RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 OR4C12Q96R67 309 aa8.06□□□□□ -1.12
SHMT2-215ENST00000554656 EDA2RQ9HAV5 297 aa8.06□□□□□ -1.12
SHMT2-215ENST00000554656 HEYLQ9NQ87 328 aaPredicted RBP8.06□□□□□ -1.12
SHMT2-215ENST00000554656 LCE6AA0A183 80 aa8.05□□□□□ -1.12
SHMT2-215ENST00000554656 TEX50A0A1B0GTY4 177 aa8.05□□□□□ -1.12
SHMT2-215ENST00000554656 ANKRD34BA5PLL1 514 aa8.05□□□□□ -1.12
SHMT2-215ENST00000554656 SEC11BP0C7V7 166 aa8.05□□□□□ -1.12
SHMT2-215ENST00000554656 HTR2BP41595 481 aa8.05□□□□□ -1.12
SHMT2-215ENST00000554656 HOXA1P49639 335 aaPredicted RBP8.05□□□□□ -1.12
SHMT2-215ENST00000554656 RAB11AP62491 216 aa8.05□□□□□ -1.12
SHMT2-215ENST00000554656 KLF5Q13887 457 aaPredicted RBP8.05□□□□□ -1.12
SHMT2-215ENST00000554656 SPANXN5Q5MJ07 72 aa8.05□□□□□ -1.12
SHMT2-215ENST00000554656 RPL7L1Q6DKI1 246 aaKnown RBP8.05□□□□□ -1.12
SHMT2-215ENST00000554656 ZFAND6Q6FIF0 208 aa8.05□□□□□ -1.12
SHMT2-215ENST00000554656 HSD17B13Q7Z5P4 300 aaPredicted RBP8.05□□□□□ -1.12
SHMT2-215ENST00000554656 OR5C1Q8NGR4 320 aa8.05□□□□□ -1.12
SHMT2-215ENST00000554656 ATP5SQ99766 215 aa8.05□□□□□ -1.12
SHMT2-215ENST00000554656 SRSF8Q9BRL6 282 aaKnown RBP8.05□□□□□ -1.12
SHMT2-215ENST00000554656 GINS3Q9BRX5 216 aa8.05□□□□□ -1.12
SHMT2-215ENST00000554656 GGACTQ9BVM4 153 aa8.05□□□□□ -1.12
SHMT2-215ENST00000554656 SLC25A32Q9H2D1 315 aa8.05□□□□□ -1.12
SHMT2-215ENST00000554656 PLEKHA3Q9HB20 300 aa8.05□□□□□ -1.12
SHMT2-215ENST00000554656 NDUFA4L2Q9NRX3 87 aa8.05□□□□□ -1.12
SHMT2-215ENST00000554656 C15orf62A8K5M9 175 aa8.04□□□□□ -1.12
SHMT2-215ENST00000554656 PMS2P5A8MQ11 134 aa8.04□□□□□ -1.12
SHMT2-215ENST00000554656 A8MZ25 164 aa8.04□□□□□ -1.12
SHMT2-215ENST00000554656 FNDC10F2Z333 226 aa8.04□□□□□ -1.12
SHMT2-215ENST00000554656 H3BP45 60 aa8.04□□□□□ -1.12
SHMT2-215ENST00000554656 H3BUA1 57 aa8.04□□□□□ -1.12
SHMT2-215ENST00000554656 CST7O76096 145 aa8.04□□□□□ -1.12
SHMT2-215ENST00000554656 IFNA5P01569 189 aa8.04□□□□□ -1.12
SHMT2-215ENST00000554656 METTL15P1P0C7V9 234 aa8.04□□□□□ -1.12
SHMT2-215ENST00000554656 PRSS8Q16651 343 aa8.04□□□□□ -1.12
SHMT2-215ENST00000554656 BSXQ3C1V8 233 aa8.04□□□□□ -1.12
SHMT2-215ENST00000554656 ALKAL2Q6UX46 152 aa8.04□□□□□ -1.12
SHMT2-215ENST00000554656 OR10P1Q8NGE3 313 aa8.04□□□□□ -1.12
SHMT2-215ENST00000554656 GNPNAT1Q96EK6 184 aaPredicted RBP8.04□□□□□ -1.12
SHMT2-215ENST00000554656 BSCL2Q96G97 398 aaPredicted RBP8.04□□□□□ -1.12
SHMT2-215ENST00000554656 ELOVL1Q9BW60 279 aa8.04□□□□□ -1.12
SHMT2-215ENST00000554656 SMIM3Q9BZL3 60 aa8.04□□□□□ -1.12
SHMT2-215ENST00000554656 ZMAT4Q9H898 229 aa8.04□□□□□ -1.12
SHMT2-215ENST00000554656 ZNF430Q9H8G1 570 aaPredicted RBP8.04□□□□□ -1.12
SHMT2-215ENST00000554656 WFDC1Q9HC57 220 aa8.04□□□□□ -1.12
SHMT2-215ENST00000554656 ZNF355PQ9NSJ1 428 aa8.04□□□□□ -1.12
SHMT2-215ENST00000554656 RPS10-NUDT3A0A1W2PQS6 291 aa8.03□□□□□ -1.12
SHMT2-215ENST00000554656 IZUMO1RA6ND01 250 aa8.03□□□□□ -1.12
SHMT2-215ENST00000554656 ACTL6BO94805 426 aa8.03□□□□□ -1.12
SHMT2-215ENST00000554656 IFNA10P01566 189 aa8.03□□□□□ -1.12
SHMT2-215ENST00000554656 APELAP0DMC3 54 aa8.03□□□□□ -1.12
SHMT2-215ENST00000554656 ZP3P21754 424 aa8.03□□□□□ -1.12
SHMT2-215ENST00000554656 NPY1RP25929 384 aa8.03□□□□□ -1.12
SHMT2-215ENST00000554656 RPL27AP46776 148 aaKnown RBP8.03□□□□□ -1.12
SHMT2-215ENST00000554656 RAB5CP51148 216 aa8.03□□□□□ -1.12
SHMT2-215ENST00000554656 SYNJ2BPP57105 145 aa8.03□□□□□ -1.12
SHMT2-215ENST00000554656 DLK1P80370 383 aa8.03□□□□□ -1.12
SHMT2-215ENST00000554656 ERHP84090 104 aaKnown RBP8.03□□□□□ -1.12
SHMT2-215ENST00000554656 SLC38A11Q08AI6 406 aa8.03□□□□□ -1.12
SHMT2-215ENST00000554656 VWC2Q2TAL6 325 aa8.03□□□□□ -1.12
SHMT2-215ENST00000554656 C2orf83Q53S99 150 aa8.03□□□□□ -1.12
SHMT2-215ENST00000554656 ZNF343Q6P1L6 599 aa8.03□□□□□ -1.12
SHMT2-215ENST00000554656 LILRB2Q8N423 598 aa8.03□□□□□ -1.12
SHMT2-215ENST00000554656 SLC24A4Q8NFF2 622 aa8.03□□□□□ -1.12
SHMT2-215ENST00000554656 OR9G4Q8NGQ1 327 aa8.03□□□□□ -1.12
SHMT2-215ENST00000554656 RNF141Q8WVD5 230 aa8.03□□□□□ -1.12
SHMT2-215ENST00000554656 TMEM147Q9BVK8 224 aa8.03□□□□□ -1.12
SHMT2-215ENST00000554656 MED9Q9NWA0 146 aa8.03□□□□□ -1.12
SHMT2-215ENST00000554656 DNAH1Q9P2D7 4330 aa8.03□□□□□ -1.12
SHMT2-215ENST00000554656 LINC00862A6NCI5 91 aa8.02□□□□□ -1.13
SHMT2-215ENST00000554656 CNIH1O95406 144 aa8.02□□□□□ -1.13
SHMT2-215ENST00000554656 BRI3O95415 125 aa8.02□□□□□ -1.13
SHMT2-215ENST00000554656 CSN3P07498 182 aa8.02□□□□□ -1.13
SHMT2-215ENST00000554656 SPP1P10451 314 aa8.02□□□□□ -1.13
SHMT2-215ENST00000554656 SULT1A2P50226 295 aa8.02□□□□□ -1.13
SHMT2-215ENST00000554656 SUB1P53999 127 aaKnown RBP eCLIP8.02□□□□□ -1.13
SHMT2-215ENST00000554656 ARL16Q0P5N6 197 aa8.02□□□□□ -1.13
SHMT2-215ENST00000554656 CLINT1Q14677 625 aa8.02□□□□□ -1.13
SHMT2-215ENST00000554656 HAGHQ16775 308 aa8.02□□□□□ -1.13
SHMT2-215ENST00000554656 ADAMTSL5Q6ZMM2 481 aa8.02□□□□□ -1.13
SHMT2-215ENST00000554656 TMEM217Q8N7C4 229 aa8.02□□□□□ -1.13
SHMT2-215ENST00000554656 ZNF114Q8NC26 417 aa8.02□□□□□ -1.13
SHMT2-215ENST00000554656 SAT2Q96F10 170 aaPredicted RBP8.02□□□□□ -1.13
SHMT2-215ENST00000554656 PSMG3Q9BT73 122 aaPredicted RBP8.02□□□□□ -1.13
SHMT2-215ENST00000554656 UQCC1Q9NVA1 299 aa8.02□□□□□ -1.13
SHMT2-215ENST00000554656 TIMM9Q9Y5J7 89 aa8.02□□□□□ -1.13
SHMT2-215ENST00000554656 A0A0G2JLM5 398 aa8.01□□□□□ -1.13
SHMT2-215ENST00000554656 UMAD1C9J7I0 102 aa8.01□□□□□ -1.13
SHMT2-215ENST00000554656 PRSS46E5RG02 174 aa8.01□□□□□ -1.13
SHMT2-215ENST00000554656 MPDU1O75352 247 aa8.01□□□□□ -1.13
SHMT2-215ENST00000554656 NMBP08949 121 aa8.01□□□□□ -1.13
SHMT2-215ENST00000554656 RNASE2P10153 161 aaKnown RBP8.01□□□□□ -1.13
SHMT2-215ENST00000554656 SNCAP37840 140 aa8.01□□□□□ -1.13
SHMT2-215ENST00000554656 SERF2P84101 59 aa8.01□□□□□ -1.13
SHMT2-215ENST00000554656 TNXAQ16473 311 aa8.01□□□□□ -1.13
SHMT2-215ENST00000554656 SPINK9Q5DT21 86 aa8.01□□□□□ -1.13
SHMT2-215ENST00000554656 PVRIGQ6DKI7 326 aa8.01□□□□□ -1.13
SHMT2-215ENST00000554656 OR8G2PQ6IF36 304 aa8.01□□□□□ -1.13
SHMT2-215ENST00000554656 SCGB1C1Q8TD33 95 aa8.01□□□□□ -1.13
SHMT2-215ENST00000554656 TMED6Q8WW62 240 aa8.01□□□□□ -1.13
SHMT2-215ENST00000554656 HINT2Q9BX68 163 aa8.01□□□□□ -1.13
SHMT2-215ENST00000554656 RETNQ9HD89 108 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms