RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 RPS10-NUDT3A0A1W2PQS6 291 aa4.88□□□□□ -1.63
SCFD1-212ENST00000554486 C15orf62A8K5M9 175 aa4.88□□□□□ -1.63
SCFD1-212ENST00000554486 H3BP45 60 aa4.88□□□□□ -1.63
SCFD1-212ENST00000554486 CLEC3BP05452 202 aa4.88□□□□□ -1.63
SCFD1-212ENST00000554486 CRYGCP07315 174 aa4.88□□□□□ -1.63
SCFD1-212ENST00000554486 TAS2R30P59541 319 aa4.88□□□□□ -1.63
SCFD1-212ENST00000554486 ERHP84090 104 aaKnown RBP4.88□□□□□ -1.63
SCFD1-212ENST00000554486 BSXQ3C1V8 233 aa4.88□□□□□ -1.63
SCFD1-212ENST00000554486 AKIRIN2Q53H80 203 aa4.88□□□□□ -1.63
SCFD1-212ENST00000554486 C10orf99Q6UWK7 81 aa4.88□□□□□ -1.63
SCFD1-212ENST00000554486 AKAP14Q86UN6 197 aa4.88□□□□□ -1.63
SCFD1-212ENST00000554486 TCTE3Q8IZS6 198 aa4.88□□□□□ -1.63
SCFD1-212ENST00000554486 TTC9CQ8N5M4 171 aa4.88□□□□□ -1.63
SCFD1-212ENST00000554486 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.88□□□□□ -1.63
SCFD1-212ENST00000554486 PRR26Q8N8Z3 221 aa4.88□□□□□ -1.63
SCFD1-212ENST00000554486 ZNF114Q8NC26 417 aa4.88□□□□□ -1.63
SCFD1-212ENST00000554486 OR2T35Q8NGX2 323 aa4.88□□□□□ -1.63
SCFD1-212ENST00000554486 OR2T6Q8NHC8 308 aa4.88□□□□□ -1.63
SCFD1-212ENST00000554486 LINC01006Q8NI28 216 aa4.88□□□□□ -1.63
SCFD1-212ENST00000554486 SMIM8Q96KF7 97 aa4.88□□□□□ -1.63
SCFD1-212ENST00000554486 TMEM68Q96MH6 324 aa4.88□□□□□ -1.63
SCFD1-212ENST00000554486 OR4C12Q96R67 309 aa4.88□□□□□ -1.63
SCFD1-212ENST00000554486 RAB40CQ96S21 281 aa4.88□□□□□ -1.63
SCFD1-212ENST00000554486 P2RX4Q99571 388 aa4.88□□□□□ -1.63
SCFD1-212ENST00000554486 ENY2Q9NPA8 101 aa4.88□□□□□ -1.63
SCFD1-212ENST00000554486 MBD2Q9UBB5 411 aa4.88□□□□□ -1.63
SCFD1-212ENST00000554486 LSM4Q9Y4Z0 139 aaKnown RBP4.88□□□□□ -1.63
SCFD1-212ENST00000554486 F11RQ9Y624 299 aaKnown RBP4.88□□□□□ -1.63
SCFD1-212ENST00000554486 IGSF23A1L1A6 192 aa4.87□□□□□ -1.63
SCFD1-212ENST00000554486 FAM24AA6NFZ4 105 aa4.87□□□□□ -1.63
SCFD1-212ENST00000554486 L7N2F9 121 aa4.87□□□□□ -1.63
SCFD1-212ENST00000554486 TSC22D2O75157 780 aa4.87□□□□□ -1.63
SCFD1-212ENST00000554486 IGHG4P01861 327 aa4.87□□□□□ -1.63
SCFD1-212ENST00000554486 PRH1P02810 166 aa4.87□□□□□ -1.63
SCFD1-212ENST00000554486 RLN2P04090 185 aa4.87□□□□□ -1.63
SCFD1-212ENST00000554486 SLC25A4P12235 298 aa4.87□□□□□ -1.63
SCFD1-212ENST00000554486 MDKP21741 143 aaPredicted RBP4.87□□□□□ -1.63
SCFD1-212ENST00000554486 NPY1RP25929 384 aa4.87□□□□□ -1.63
SCFD1-212ENST00000554486 HTR2BP41595 481 aa4.87□□□□□ -1.63
SCFD1-212ENST00000554486 FGL1Q08830 312 aa4.87□□□□□ -1.63
SCFD1-212ENST00000554486 TMEM267Q0VDI3 215 aaPredicted RBP4.87□□□□□ -1.63
SCFD1-212ENST00000554486 KLK9Q2XQG4 91 aa4.87□□□□□ -1.63
SCFD1-212ENST00000554486 C2orf83Q53S99 150 aa4.87□□□□□ -1.63
SCFD1-212ENST00000554486 SPANXN5Q5MJ07 72 aa4.87□□□□□ -1.63
SCFD1-212ENST00000554486 PVRIGQ6DKI7 326 aa4.87□□□□□ -1.63
SCFD1-212ENST00000554486 PRSS54Q6PEW0 395 aa4.87□□□□□ -1.63
SCFD1-212ENST00000554486 TMEM14EPQ6UXP3 125 aa4.87□□□□□ -1.63
SCFD1-212ENST00000554486 HSD17B13Q7Z5P4 300 aaPredicted RBP4.87□□□□□ -1.63
SCFD1-212ENST00000554486 ZNF329Q86UD4 541 aa4.87□□□□□ -1.63
SCFD1-212ENST00000554486 HAPLN4Q86UW8 402 aa4.87□□□□□ -1.63
SCFD1-212ENST00000554486 SLC24A4Q8NFF2 622 aa4.87□□□□□ -1.63
SCFD1-212ENST00000554486 OR11H4Q8NGC9 324 aa4.87□□□□□ -1.63
SCFD1-212ENST00000554486 OR1P1Q8NH06 330 aa4.87□□□□□ -1.63
SCFD1-212ENST00000554486 OR4F5Q8NH21 305 aa4.87□□□□□ -1.63
SCFD1-212ENST00000554486 CIB3Q96Q77 187 aaPredicted RBP4.87□□□□□ -1.63
SCFD1-212ENST00000554486 HIPK2Q9H2X6 1198 aa4.87□□□□□ -1.63
SCFD1-212ENST00000554486 ZFP57Q9NU63 452 aa4.87□□□□□ -1.63
SCFD1-212ENST00000554486 PSENENQ9NZ42 101 aa4.87□□□□□ -1.63
SCFD1-212ENST00000554486 KLK9Q9UKQ9 250 aa4.87□□□□□ -1.63
SCFD1-212ENST00000554486 U3KQ87 197 aa4.87□□□□□ -1.63
SCFD1-212ENST00000554486 ANK2Q01484 3957 aa4.87□□□□□ -1.63
SCFD1-212ENST00000554486 CMYA5Q8N3K9 4069 aa4.86□□□□□ -1.63
SCFD1-212ENST00000554486 COL6A5A8TX70 2615 aa4.86□□□□□ -1.63
SCFD1-212ENST00000554486 IGLV11-55A0A075B6I3 123 aa4.86□□□□□ -1.63
SCFD1-212ENST00000554486 FXYD6-FXYD2A0A087WZ82 144 aa4.86□□□□□ -1.63
SCFD1-212ENST00000554486 TRBV9A0A0B4J1U6 114 aa4.86□□□□□ -1.63
SCFD1-212ENST00000554486 CLPSL1A2RUU4 121 aa4.86□□□□□ -1.63
SCFD1-212ENST00000554486 PSMB11A5LHX3 300 aa4.86□□□□□ -1.63
SCFD1-212ENST00000554486 PMS2P5A8MQ11 134 aa4.86□□□□□ -1.63
SCFD1-212ENST00000554486 PRSS46E5RG02 174 aa4.86□□□□□ -1.63
SCFD1-212ENST00000554486 E5RGE8 158 aa4.86□□□□□ -1.63
SCFD1-212ENST00000554486 BRI3O95415 125 aa4.86□□□□□ -1.63
SCFD1-212ENST00000554486 IFNA10P01566 189 aa4.86□□□□□ -1.63
SCFD1-212ENST00000554486 METTL15P1P0C7V9 234 aa4.86□□□□□ -1.63
SCFD1-212ENST00000554486 PET100P0DJ07 73 aa4.86□□□□□ -1.63
SCFD1-212ENST00000554486 PVALBP20472 110 aaPredicted RBP4.86□□□□□ -1.63
SCFD1-212ENST00000554486 PSMB8P28062 276 aa4.86□□□□□ -1.63
SCFD1-212ENST00000554486 SNCAP37840 140 aa4.86□□□□□ -1.63
SCFD1-212ENST00000554486 P2RY1P47900 373 aa4.86□□□□□ -1.63
SCFD1-212ENST00000554486 RPL23AP62750 156 aaKnown RBP4.86□□□□□ -1.63
SCFD1-212ENST00000554486 DEFA5Q01523 94 aa4.86□□□□□ -1.63
SCFD1-212ENST00000554486 ARL16Q0P5N6 197 aa4.86□□□□□ -1.63
SCFD1-212ENST00000554486 KIAA0141Q14154 515 aaPredicted RBP4.86□□□□□ -1.63
SCFD1-212ENST00000554486 KRTAP24-1Q3LI83 254 aa4.86□□□□□ -1.63
SCFD1-212ENST00000554486 SLC25A24Q6NUK1 477 aa4.86□□□□□ -1.63
SCFD1-212ENST00000554486 TMEM252Q8N6L7 170 aa4.86□□□□□ -1.63
SCFD1-212ENST00000554486 KLHDC1Q8N7A1 406 aa4.86□□□□□ -1.63
SCFD1-212ENST00000554486 THAP6Q8TBB0 222 aa4.86□□□□□ -1.63
SCFD1-212ENST00000554486 DCUN1D4Q92564 292 aa4.86□□□□□ -1.63
SCFD1-212ENST00000554486 BSCL2Q96G97 398 aaPredicted RBP4.86□□□□□ -1.63
SCFD1-212ENST00000554486 FNDC4Q9H6D8 234 aaPredicted RBP4.86□□□□□ -1.63
SCFD1-212ENST00000554486 LYRM2Q9NU23 88 aaPredicted RBP4.86□□□□□ -1.63
SCFD1-212ENST00000554486 STRAPQ9Y3F4 350 aaKnown RBP4.86□□□□□ -1.63
SCFD1-212ENST00000554486 TMEM89A2RUT3 159 aa4.85□□□□□ -1.63
SCFD1-212ENST00000554486 RNF222A6NCQ9 220 aa4.85□□□□□ -1.63
SCFD1-212ENST00000554486 PGPEP1LA6NFU8 196 aa4.85□□□□□ -1.63
SCFD1-212ENST00000554486 KRTAP29-1A8MX34 341 aaPredicted RBP4.85□□□□□ -1.63
SCFD1-212ENST00000554486 H3BUA1 57 aa4.85□□□□□ -1.63
SCFD1-212ENST00000554486 I3L2K1 104 aa4.85□□□□□ -1.63
SCFD1-212ENST00000554486 K7EIM0 57 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms