RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 C2orf83Q53S99 150 aa4.54□□□□□ -1.68
ATXN3-230ENST00000554673 CLLU1Q5K131 121 aa4.54□□□□□ -1.68
ATXN3-230ENST00000554673 GPR157Q5UAW9 335 aa4.54□□□□□ -1.68
ATXN3-230ENST00000554673 CTRB2Q6GPI1 263 aa4.54□□□□□ -1.68
ATXN3-230ENST00000554673 THOC7Q6I9Y2 204 aaKnown RBP4.54□□□□□ -1.68
ATXN3-230ENST00000554673 OR8G2PQ6IF36 304 aa4.54□□□□□ -1.68
ATXN3-230ENST00000554673 PATE2Q6UY27 113 aa4.54□□□□□ -1.68
ATXN3-230ENST00000554673 C9orf139Q6ZV77 190 aa4.54□□□□□ -1.68
ATXN3-230ENST00000554673 PPP1R27Q86WC6 154 aa4.54□□□□□ -1.68
ATXN3-230ENST00000554673 BAP18Q8IXM2 172 aa4.54□□□□□ -1.68
ATXN3-230ENST00000554673 ZNF114Q8NC26 417 aa4.54□□□□□ -1.68
ATXN3-230ENST00000554673 CD300LFQ8TDQ1 290 aa4.54□□□□□ -1.68
ATXN3-230ENST00000554673 SCARB1Q8WTV0 552 aa4.54□□□□□ -1.68
ATXN3-230ENST00000554673 GATAD1Q8WUU5 269 aa4.54□□□□□ -1.68
ATXN3-230ENST00000554673 MALSU1Q96EH3 234 aa4.54□□□□□ -1.68
ATXN3-230ENST00000554673 ATP5SQ99766 215 aa4.54□□□□□ -1.68
ATXN3-230ENST00000554673 GGTLC1Q9BX51 225 aa4.54□□□□□ -1.68
ATXN3-230ENST00000554673 WDR61Q9GZS3 305 aaKnown RBP4.54□□□□□ -1.68
ATXN3-230ENST00000554673 RPRMQ9NS64 109 aa4.54□□□□□ -1.68
ATXN3-230ENST00000554673 CACFD1Q9UGQ2 172 aa4.54□□□□□ -1.68
ATXN3-230ENST00000554673 LINC00527Q9UJ94 153 aa4.54□□□□□ -1.68
ATXN3-230ENST00000554673 IGLV11-55A0A075B6I3 123 aa4.53□□□□□ -1.68
ATXN3-230ENST00000554673 UBE2L5PA0A1B0GUS4 154 aa4.53□□□□□ -1.68
ATXN3-230ENST00000554673 CEBPZOSA8MTT3 80 aa4.53□□□□□ -1.68
ATXN3-230ENST00000554673 OOSP1A8MZH6 123 aa4.53□□□□□ -1.68
ATXN3-230ENST00000554673 H3BUX3 64 aa4.53□□□□□ -1.68
ATXN3-230ENST00000554673 TRIM77I1YAP6 450 aa4.53□□□□□ -1.68
ATXN3-230ENST00000554673 NDUFB8O95169 186 aa4.53□□□□□ -1.68
ATXN3-230ENST00000554673 HRASP01112 189 aa4.53□□□□□ -1.68
ATXN3-230ENST00000554673 IGKV1-17P01599 117 aa4.53□□□□□ -1.68
ATXN3-230ENST00000554673 TRBV12-3P01733 135 aa4.53□□□□□ -1.68
ATXN3-230ENST00000554673 HLA-DRB1P01911 266 aa4.53□□□□□ -1.68
ATXN3-230ENST00000554673 OR13C7P0DN81 318 aa4.53□□□□□ -1.68
ATXN3-230ENST00000554673 NPY1RP25929 384 aa4.53□□□□□ -1.68
ATXN3-230ENST00000554673 IER3P46695 156 aa4.53□□□□□ -1.68
ATXN3-230ENST00000554673 LGALS7P47929 136 aa4.53□□□□□ -1.68
ATXN3-230ENST00000554673 CRIP2P52943 208 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-230ENST00000554673 UBA52P62987 128 aaKnown RBP4.53□□□□□ -1.68
ATXN3-230ENST00000554673 MMDQ15546 238 aa4.53□□□□□ -1.68
ATXN3-230ENST00000554673 TNXAQ16473 311 aa4.53□□□□□ -1.68
ATXN3-230ENST00000554673 ANXA2RQ3ZCQ2 193 aa4.53□□□□□ -1.68
ATXN3-230ENST00000554673 MIC13Q5XKP0 118 aa4.53□□□□□ -1.68
ATXN3-230ENST00000554673 RPP25LQ8N5L8 163 aaKnown RBP4.53□□□□□ -1.68
ATXN3-230ENST00000554673 SLC24A4Q8NFF2 622 aa4.53□□□□□ -1.68
ATXN3-230ENST00000554673 OR1L8Q8NGR8 309 aa4.53□□□□□ -1.68
ATXN3-230ENST00000554673 OR5B3Q8NH48 314 aa4.53□□□□□ -1.68
ATXN3-230ENST00000554673 NOL4LQ96MY1 436 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-230ENST00000554673 RBM14Q96PK6 669 aaKnown RBP4.53□□□□□ -1.68
ATXN3-230ENST00000554673 DUX5Q96PT3 197 aa4.53□□□□□ -1.68
ATXN3-230ENST00000554673 SSX3Q99909 188 aa4.53□□□□□ -1.68
ATXN3-230ENST00000554673 HINT2Q9BX68 163 aa4.53□□□□□ -1.68
ATXN3-230ENST00000554673 KLK15Q9H2R5 256 aa4.53□□□□□ -1.68
ATXN3-230ENST00000554673 ZNF702PQ9H963 129 aa4.53□□□□□ -1.68
ATXN3-230ENST00000554673 RAB9BQ9NP90 201 aa4.53□□□□□ -1.68
ATXN3-230ENST00000554673 SERTAD4Q9NUC0 356 aa4.53□□□□□ -1.68
ATXN3-230ENST00000554673 PRNDQ9UKY0 176 aa4.53□□□□□ -1.68
ATXN3-230ENST00000554673 AMMECR1Q9Y4X0 333 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-230ENST00000554673 SETXQ7Z333 2677 aaKnown RBP4.53□□□□□ -1.68
ATXN3-230ENST00000554673 F8P00451 2351 aa4.53□□□□□ -1.68
ATXN3-230ENST00000554673 LY6G6DO95868 133 aa4.52□□□□□ -1.69
ATXN3-230ENST00000554673 IFNA17P01571 189 aa4.52□□□□□ -1.69
ATXN3-230ENST00000554673 FGF2P09038 288 aa4.52□□□□□ -1.69
ATXN3-230ENST00000554673 NPSP0C0P6 89 aa4.52□□□□□ -1.69
ATXN3-230ENST00000554673 IL3RAP26951 378 aa4.52□□□□□ -1.69
ATXN3-230ENST00000554673 RPL27AP46776 148 aaKnown RBP4.52□□□□□ -1.69
ATXN3-230ENST00000554673 HOXA1P49639 335 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-230ENST00000554673 ARHGDIBP52566 201 aa4.52□□□□□ -1.69
ATXN3-230ENST00000554673 ERVK-16P61578 105 aa4.52□□□□□ -1.69
ATXN3-230ENST00000554673 GNB1P62873 340 aa4.52□□□□□ -1.69
ATXN3-230ENST00000554673 DLK1P80370 383 aa4.52□□□□□ -1.69
ATXN3-230ENST00000554673 ZNF90Q03938 601 aa4.52□□□□□ -1.69
ATXN3-230ENST00000554673 FXYD3Q14802 87 aa4.52□□□□□ -1.69
ATXN3-230ENST00000554673 TCTEX1D4Q5JR98 221 aa4.52□□□□□ -1.69
ATXN3-230ENST00000554673 Q6YL49 198 aa4.52□□□□□ -1.69
ATXN3-230ENST00000554673 Q6ZSN1 163 aa4.52□□□□□ -1.69
ATXN3-230ENST00000554673 C18orf65Q6ZTR6 163 aa4.52□□□□□ -1.69
ATXN3-230ENST00000554673 ZNF767PQ75MW2 155 aa4.52□□□□□ -1.69
ATXN3-230ENST00000554673 OR2T10Q8NGZ9 312 aa4.52□□□□□ -1.69
ATXN3-230ENST00000554673 OR4A16Q8NH70 328 aa4.52□□□□□ -1.69
ATXN3-230ENST00000554673 OR4A5Q8NH83 315 aa4.52□□□□□ -1.69
ATXN3-230ENST00000554673 RNASE11Q8TAA1 199 aaKnown RBP4.52□□□□□ -1.69
ATXN3-230ENST00000554673 SSMEM1Q8WWF3 244 aa4.52□□□□□ -1.69
ATXN3-230ENST00000554673 FAM167A-AS1Q96KT0 104 aa4.52□□□□□ -1.69
ATXN3-230ENST00000554673 LINC00052Q96N35 136 aa4.52□□□□□ -1.69
ATXN3-230ENST00000554673 SLC25A33Q9BSK2 321 aa4.52□□□□□ -1.69
ATXN3-230ENST00000554673 TMEM147Q9BVK8 224 aa4.52□□□□□ -1.69
ATXN3-230ENST00000554673 NPCDR1Q9BY65 106 aa4.52□□□□□ -1.69
ATXN3-230ENST00000554673 PARD6GQ9BYG4 376 aaPredicted RBP4.52□□□□□ -1.69
ATXN3-230ENST00000554673 F11RQ9Y624 299 aaKnown RBP4.52□□□□□ -1.69
ATXN3-230ENST00000554673 TRBV9A0A0B4J1U6 114 aa4.51□□□□□ -1.69
ATXN3-230ENST00000554673 KANTRA0A1W2PQU2 76 aa4.51□□□□□ -1.69
ATXN3-230ENST00000554673 KRTAP23-1A1A580 65 aa4.51□□□□□ -1.69
ATXN3-230ENST00000554673 CXorf65A6NEN9 183 aa4.51□□□□□ -1.69
ATXN3-230ENST00000554673 HMGB3O15347 200 aaKnown RBP4.51□□□□□ -1.69
ATXN3-230ENST00000554673 CD5LO43866 347 aa4.51□□□□□ -1.69
ATXN3-230ENST00000554673 IGHV3-23P01764 117 aa4.51□□□□□ -1.69
ATXN3-230ENST00000554673 SEC11BP0C7V7 166 aa4.51□□□□□ -1.69
ATXN3-230ENST00000554673 PRB4P10163 310 aaPredicted RBP4.51□□□□□ -1.69
ATXN3-230ENST00000554673 VPREB1P12018 145 aa4.51□□□□□ -1.69
ATXN3-230ENST00000554673 NPPCP23582 126 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms