RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 HINT2Q9BX68 163 aa3.38□□□□□ -1.87
ATXN3-229ENST00000554672 PLEKHA2Q9HB19 425 aa3.38□□□□□ -1.87
ATXN3-229ENST00000554672 PTTG2Q9NZH5 202 aa3.38□□□□□ -1.87
ATXN3-229ENST00000554672 XCL2Q9UBD3 114 aa3.38□□□□□ -1.87
ATXN3-229ENST00000554672 PUS1Q9Y606 427 aaKnown RBP eCLIP3.38□□□□□ -1.87
ATXN3-229ENST00000554672 RFNGQ9Y644 331 aa3.38□□□□□ -1.87
ATXN3-229ENST00000554672 UBR4Q5T4S7 5183 aa3.38□□□□□ -1.87
ATXN3-229ENST00000554672 TRAV1-2A0A0B4J238 106 aa3.37□□□□□ -1.87
ATXN3-229ENST00000554672 TMEM272A0A1B0GTI8 110 aa3.37□□□□□ -1.87
ATXN3-229ENST00000554672 METTL21EPA6NDL7 271 aa3.37□□□□□ -1.87
ATXN3-229ENST00000554672 ZNF705FA8MVS1 300 aaPredicted RBP3.37□□□□□ -1.87
ATXN3-229ENST00000554672 I3L2K1 104 aa3.37□□□□□ -1.87
ATXN3-229ENST00000554672 SULT1C2O00338 296 aa3.37□□□□□ -1.87
ATXN3-229ENST00000554672 PRYO14603 147 aa3.37□□□□□ -1.87
ATXN3-229ENST00000554672 TNFSF12O43508 249 aa3.37□□□□□ -1.87
ATXN3-229ENST00000554672 GNG7O60262 68 aa3.37□□□□□ -1.87
ATXN3-229ENST00000554672 ARL6IP5O75915 188 aa3.37□□□□□ -1.87
ATXN3-229ENST00000554672 SNAPC5O75971 98 aa3.37□□□□□ -1.87
ATXN3-229ENST00000554672 ZNF688P0C7X2 276 aa3.37□□□□□ -1.87
ATXN3-229ENST00000554672 ZNF705DP0CH99 300 aaPredicted RBP3.37□□□□□ -1.87
ATXN3-229ENST00000554672 ZNF705BP0CI00 300 aaPredicted RBP3.37□□□□□ -1.87
ATXN3-229ENST00000554672 GNRHRP30968 328 aa3.37□□□□□ -1.87
ATXN3-229ENST00000554672 NPBWR1P48145 328 aa3.37□□□□□ -1.87
ATXN3-229ENST00000554672 HSPA13P48723 471 aa3.37□□□□□ -1.87
ATXN3-229ENST00000554672 HOXA1P49639 335 aaPredicted RBP3.37□□□□□ -1.87
ATXN3-229ENST00000554672 EIF2B2P49770 351 aaKnown RBP3.37□□□□□ -1.87
ATXN3-229ENST00000554672 AP2S1P53680 142 aaPredicted RBP3.37□□□□□ -1.87
ATXN3-229ENST00000554672 CCL18P55774 89 aa3.37□□□□□ -1.87
ATXN3-229ENST00000554672 XGP55808 180 aa3.37□□□□□ -1.87
ATXN3-229ENST00000554672 ARPC4P59998 168 aa3.37□□□□□ -1.87
ATXN3-229ENST00000554672 MLLT11Q13015 90 aaPredicted RBP3.37□□□□□ -1.87
ATXN3-229ENST00000554672 CATR1Q13166 79 aa3.37□□□□□ -1.87
ATXN3-229ENST00000554672 KCTD21Q4G0X4 260 aa3.37□□□□□ -1.87
ATXN3-229ENST00000554672 FAM222AQ5U5X8 452 aa3.37□□□□□ -1.87
ATXN3-229ENST00000554672 ZNF600Q6ZNG1 722 aa3.37□□□□□ -1.87
ATXN3-229ENST00000554672 AHSA2Q719I0 299 aa3.37□□□□□ -1.87
ATXN3-229ENST00000554672 BPIFB6Q8NFQ5 453 aa3.37□□□□□ -1.87
ATXN3-229ENST00000554672 DCANP1Q8TF63 244 aa3.37□□□□□ -1.87
ATXN3-229ENST00000554672 MOB3AQ96BX8 217 aa3.37□□□□□ -1.87
ATXN3-229ENST00000554672 ZNF479Q96JC4 524 aa3.37□□□□□ -1.87
ATXN3-229ENST00000554672 TMEM56Q96MV1 263 aa3.37□□□□□ -1.87
ATXN3-229ENST00000554672 GFI1Q99684 422 aa3.37□□□□□ -1.87
ATXN3-229ENST00000554672 VCXQ9H320 206 aa3.37□□□□□ -1.87
ATXN3-229ENST00000554672 Q9H8V8 135 aa3.37□□□□□ -1.87
ATXN3-229ENST00000554672 SEPSECSQ9HD40 501 aaKnown RBP3.37□□□□□ -1.87
ATXN3-229ENST00000554672 CCL28Q9NRJ3 127 aa3.37□□□□□ -1.87
ATXN3-229ENST00000554672 FKBP11Q9NYL4 201 aa3.37□□□□□ -1.87
ATXN3-229ENST00000554672 TPRKBQ9Y3C4 175 aa3.37□□□□□ -1.87
ATXN3-229ENST00000554672 OR51B2Q9Y5P1 312 aa3.37□□□□□ -1.87
ATXN3-229ENST00000554672 FAT1Q14517 4588 aa3.37□□□□□ -1.87
ATXN3-229ENST00000554672 AGRNO00468 2067 aa3.36□□□□□ -1.87
ATXN3-229ENST00000554672 HELTA6NFD8 242 aa3.36□□□□□ -1.87
ATXN3-229ENST00000554672 H3BMM0 161 aa3.36□□□□□ -1.87
ATXN3-229ENST00000554672 TMEM50AO95807 157 aa3.36□□□□□ -1.87
ATXN3-229ENST00000554672 MT-CO2P00403 227 aa3.36□□□□□ -1.87
ATXN3-229ENST00000554672 CRYBB3P26998 211 aa3.36□□□□□ -1.87
ATXN3-229ENST00000554672 P2RY1P47900 373 aa3.36□□□□□ -1.87
ATXN3-229ENST00000554672 AQP4P55087 323 aa3.36□□□□□ -1.87
ATXN3-229ENST00000554672 ERVK-16P61578 105 aa3.36□□□□□ -1.87
ATXN3-229ENST00000554672 DAD1P61803 113 aa3.36□□□□□ -1.87
ATXN3-229ENST00000554672 SNRPD3P62318 126 aaKnown RBP3.36□□□□□ -1.87
ATXN3-229ENST00000554672 DHRS2Q13268 280 aa3.36□□□□□ -1.87
ATXN3-229ENST00000554672 TBCEQ15813 527 aaPredicted RBP3.36□□□□□ -1.87
ATXN3-229ENST00000554672 CDNFQ49AH0 187 aa3.36□□□□□ -1.87
ATXN3-229ENST00000554672 PSMG4Q5JS54 123 aa3.36□□□□□ -1.87
ATXN3-229ENST00000554672 SERTAD4-AS1Q5TG53 156 aa3.36□□□□□ -1.87
ATXN3-229ENST00000554672 HACD4Q5VWC8 232 aa3.36□□□□□ -1.87
ATXN3-229ENST00000554672 TPRA1Q86W33 373 aa3.36□□□□□ -1.87
ATXN3-229ENST00000554672 SECTM1Q8WVN6 248 aa3.36□□□□□ -1.87
ATXN3-229ENST00000554672 TMEM203Q969S6 136 aa3.36□□□□□ -1.87
ATXN3-229ENST00000554672 NARS2Q96I59 477 aaKnown RBP3.36□□□□□ -1.87
ATXN3-229ENST00000554672 METTL26Q96S19 204 aa3.36□□□□□ -1.87
ATXN3-229ENST00000554672 VCX3BQ9H321 246 aa3.36□□□□□ -1.87
ATXN3-229ENST00000554672 ACOT13Q9NPJ3 140 aa3.36□□□□□ -1.87
ATXN3-229ENST00000554672 SCN3BQ9NY72 215 aa3.36□□□□□ -1.87
ATXN3-229ENST00000554672 COMMD9Q9P000 198 aa3.36□□□□□ -1.87
ATXN3-229ENST00000554672 MDFICQ9P1T7 246 aa3.36□□□□□ -1.87
ATXN3-229ENST00000554672 ANXA10Q9UJ72 324 aa3.36□□□□□ -1.87
ATXN3-229ENST00000554672 PRNDQ9UKY0 176 aa3.36□□□□□ -1.87
ATXN3-229ENST00000554672 RAB26Q9ULW5 256 aa3.36□□□□□ -1.87
ATXN3-229ENST00000554672 LINC00588Q9Y4M8 146 aa3.36□□□□□ -1.87
ATXN3-229ENST00000554672 V9GY05 133 aa3.36□□□□□ -1.87
ATXN3-229ENST00000554672 IGHV3OR16-12A0A075B7B8 117 aa3.35□□□□□ -1.87
ATXN3-229ENST00000554672 A0A1B0GU03 582 aa3.35□□□□□ -1.87
ATXN3-229ENST00000554672 TRDV1A0A1B0GX56 115 aa3.35□□□□□ -1.87
ATXN3-229ENST00000554672 A0A1W2PPQ1 181 aa3.35□□□□□ -1.87
ATXN3-229ENST00000554672 RPS10-NUDT3A0A1W2PQS6 291 aa3.35□□□□□ -1.87
ATXN3-229ENST00000554672 PTGES3LE9PB15 166 aa3.35□□□□□ -1.87
ATXN3-229ENST00000554672 KRASP01116 189 aa3.35□□□□□ -1.87
ATXN3-229ENST00000554672 IGHV3-48P01763 117 aa3.35□□□□□ -1.87
ATXN3-229ENST00000554672 HBE1P02100 147 aa3.35□□□□□ -1.87
ATXN3-229ENST00000554672 FCGR2CP31995 323 aa3.35□□□□□ -1.87
ATXN3-229ENST00000554672 ALDH3B2P48448 385 aa3.35□□□□□ -1.87
ATXN3-229ENST00000554672 GABARAPL2P60520 117 aa3.35□□□□□ -1.87
ATXN3-229ENST00000554672 ERHP84090 104 aaKnown RBP3.35□□□□□ -1.87
ATXN3-229ENST00000554672 USF2Q15853 346 aaPredicted RBP3.35□□□□□ -1.87
ATXN3-229ENST00000554672 TTC32Q5I0X7 151 aa3.35□□□□□ -1.87
ATXN3-229ENST00000554672 HES5Q5TA89 166 aa3.35□□□□□ -1.87
ATXN3-229ENST00000554672 UFD1Q92890 307 aa3.35□□□□□ -1.87
ATXN3-229ENST00000554672 TRIM63Q969Q1 353 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms