212ENST00000555231 APOBP04114 4563 aaKnown RBP9.32□□□□□ -0.92
XRCC3-212ENST00000555231 C3orf85A0A1B0GTC6 90 aa9.32□□□□□ -0.92
XRCC3-212ENST00000555231 ZNF705FA8MVS1 300 aaPredicted RBP9.32□□□□□ -0.92
XRCC3-212ENST00000555231 IL4P05112 153 aa9.32□□□□□ -0.92
XRCC3-212ENST00000555231 ZNF705DP0CH99 300 aaPredicted RBP9.32□□□□□ -0.92
XRCC3-212ENST00000555231 ZNF705BP0CI00 300 aaPredicted RBP9.32□□□□□ -0.92
XRCC3-212ENST00000555231 RCVRNP35243 200 aa9.32□□□□□ -0.92
XRCC3-212ENST00000555231 TRIM16LQ309B1 348 aa9.32□□□□□ -0.92
XRCC3-212ENST00000555231 PRSS54Q6PEW0 395 aa9.32□□□□□ -0.92
XRCC3-212ENST00000555231 SIGLEC15Q6ZMC9 328 aa9.32□□□□□ -0.92
XRCC3-212ENST00000555231 RNASE11Q8TAA1 199 aaKnown RBP9.32□□□□□ -0.92
XRCC3-212ENST00000555231 NIPSNAP3BQ9BS92 247 aa9.32□□□□□ -0.92
XRCC3-212ENST00000555231 COMMD3Q9UBI1 195 aa9.32□□□□□ -0.92
XRCC3-212ENST00000555231 DKK2Q9UBU2 259 aa9.32□□□□□ -0.92
XRCC3-212ENST00000555231 RFNGQ9Y644 331 aa9.32□□□□□ -0.92
XRCC3-212ENST00000555231 RPS10-NUDT3A0A1W2PQS6 291 aa9.31□□□□□ -0.92
XRCC3-212ENST00000555231 TMEM189A5PLL7 270 aa9.31□□□□□ -0.92
XRCC3-212ENST00000555231 ATG12O94817 140 aa9.31□□□□□ -0.92
XRCC3-212ENST00000555231 OR10J1P30954 320 aa9.31□□□□□ -0.92
XRCC3-212ENST00000555231 TNP2Q05952 138 aa9.31□□□□□ -0.92
XRCC3-212ENST00000555231 RNF212Q495C1 297 aa9.31□□□□□ -0.92
XRCC3-212ENST00000555231 RRNAD1Q96FB5 475 aaKnown RBP9.31□□□□□ -0.92
XRCC3-212ENST00000555231 FAM210BQ96KR6 192 aa9.31□□□□□ -0.92
XRCC3-212ENST00000555231 SCPEP1Q9HB40 452 aa9.31□□□□□ -0.92
XRCC3-212ENST00000555231 DNAH5Q8TE73 4624 aa9.3□□□□□ -0.92
XRCC3-212ENST00000555231 SMIM9A6NGZ8 99 aa9.3□□□□□ -0.92
XRCC3-212ENST00000555231 C16orf90A8MZG2 172 aa9.3□□□□□ -0.92
XRCC3-212ENST00000555231 BUB3O43684 328 aa9.3□□□□□ -0.92
XRCC3-212ENST00000555231 NXPH3O95157 252 aa9.3□□□□□ -0.92
XRCC3-212ENST00000555231 HTR2BP41595 481 aa9.3□□□□□ -0.92
XRCC3-212ENST00000555231 NKX2-1P43699 371 aaPredicted RBP9.3□□□□□ -0.92
XRCC3-212ENST00000555231 YPEL3P61236 119 aaPredicted RBP9.3□□□□□ -0.92
XRCC3-212ENST00000555231 TMEM88Q6PEY1 159 aa9.3□□□□□ -0.92
XRCC3-212ENST00000555231 LHFPL1Q86WI0 220 aa9.3□□□□□ -0.92
XRCC3-212ENST00000555231 MAPKAPK5-AS1Q8N8E1 139 aa9.3□□□□□ -0.92
XRCC3-212ENST00000555231 OR4B1Q8NGF8 309 aa9.3□□□□□ -0.92
XRCC3-212ENST00000555231 ZNF486Q96H40 463 aaPredicted RBP9.3□□□□□ -0.92
XRCC3-212ENST00000555231 LINC00052Q96N35 136 aa9.3□□□□□ -0.92
XRCC3-212ENST00000555231 SEPSECSQ9HD40 501 aaKnown RBP9.3□□□□□ -0.92
XRCC3-212ENST00000555231 HEYLQ9NQ87 328 aaPredicted RBP9.3□□□□□ -0.92
XRCC3-212ENST00000555231 SMIM31A0A1B0GVY4 71 aa9.29□□□□□ -0.92
XRCC3-212ENST00000555231 SPCS3P61009 180 aa9.29□□□□□ -0.92
XRCC3-212ENST00000555231 OR51G1Q8NGK1 321 aa9.29□□□□□ -0.92
XRCC3-212ENST00000555231 TMEM170AQ8WVE7 144 aa9.29□□□□□ -0.92
XRCC3-212ENST00000555231 NPIPB3Q92617 1050 aa9.29□□□□□ -0.92
XRCC3-212ENST00000555231 ACY3Q96HD9 319 aa9.29□□□□□ -0.92
XRCC3-212ENST00000555231 WDR12Q9GZL7 423 aaKnown RBP9.29□□□□□ -0.92
XRCC3-212ENST00000555231 SLC35B3Q9H1N7 401 aa9.29□□□□□ -0.92
XRCC3-212ENST00000555231 Q9H521 79 aa9.29□□□□□ -0.92
XRCC3-212ENST00000555231 COPZ2Q9P299 210 aa9.29□□□□□ -0.92
XRCC3-212ENST00000555231 YTHDF2Q9Y5A9 579 aaKnown RBP9.29□□□□□ -0.92
XRCC3-212ENST00000555231 LOC102723971A0A1B0GUV8 181 aa9.28□□□□□ -0.92
XRCC3-212ENST00000555231 TOMM40O96008 361 aa9.28□□□□□ -0.92
XRCC3-212ENST00000555231 APOA1P02647 267 aa9.28□□□□□ -0.92
XRCC3-212ENST00000555231 RD3LP0DJH9 198 aa9.28□□□□□ -0.92
XRCC3-212ENST00000555231 SLC25A4P12235 298 aa9.28□□□□□ -0.92
XRCC3-212ENST00000555231 ELK1P19419 428 aa9.28□□□□□ -0.92
XRCC3-212ENST00000555231 UCP1P25874 307 aa9.28□□□□□ -0.92
XRCC3-212ENST00000555231 C2orf83Q53S99 150 aa9.28□□□□□ -0.92
XRCC3-212ENST00000555231 RNASE10Q5GAN6 216 aaKnown RBP9.28□□□□□ -0.92
XRCC3-212ENST00000555231 C1orf158Q8N1D5 194 aa9.28□□□□□ -0.92
XRCC3-212ENST00000555231 ZNF709Q8N972 641 aa9.28□□□□□ -0.92
XRCC3-212ENST00000555231 SLC24A4Q8NFF2 622 aa9.28□□□□□ -0.92
XRCC3-212ENST00000555231 SAV1Q9H4B6 383 aaPredicted RBP9.28□□□□□ -0.92
XRCC3-212ENST00000555231 KLK11Q9UBX7 282 aa9.28□□□□□ -0.92
XRCC3-212ENST00000555231 TEX48A0A1B0GUV7 120 aa9.27□□□□□ -0.93
XRCC3-212ENST00000555231 CEBPZOSA8MTT3 80 aa9.27□□□□□ -0.93
XRCC3-212ENST00000555231 F6UB75 175 aa9.27□□□□□ -0.93
XRCC3-212ENST00000555231 GSTZ1O43708 216 aaPredicted RBP9.27□□□□□ -0.93
XRCC3-212ENST00000555231 HPGDSO60760 199 aa9.27□□□□□ -0.93
XRCC3-212ENST00000555231 CD3DP04234 171 aa9.27□□□□□ -0.93
XRCC3-212ENST00000555231 PSG1P11464 419 aa9.27□□□□□ -0.93
XRCC3-212ENST00000555231 OXA1LQ15070 435 aa9.27□□□□□ -0.93
XRCC3-212ENST00000555231 FOXI2Q6ZQN5 318 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms