RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 LGALS4P56470 323 aa7.05□□□□□ -1.28
TDP1-210ENST00000554976 Q8N9W7 124 aa7.05□□□□□ -1.28
TDP1-210ENST00000554976 GATAD1Q8WUU5 269 aa7.05□□□□□ -1.28
TDP1-210ENST00000554976 ZNF414Q96IQ9 312 aa7.05□□□□□ -1.28
TDP1-210ENST00000554976 YPEL4Q96NS1 127 aa7.05□□□□□ -1.28
TDP1-210ENST00000554976 ACTR3CQ9C0K3 210 aaPredicted RBP7.05□□□□□ -1.28
TDP1-210ENST00000554976 EIF5A2Q9GZV4 153 aaKnown RBP7.05□□□□□ -1.28
TDP1-210ENST00000554976 ZNF469Q96JG9 3925 aaPredicted RBP7.05□□□□□ -1.28
TDP1-210ENST00000554976 SMCO3A2RU48 225 aa7.04□□□□□ -1.28
TDP1-210ENST00000554976 PPP1R2P9O14990 202 aa7.04□□□□□ -1.28
TDP1-210ENST00000554976 PLA2G2AP14555 144 aa7.04□□□□□ -1.28
TDP1-210ENST00000554976 HNF1AP20823 631 aa7.04□□□□□ -1.28
TDP1-210ENST00000554976 CDC34P49427 236 aaPredicted RBP7.04□□□□□ -1.28
TDP1-210ENST00000554976 NDUFA6P56556 154 aa7.04□□□□□ -1.28
TDP1-210ENST00000554976 AWAT1Q58HT5 328 aa7.04□□□□□ -1.28
TDP1-210ENST00000554976 SPATA31B1PQ5VZV4 182 aa7.04□□□□□ -1.28
TDP1-210ENST00000554976 TMEM116Q8NCL8 245 aa7.04□□□□□ -1.28
TDP1-210ENST00000554976 ISOC2Q96AB3 205 aa7.04□□□□□ -1.28
TDP1-210ENST00000554976 ZNF503Q96F45 646 aa7.04□□□□□ -1.28
TDP1-210ENST00000554976 PERPQ96FX8 193 aa7.04□□□□□ -1.28
TDP1-210ENST00000554976 SEPSECSQ9HD40 501 aaKnown RBP7.04□□□□□ -1.28
TDP1-210ENST00000554976 TENM4Q6N022 2769 aa7.04□□□□□ -1.28
TDP1-210ENST00000554976 OR5G3P0C626 314 aa7.04□□□□□ -1.28
TDP1-210ENST00000554976 RHEBQ15382 184 aa7.04□□□□□ -1.28
TDP1-210ENST00000554976 MMDQ15546 238 aa7.04□□□□□ -1.28
TDP1-210ENST00000554976 FAM24BQ8N5W8 94 aa7.04□□□□□ -1.28
TDP1-210ENST00000554976 ZNF709Q8N972 641 aa7.04□□□□□ -1.28
TDP1-210ENST00000554976 SSMEM1Q8WWF3 244 aa7.04□□□□□ -1.28
TDP1-210ENST00000554976 MEGF9Q9H1U4 602 aa7.04□□□□□ -1.28
TDP1-210ENST00000554976 KCNIP2Q9NS61 270 aa7.04□□□□□ -1.28
TDP1-210ENST00000554976 CELSR2Q9HCU4 2923 aa7.04□□□□□ -1.28
TDP1-210ENST00000554976 IGHV1-69DA0A0B4J2H0 117 aa7.03□□□□□ -1.28
TDP1-210ENST00000554976 IGHV1-69P01742 117 aa7.03□□□□□ -1.28
TDP1-210ENST00000554976 RPLP1P05386 114 aaKnown RBP7.03□□□□□ -1.28
TDP1-210ENST00000554976 JOSD1Q15040 202 aaPredicted RBP7.03□□□□□ -1.28
TDP1-210ENST00000554976 C19orf54Q5BKX5 351 aa7.03□□□□□ -1.28
TDP1-210ENST00000554976 ZNF664Q8N3J9 261 aa7.03□□□□□ -1.28
TDP1-210ENST00000554976 ABHD5Q8WTS1 349 aa7.03□□□□□ -1.28
TDP1-210ENST00000554976 LPAR2Q9HBW0 351 aa7.03□□□□□ -1.28
TDP1-210ENST00000554976 GNG13Q9P2W3 67 aa7.03□□□□□ -1.28
TDP1-210ENST00000554976 NAV3Q8IVL0 2385 aa7.03□□□□□ -1.28
TDP1-210ENST00000554976 TCRBV4S1A1TA0A5B7 111 aa7.03□□□□□ -1.28
TDP1-210ENST00000554976 A1L4Q6 167 aa7.03□□□□□ -1.28
TDP1-210ENST00000554976 NPIPB5A8MRT5 1133 aa7.03□□□□□ -1.28
TDP1-210ENST00000554976 CYB5BO43169 146 aa7.03□□□□□ -1.28
TDP1-210ENST00000554976 SLC25A16P16260 332 aa7.03□□□□□ -1.28
TDP1-210ENST00000554976 KLF17Q5JT82 389 aaPredicted RBP7.03□□□□□ -1.28
TDP1-210ENST00000554976 DMRTA1Q5VZB9 504 aa7.03□□□□□ -1.28
TDP1-210ENST00000554976 CRYBG3Q68DQ2 2970 aa7.03□□□□□ -1.28
TDP1-210ENST00000554976 ZNF562Q6V9R5 426 aa7.03□□□□□ -1.28
TDP1-210ENST00000554976 CYP2G1PQ6ZSU1 146 aa7.03□□□□□ -1.28
TDP1-210ENST00000554976 LRRC75A-AS1Q8N1F1 130 aa7.03□□□□□ -1.28
TDP1-210ENST00000554976 TTC9CQ8N5M4 171 aa7.03□□□□□ -1.28
TDP1-210ENST00000554976 CYB561D1Q8N8Q1 229 aa7.03□□□□□ -1.28
TDP1-210ENST00000554976 TMEM37Q8WXS4 190 aa7.03□□□□□ -1.28
TDP1-210ENST00000554976 VAX2Q9UIW0 290 aa7.03□□□□□ -1.28
TDP1-210ENST00000554976 AKAP9Q99996 3911 aa7.03□□□□□ -1.28
TDP1-210ENST00000554976 IGHV7-81A0A0B4J1V7 117 aa7.03□□□□□ -1.28
TDP1-210ENST00000554976 K7EIM0 57 aa7.03□□□□□ -1.28
TDP1-210ENST00000554976 HLA-DRB1P01911 266 aa7.03□□□□□ -1.28
TDP1-210ENST00000554976 MSMBP08118 114 aa7.03□□□□□ -1.28
TDP1-210ENST00000554976 OR10J1P30954 320 aa7.03□□□□□ -1.28
TDP1-210ENST00000554976 AKR1C3P42330 323 aa7.03□□□□□ -1.28
TDP1-210ENST00000554976 SUB1P53999 127 aaKnown RBP eCLIP7.03□□□□□ -1.28
TDP1-210ENST00000554976 PATE2Q6UY27 113 aa7.03□□□□□ -1.28
TDP1-210ENST00000554976 MANBALQ9NQG1 85 aa7.03□□□□□ -1.28
TDP1-210ENST00000554976 ZNF462Q96JM2 2506 aa7.02□□□□□ -1.29
TDP1-210ENST00000554976 F8W735 103 aaPredicted RBP7.02□□□□□ -1.29
TDP1-210ENST00000554976 HMGB3O15347 200 aaKnown RBP7.02□□□□□ -1.29
TDP1-210ENST00000554976 AVPP01185 164 aa7.02□□□□□ -1.29
TDP1-210ENST00000554976 FAM167A-AS1Q96KT0 104 aa7.02□□□□□ -1.29
TDP1-210ENST00000554976 TRGV9Q99603 122 aa7.02□□□□□ -1.29
TDP1-210ENST00000554976 SLC25A33Q9BSK2 321 aa7.02□□□□□ -1.29
TDP1-210ENST00000554976 BEX4Q9NWD9 120 aaPredicted RBP7.02□□□□□ -1.29
TDP1-210ENST00000554976 IGLV11-55A0A075B6I3 123 aa7.02□□□□□ -1.29
TDP1-210ENST00000554976 CORTO00230 105 aa7.02□□□□□ -1.29
TDP1-210ENST00000554976 PHOX2AO14813 284 aa7.02□□□□□ -1.29
TDP1-210ENST00000554976 FSHBP01225 129 aa7.02□□□□□ -1.29
TDP1-210ENST00000554976 AMY1AP04745 511 aa7.02□□□□□ -1.29
TDP1-210ENST00000554976 NPPCP23582 126 aa7.02□□□□□ -1.29
TDP1-210ENST00000554976 GATA2P23769 480 aaPredicted RBP7.02□□□□□ -1.29
TDP1-210ENST00000554976 COL8A1P27658 744 aa7.02□□□□□ -1.29
TDP1-210ENST00000554976 PSMB3P49720 205 aa7.02□□□□□ -1.29
TDP1-210ENST00000554976 GNB1P62873 340 aa7.02□□□□□ -1.29
TDP1-210ENST00000554976 ZNF90Q03938 601 aa7.02□□□□□ -1.29
TDP1-210ENST00000554976 CLEC12BQ2HXU8 276 aa7.02□□□□□ -1.29
TDP1-210ENST00000554976 ETFRF1Q6IPR1 90 aa7.02□□□□□ -1.29
TDP1-210ENST00000554976 FAM210BQ96KR6 192 aa7.02□□□□□ -1.29
TDP1-210ENST00000554976 PACRGQ96M98 296 aaPredicted RBP7.02□□□□□ -1.29
TDP1-210ENST00000554976 FANCD2OSQ96PS1 177 aa7.02□□□□□ -1.29
TDP1-210ENST00000554976 HSPB9Q9BQS6 159 aa7.02□□□□□ -1.29
TDP1-210ENST00000554976 SLC25A2Q9BXI2 301 aa7.02□□□□□ -1.29
TDP1-210ENST00000554976 FUT9Q9Y231 359 aa7.02□□□□□ -1.29
TDP1-210ENST00000554976 SPTBN1Q01082 2364 aaKnown RBP7.02□□□□□ -1.29
TDP1-210ENST00000554976 ZFP92A6NM28 416 aa7.01□□□□□ -1.29
TDP1-210ENST00000554976 ARL14EPLP0DKL9 152 aa7.01□□□□□ -1.29
TDP1-210ENST00000554976 IGHV4-38-2P0DP08 117 aa7.01□□□□□ -1.29
TDP1-210ENST00000554976 CRIP2P52943 208 aaPredicted RBP7.01□□□□□ -1.29
TDP1-210ENST00000554976 PLP1P60201 277 aa7.01□□□□□ -1.29
TDP1-210ENST00000554976 CX3CL1P78423 397 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms