RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 TRAT1Q6PIZ9 186 aa12.76□□□□□ -0.37
SYNE3-203ENST00000554873 BOD1L2Q8IYS8 172 aa12.76□□□□□ -0.37
SYNE3-203ENST00000554873 OR4X2Q8NGF9 303 aa12.76□□□□□ -0.37
SYNE3-203ENST00000554873 ADTRPQ96IZ2 230 aa12.76□□□□□ -0.37
SYNE3-203ENST00000554873 CDX2Q99626 313 aaPredicted RBP12.76□□□□□ -0.37
SYNE3-203ENST00000554873 HEYLQ9NQ87 328 aaPredicted RBP12.76□□□□□ -0.37
SYNE3-203ENST00000554873 ACTL6BO94805 426 aa12.76□□□□□ -0.37
SYNE3-203ENST00000554873 LINC00205P59089 165 aa12.76□□□□□ -0.37
SYNE3-203ENST00000554873 HOXA4Q00056 320 aaPredicted RBP12.76□□□□□ -0.37
SYNE3-203ENST00000554873 DHRS13Q6UX07 377 aa12.76□□□□□ -0.37
SYNE3-203ENST00000554873 Q6ZR03 302 aa12.76□□□□□ -0.37
SYNE3-203ENST00000554873 NEU4Q8WWR8 484 aaPredicted RBP12.76□□□□□ -0.37
SYNE3-203ENST00000554873 NANOS1Q8WY41 292 aaKnown RBP12.76□□□□□ -0.37
SYNE3-203ENST00000554873 VGLL1Q99990 258 aa12.75□□□□□ -0.37
SYNE3-203ENST00000554873 MRPL16Q9NX20 251 aaKnown RBP12.75□□□□□ -0.37
SYNE3-203ENST00000554873 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.75□□□□□ -0.37
SYNE3-203ENST00000554873 PRR20EP86478 221 aa12.75□□□□□ -0.37
SYNE3-203ENST00000554873 PRR20CP86479 221 aa12.75□□□□□ -0.37
SYNE3-203ENST00000554873 PRR20DP86480 221 aa12.75□□□□□ -0.37
SYNE3-203ENST00000554873 PRR20BP86481 221 aa12.75□□□□□ -0.37
SYNE3-203ENST00000554873 PRR20AP86496 221 aa12.75□□□□□ -0.37
SYNE3-203ENST00000554873 RTL8BQ17RB0 113 aa12.75□□□□□ -0.37
SYNE3-203ENST00000554873 TMEM30CPA0ZSE6 113 aa12.75□□□□□ -0.37
SYNE3-203ENST00000554873 VWC2LB2RUY7 222 aa12.75□□□□□ -0.37
SYNE3-203ENST00000554873 VDAC2P45880 294 aaPredicted RBP12.75□□□□□ -0.37
SYNE3-203ENST00000554873 TBC1D28Q2M2D7 210 aa12.75□□□□□ -0.37
SYNE3-203ENST00000554873 ZNF766Q5HY98 468 aa12.75□□□□□ -0.37
SYNE3-203ENST00000554873 PEAR1Q5VY43 1037 aaPredicted RBP12.75□□□□□ -0.37
SYNE3-203ENST00000554873 ZNF503Q96F45 646 aa12.75□□□□□ -0.37
SYNE3-203ENST00000554873 COL25A1Q9BXS0 654 aaPredicted RBP12.75□□□□□ -0.37
SYNE3-203ENST00000554873 SPRY4Q9C004 299 aa12.75□□□□□ -0.37
SYNE3-203ENST00000554873 KNTC1P50748 2209 aa12.74□□□□□ -0.37
SYNE3-203ENST00000554873 IGHV3-7P01780 117 aa12.74□□□□□ -0.37
SYNE3-203ENST00000554873 F8W1H4 67 aa12.74□□□□□ -0.37
SYNE3-203ENST00000554873 WNT9BO14905 357 aa12.74□□□□□ -0.37
SYNE3-203ENST00000554873 SMAD7O15105 426 aaKnown RBP12.74□□□□□ -0.37
SYNE3-203ENST00000554873 TFF1P04155 84 aa12.74□□□□□ -0.37
SYNE3-203ENST00000554873 SMIM13P0DJ93 91 aa12.74□□□□□ -0.37
SYNE3-203ENST00000554873 ZNF479Q96JC4 524 aa12.74□□□□□ -0.37
SYNE3-203ENST00000554873 TRIOBPQ9H2D6 2365 aa12.73□□□□□ -0.37
SYNE3-203ENST00000554873 OR11H12B2RN74 326 aa12.73□□□□□ -0.37
SYNE3-203ENST00000554873 GFRA3O60609 400 aa12.73□□□□□ -0.37
SYNE3-203ENST00000554873 PRR31Q5SQ13 230 aa12.73□□□□□ -0.37
SYNE3-203ENST00000554873 ZNF826PQ6ZT77 177 aa12.73□□□□□ -0.37
SYNE3-203ENST00000554873 CXorf67Q86X51 503 aaPredicted RBP12.73□□□□□ -0.37
SYNE3-203ENST00000554873 OR11H1Q8NG94 326 aa12.73□□□□□ -0.37
SYNE3-203ENST00000554873 OR11H2Q8NH07 326 aa12.73□□□□□ -0.37
SYNE3-203ENST00000554873 PGPEP1Q9NXJ5 209 aa12.73□□□□□ -0.37
SYNE3-203ENST00000554873 FBLL1A6NHQ2 334 aaKnown RBP12.73□□□□□ -0.37
SYNE3-203ENST00000554873 LINC00473A8K010 186 aa12.73□□□□□ -0.37
SYNE3-203ENST00000554873 FCGR2BP31994 310 aaPredicted RBP12.73□□□□□ -0.37
SYNE3-203ENST00000554873 ABHD17AQ96GS6 310 aa12.73□□□□□ -0.37
SYNE3-203ENST00000554873 SPAG8Q99932 426 aaPredicted RBP12.73□□□□□ -0.37
SYNE3-203ENST00000554873 OOEPA6NGQ2 149 aa12.72□□□□□ -0.37
SYNE3-203ENST00000554873 ABHD12Q8N2K0 398 aa12.72□□□□□ -0.37
SYNE3-203ENST00000554873 HSD17B10Q99714 261 aaKnown RBP12.72□□□□□ -0.37
SYNE3-203ENST00000554873 NDFIP1Q9BT67 221 aa12.72□□□□□ -0.37
SYNE3-203ENST00000554873 WDFY4Q6ZS81 3184 aa12.72□□□□□ -0.37
SYNE3-203ENST00000554873 ACP1P24666 158 aa12.72□□□□□ -0.37
SYNE3-203ENST00000554873 CD24P25063 80 aa12.72□□□□□ -0.37
SYNE3-203ENST00000554873 MEOX1P50221 254 aa12.72□□□□□ -0.37
SYNE3-203ENST00000554873 COQ2Q96H96 371 aa12.72□□□□□ -0.37
SYNE3-203ENST00000554873 ZNF747Q9BV97 191 aa12.72□□□□□ -0.37
SYNE3-203ENST00000554873 SIGLEC8Q9NYZ4 499 aa12.72□□□□□ -0.37
SYNE3-203ENST00000554873 COL27A1Q8IZC6 1860 aaPredicted RBP12.72□□□□□ -0.37
SYNE3-203ENST00000554873 KLRC4-KLRK1H3BQV0 150 aa12.71□□□□□ -0.37
SYNE3-203ENST00000554873 TAS2R45P59539 299 aa12.71□□□□□ -0.37
SYNE3-203ENST00000554873 C11orf53Q8IXP5 236 aa12.71□□□□□ -0.37
SYNE3-203ENST00000554873 GCSAMQ8N6F7 178 aa12.71□□□□□ -0.37
SYNE3-203ENST00000554873 NABP2Q9BQ15 211 aa12.71□□□□□ -0.37
SYNE3-203ENST00000554873 DEFB127Q9H1M4 99 aa12.71□□□□□ -0.37
SYNE3-203ENST00000554873 SOX21Q9Y651 276 aaPredicted RBP12.71□□□□□ -0.37
SYNE3-203ENST00000554873 IGHV3-43A0A0B4J1X8 118 aa12.71□□□□□ -0.37
SYNE3-203ENST00000554873 FAM90A9PA6NNJ1 464 aa12.71□□□□□ -0.37
SYNE3-203ENST00000554873 IGHV3-43DP0DP04 118 aa12.71□□□□□ -0.37
SYNE3-203ENST00000554873 LINC00479Q96M42 142 aa12.71□□□□□ -0.37
SYNE3-203ENST00000554873 TMUB1Q9BVT8 246 aa12.71□□□□□ -0.37
SYNE3-203ENST00000554873 PRR14LQ5THK1 2151 aa12.71□□□□□ -0.38
SYNE3-203ENST00000554873 TEX50A0A1B0GTY4 177 aa12.7□□□□□ -0.38
SYNE3-203ENST00000554873 DEFB108AA8MXU0 73 aa12.7□□□□□ -0.38
SYNE3-203ENST00000554873 SP1P08047 785 aa12.7□□□□□ -0.38
SYNE3-203ENST00000554873 WFDC2Q14508 124 aa12.7□□□□□ -0.38
SYNE3-203ENST00000554873 RFESDQ8TAC1 157 aa12.7□□□□□ -0.38
SYNE3-203ENST00000554873 ZNF418Q8TF45 676 aaPredicted RBP12.7□□□□□ -0.38
SYNE3-203ENST00000554873 IQCF6A8MYZ5 107 aa12.7□□□□□ -0.38
SYNE3-203ENST00000554873 NCR2O95944 276 aa12.7□□□□□ -0.38
SYNE3-203ENST00000554873 MPV17P39210 176 aa12.7□□□□□ -0.38
SYNE3-203ENST00000554873 ZNF138P52744 262 aa12.7□□□□□ -0.38
SYNE3-203ENST00000554873 PRAMEF5Q5TYX0 476 aa12.7□□□□□ -0.38
SYNE3-203ENST00000554873 PRAMEF6Q5VXH4 476 aa12.7□□□□□ -0.38
SYNE3-203ENST00000554873 ACP7Q6ZNF0 438 aa12.7□□□□□ -0.38
SYNE3-203ENST00000554873 OBP2BQ9NPH6 170 aa12.7□□□□□ -0.38
SYNE3-203ENST00000554873 TIMM8BQ9Y5J9 83 aaPredicted RBP12.7□□□□□ -0.38
SYNE3-203ENST00000554873 INSIG2Q9Y5U4 225 aa12.7□□□□□ -0.38
SYNE3-203ENST00000554873 C19orf67A6NJJ6 358 aa12.7□□□□□ -0.38
SYNE3-203ENST00000554873 PLPPR2Q96GM1 343 aa12.7□□□□□ -0.38
SYNE3-203ENST00000554873 GTSF1Q8WW33 167 aa12.69□□□□□ -0.38
SYNE3-203ENST00000554873 METRNQ9UJH8 293 aa12.69□□□□□ -0.38
SYNE3-203ENST00000554873 JPT1Q9UK76 154 aa12.69□□□□□ -0.38
SYNE3-203ENST00000554873 KBTBD11-OT1A0A1B0GTJ5 212 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms