RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 CXorf1O96002 111 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 DDA1Q9BW61 102 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 DLL3Q9NYJ7 618 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 RFNGQ9Y644 331 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 PAPPA2Q9BXP8 1791 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 MSGN1A6NI15 193 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 HOXA5P20719 270 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 SNRPD3P62318 126 aaKnown RBP2.78□□□□□ -1.96
SYNE2-212ENST00000554584 SMIM2Q9BVW6 85 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 SEC11BP0C7V7 166 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 CNRIP1Q96F85 164 aaPredicted RBP2.78□□□□□ -1.96
SYNE2-212ENST00000554584 NYNRINQ9P2P1 1898 aaKnown RBP2.78□□□□□ -1.96
SYNE2-212ENST00000554584 GGTLC3B5MD39 225 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 SLC25A45Q8N413 288 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 VSTM2AQ8TAG5 236 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 SNHG12Q9BXW3 62 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 QSER1Q2KHR3 1735 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 EDIL3O43854 480 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 RNF138Q8WVD3 245 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 PTP4A1Q93096 173 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 PRELID3AQ96N28 172 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 C8orf49Q96NF6 230 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 USP54Q70EL1 1684 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 VWC2LB2RUY7 222 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 SCTP09683 121 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 ID3Q02535 119 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 C14orf144Q96I85 54 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 SDHCQ99643 169 aaPredicted RBP2.78□□□□□ -1.96
SYNE2-212ENST00000554584 OR51M1Q9H341 326 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 ZNF703Q9H7S9 590 aaPredicted RBP2.78□□□□□ -1.96
SYNE2-212ENST00000554584 FOLR2P14207 255 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 NUTF2P61970 127 aaKnown RBP2.78□□□□□ -1.96
SYNE2-212ENST00000554584 GTSF1Q8WW33 167 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 VAX2Q9UIW0 290 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 NDUFS7O75251 213 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 TCF24Q7RTU0 167 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 ZNF430Q9H8G1 570 aaPredicted RBP2.78□□□□□ -1.96
SYNE2-212ENST00000554584 UQCR10Q9UDW1 63 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 HMSDA8MTL9 139 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 EWSR1Q01844 656 aaKnown RBP eCLIP2.78□□□□□ -1.96
SYNE2-212ENST00000554584 MEF2BQ02080 365 aaPredicted RBP2.78□□□□□ -1.96
SYNE2-212ENST00000554584 PIP4P2Q8N4L2 257 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 GGACTQ9BVM4 153 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 PKIBQ9C010 78 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 IGKV2-40A0A087WW87 121 aaPredicted RBP2.78□□□□□ -1.96
SYNE2-212ENST00000554584 IGKV2D-40P01614 121 aaPredicted RBP2.78□□□□□ -1.96
SYNE2-212ENST00000554584 ADMP35318 185 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 BMPERQ8N8U9 685 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 POC1AQ8NBT0 407 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 MRGPRX3Q96LB0 322 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 H3BRM9 83 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 UCP1P25874 307 aa2.78□□□□□ -1.96
SYNE2-212ENST00000554584 VN1R4Q7Z5H5 301 aa2.78□□□□□ -1.97
SYNE2-212ENST00000554584 RCHY1Q96PM5 261 aa2.78□□□□□ -1.97
SYNE2-212ENST00000554584 PRDM13Q9H4Q3 707 aa2.78□□□□□ -1.97
SYNE2-212ENST00000554584 SRRM4A7MD48 611 aaKnown RBP2.78□□□□□ -1.97
SYNE2-212ENST00000554584 CD5P06127 495 aa2.78□□□□□ -1.97
SYNE2-212ENST00000554584 CD177Q8N6Q3 437 aa2.78□□□□□ -1.97
SYNE2-212ENST00000554584 C9orf106Q8NAJ2 232 aa2.78□□□□□ -1.97
SYNE2-212ENST00000554584 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.77□□□□□ -1.97
SYNE2-212ENST00000554584 IGKV6-21A0A0C4DH24 114 aa2.77□□□□□ -1.97
SYNE2-212ENST00000554584 CTAG2O75638 210 aa2.77□□□□□ -1.97
SYNE2-212ENST00000554584 NDUFB4O95168 129 aa2.77□□□□□ -1.97
SYNE2-212ENST00000554584 FAHD1Q6P587 224 aa2.77□□□□□ -1.97
SYNE2-212ENST00000554584 CYB561D1Q8N8Q1 229 aa2.77□□□□□ -1.97
SYNE2-212ENST00000554584 SIGMAR1Q99720 223 aa2.77□□□□□ -1.97
SYNE2-212ENST00000554584 RARRES2Q99969 163 aa2.77□□□□□ -1.97
SYNE2-212ENST00000554584 GZMHP20718 246 aa2.77□□□□□ -1.97
SYNE2-212ENST00000554584 DTX2Q86UW9 622 aa2.77□□□□□ -1.97
SYNE2-212ENST00000554584 SPACA3Q8IXA5 215 aa2.77□□□□□ -1.97
SYNE2-212ENST00000554584 MLST8Q9BVC4 326 aa2.77□□□□□ -1.97
SYNE2-212ENST00000554584 MRPS16Q9Y3D3 137 aaKnown RBP2.77□□□□□ -1.97
SYNE2-212ENST00000554584 IGHV1-45A0A0A0MS14 117 aa2.77□□□□□ -1.97
SYNE2-212ENST00000554584 LILRA5A6NI73 299 aa2.77□□□□□ -1.97
SYNE2-212ENST00000554584 STAG3L3P0CL85 134 aa2.77□□□□□ -1.97
SYNE2-212ENST00000554584 DEFB1P60022 68 aa2.77□□□□□ -1.97
SYNE2-212ENST00000554584 PRSS54Q6PEW0 395 aa2.77□□□□□ -1.97
SYNE2-212ENST00000554584 STPG2Q8N412 459 aa2.77□□□□□ -1.97
SYNE2-212ENST00000554584 Q8TAT8 98 aa2.77□□□□□ -1.97
SYNE2-212ENST00000554584 MTFP1Q9UDX5 166 aa2.77□□□□□ -1.97
SYNE2-212ENST00000554584 SIGLEC7Q9Y286 467 aa2.77□□□□□ -1.97
SYNE2-212ENST00000554584 CDK5R1Q15078 307 aa2.77□□□□□ -1.97
SYNE2-212ENST00000554584 UNQ6494/PRO21346Q6UXR6 183 aa2.77□□□□□ -1.97
SYNE2-212ENST00000554584 TMEM167BQ9NRX6 74 aa2.77□□□□□ -1.97
SYNE2-212ENST00000554584 PKD1L3Q7Z443 1732 aa2.77□□□□□ -1.97
SYNE2-212ENST00000554584 HLA-DRB1P01911 266 aa2.77□□□□□ -1.97
SYNE2-212ENST00000554584 UNC119Q13432 240 aa2.77□□□□□ -1.97
SYNE2-212ENST00000554584 PMVKQ15126 192 aa2.77□□□□□ -1.97
SYNE2-212ENST00000554584 C10orf128Q5T292 105 aa2.77□□□□□ -1.97
SYNE2-212ENST00000554584 RPRMLQ8N4K4 120 aa2.77□□□□□ -1.97
SYNE2-212ENST00000554584 ZNF837Q96EG3 531 aaPredicted RBP2.77□□□□□ -1.97
SYNE2-212ENST00000554584 PPDPFQ9H3Y8 114 aa2.77□□□□□ -1.97
SYNE2-212ENST00000554584 IGLV3-9A0A075B6K5 115 aa2.77□□□□□ -1.97
SYNE2-212ENST00000554584 TRAV8-3A0A0A6YYJ7 113 aa2.77□□□□□ -1.97
SYNE2-212ENST00000554584 HIST1H1DP16402 221 aaKnown RBP2.77□□□□□ -1.97
SYNE2-212ENST00000554584 ZNF138P52744 262 aa2.77□□□□□ -1.97
SYNE2-212ENST00000554584 MEF2CQ06413 473 aaPredicted RBP2.77□□□□□ -1.97
SYNE2-212ENST00000554584 WDR82Q6UXN9 313 aa2.77□□□□□ -1.97
SYNE2-212ENST00000554584 SPSB1Q96BD6 273 aa2.77□□□□□ -1.97
SYNE2-212ENST00000554584 Q96MF0 132 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms