RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 SLC25A47Q6Q0C1 308 aa5.78□□□□□ -1.48
SYNE2-216ENST00000555002 IGHV2OR16-5A0A0B4J2B6 119 aa5.78□□□□□ -1.48
SYNE2-216ENST00000555002 ZP1P60852 638 aa5.78□□□□□ -1.48
SYNE2-216ENST00000555002 SRSF1Q07955 248 aaKnown RBP eCLIP5.78□□□□□ -1.48
SYNE2-216ENST00000555002 IGKV2-40A0A087WW87 121 aaPredicted RBP5.78□□□□□ -1.48
SYNE2-216ENST00000555002 IZUMO1RA6ND01 250 aa5.78□□□□□ -1.48
SYNE2-216ENST00000555002 IGKV2D-40P01614 121 aaPredicted RBP5.78□□□□□ -1.48
SYNE2-216ENST00000555002 ESDP10768 282 aa5.78□□□□□ -1.48
SYNE2-216ENST00000555002 ZFAND6Q6FIF0 208 aa5.78□□□□□ -1.48
SYNE2-216ENST00000555002 HAPLN4Q86UW8 402 aa5.78□□□□□ -1.48
SYNE2-216ENST00000555002 TRAV25A0A0B4J276 109 aa5.78□□□□□ -1.48
SYNE2-216ENST00000555002 BRCA1P38398 1863 aaKnown RBP5.78□□□□□ -1.48
SYNE2-216ENST00000555002 NHSQ6T4R5 1651 aa5.78□□□□□ -1.48
SYNE2-216ENST00000555002 CD5LO43866 347 aa5.78□□□□□ -1.48
SYNE2-216ENST00000555002 C8orf82Q6P1X6 216 aaPredicted RBP5.78□□□□□ -1.48
SYNE2-216ENST00000555002 SAXO1Q8IYX7 474 aa5.78□□□□□ -1.48
SYNE2-216ENST00000555002 HMGCLL1Q8TB92 370 aa5.78□□□□□ -1.48
SYNE2-216ENST00000555002 KIAA1551Q9HCM1 1747 aa5.78□□□□□ -1.48
SYNE2-216ENST00000555002 PUSL1Q8N0Z8 303 aaKnown RBP5.78□□□□□ -1.48
SYNE2-216ENST00000555002 AQP3Q92482 292 aa5.78□□□□□ -1.48
SYNE2-216ENST00000555002 C5orf66Q9H5L9 145 aa5.78□□□□□ -1.48
SYNE2-216ENST00000555002 A0A1B0GW15 77 aa5.78□□□□□ -1.48
SYNE2-216ENST00000555002 FSTP19883 344 aa5.78□□□□□ -1.48
SYNE2-216ENST00000555002 SPRED2Q7Z698 418 aa5.78□□□□□ -1.48
SYNE2-216ENST00000555002 TMEM174Q8WUU8 243 aa5.78□□□□□ -1.48
SYNE2-216ENST00000555002 TFF1P04155 84 aa5.77□□□□□ -1.48
SYNE2-216ENST00000555002 ERG28Q9UKR5 140 aa5.77□□□□□ -1.48
SYNE2-216ENST00000555002 SLC25A45Q8N413 288 aa5.77□□□□□ -1.49
SYNE2-216ENST00000555002 A8MWV9 139 aa5.77□□□□□ -1.49
SYNE2-216ENST00000555002 PEX11BO96011 259 aa5.77□□□□□ -1.49
SYNE2-216ENST00000555002 LCNL1Q6ZST4 164 aa5.77□□□□□ -1.49
SYNE2-216ENST00000555002 Q96M66 194 aa5.77□□□□□ -1.49
SYNE2-216ENST00000555002 IL36BQ9NZH7 164 aa5.77□□□□□ -1.49
SYNE2-216ENST00000555002 STRCP1A6NGW2 1772 aa5.77□□□□□ -1.49
SYNE2-216ENST00000555002 SAA2-SAA4A0A096LPE2 208 aa5.77□□□□□ -1.49
SYNE2-216ENST00000555002 SAA2P0DJI9 122 aaPredicted RBP5.77□□□□□ -1.49
SYNE2-216ENST00000555002 FAM110DQ8TAY7 271 aaPredicted RBP5.77□□□□□ -1.49
SYNE2-216ENST00000555002 LAGE3Q14657 143 aa5.77□□□□□ -1.49
SYNE2-216ENST00000555002 ATP5L2Q7Z4Y8 100 aa5.77□□□□□ -1.49
SYNE2-216ENST00000555002 RASL10AQ92737 203 aa5.77□□□□□ -1.49
SYNE2-216ENST00000555002 RNASE6Q93091 150 aaKnown RBP5.77□□□□□ -1.49
SYNE2-216ENST00000555002 ABHD17AQ96GS6 310 aa5.77□□□□□ -1.49
SYNE2-216ENST00000555002 TRAV13-1A0A0B4J241 112 aa5.77□□□□□ -1.49
SYNE2-216ENST00000555002 PAX8Q06710 450 aa5.77□□□□□ -1.49
SYNE2-216ENST00000555002 DLX4Q92988 240 aaPredicted RBP5.77□□□□□ -1.49
SYNE2-216ENST00000555002 LSM4Q9Y4Z0 139 aaKnown RBP5.77□□□□□ -1.49
SYNE2-216ENST00000555002 TMEM187Q14656 261 aa5.77□□□□□ -1.49
SYNE2-216ENST00000555002 RNASE7Q9H1E1 156 aaKnown RBP5.77□□□□□ -1.49
SYNE2-216ENST00000555002 SMDT1Q9H4I9 107 aa5.77□□□□□ -1.49
SYNE2-216ENST00000555002 EPDR1Q9UM22 224 aa5.77□□□□□ -1.49
SYNE2-216ENST00000555002 ARHGAP32A7KAX9 2087 aa5.77□□□□□ -1.49
SYNE2-216ENST00000555002 ARID2Q68CP9 1835 aa5.77□□□□□ -1.49
SYNE2-216ENST00000555002 CCL3L1P16619 93 aa5.77□□□□□ -1.49
SYNE2-216ENST00000555002 ASPHD2Q6ICH7 369 aa5.77□□□□□ -1.49
SYNE2-216ENST00000555002 OCIAD2Q56VL3 154 aa5.76□□□□□ -1.49
SYNE2-216ENST00000555002 Q6ZT83 130 aa5.76□□□□□ -1.49
SYNE2-216ENST00000555002 RNF125Q96EQ8 232 aa5.76□□□□□ -1.49
SYNE2-216ENST00000555002 AMELYQ99218 206 aa5.76□□□□□ -1.49
SYNE2-216ENST00000555002 KLRD1Q13241 179 aa5.76□□□□□ -1.49
SYNE2-216ENST00000555002 NAA38Q9BRA0 125 aaKnown RBP5.76□□□□□ -1.49
SYNE2-216ENST00000555002 ZNF98A6NK75 572 aa5.76□□□□□ -1.49
SYNE2-216ENST00000555002 PRB2P02812 416 aaPredicted RBP5.76□□□□□ -1.49
SYNE2-216ENST00000555002 RNF114Q9Y508 228 aa5.76□□□□□ -1.49
SYNE2-216ENST00000555002 LOC102723996A0A087X1L8 192 aa5.76□□□□□ -1.49
SYNE2-216ENST00000555002 SS18Q15532 418 aa5.76□□□□□ -1.49
SYNE2-216ENST00000555002 C6orf226Q5I0X4 101 aa5.76□□□□□ -1.49
SYNE2-216ENST00000555002 TIMM23BQ5SRD1 257 aa5.76□□□□□ -1.49
SYNE2-216ENST00000555002 NYNRINQ9P2P1 1898 aaKnown RBP5.76□□□□□ -1.49
SYNE2-216ENST00000555002 TRAV41A0A0B4J266 112 aa5.76□□□□□ -1.49
SYNE2-216ENST00000555002 A0A1W2PPV9 198 aa5.76□□□□□ -1.49
SYNE2-216ENST00000555002 TM4SF5O14894 197 aa5.76□□□□□ -1.49
SYNE2-216ENST00000555002 IGKCP01834 107 aa5.76□□□□□ -1.49
SYNE2-216ENST00000555002 HOXB1P14653 301 aaPredicted RBP5.76□□□□□ -1.49
SYNE2-216ENST00000555002 C2orf82Q6UX34 121 aa5.76□□□□□ -1.49
SYNE2-216ENST00000555002 MDS2Q8NDY4 140 aa5.76□□□□□ -1.49
SYNE2-216ENST00000555002 SAP25Q8TEE9 199 aa5.76□□□□□ -1.49
SYNE2-216ENST00000555002 C5orf30Q96GV9 206 aa5.76□□□□□ -1.49
SYNE2-216ENST00000555002 RALGAPA2Q2PPJ7 1873 aa5.76□□□□□ -1.49
SYNE2-216ENST00000555002 TMEM238C9JI98 176 aa5.76□□□□□ -1.49
SYNE2-216ENST00000555002 NOVP48745 357 aa5.76□□□□□ -1.49
SYNE2-216ENST00000555002 FAM166AQ6J272 317 aa5.76□□□□□ -1.49
SYNE2-216ENST00000555002 ZCCHC24Q8N2G6 241 aaKnown RBP5.76□□□□□ -1.49
SYNE2-216ENST00000555002 EPOPA6NHQ4 379 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 HMGA2P52926 109 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 ORMDL2Q53FV1 153 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 VMO1Q7Z5L0 202 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 GATAD1Q8WUU5 269 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 MGST2Q99735 147 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 C15orf32Q32M92 178 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 TEX43Q6ZNM6 134 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 TRAV8-3A0A0A6YYJ7 113 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 SRRM4A7MD48 611 aaKnown RBP5.75□□□□□ -1.49
SYNE2-216ENST00000555002 C12orf77C9JDV5 145 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 ATP5G3P48201 142 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 KIAA0040Q15053 153 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 ZXDCQ2QGD7 858 aaPredicted RBP5.75□□□□□ -1.49
SYNE2-216ENST00000555002 PIP4P2Q8N4L2 257 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 GGACTQ9BVM4 153 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 TRAV5A0A0B4J249 113 aa5.75□□□□□ -1.49
SYNE2-216ENST00000555002 A0A1W2PQF6 199 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms