RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 SH3BGRL3Q9H299 93 aa5.97□□□□□ -1.45
TDP1-209ENST00000554180 C16orf95Q9H693 158 aa5.97□□□□□ -1.45
TDP1-209ENST00000554180 SERTAD4Q9NUC0 356 aa5.97□□□□□ -1.45
TDP1-209ENST00000554180 LINC00527Q9UJ94 153 aa5.97□□□□□ -1.45
TDP1-209ENST00000554180 SLC45A2Q9UMX9 530 aa5.97□□□□□ -1.45
TDP1-209ENST00000554180 C2CD3Q4AC94 2353 aa5.97□□□□□ -1.45
TDP1-209ENST00000554180 JMJD1CQ15652 2540 aa5.97□□□□□ -1.45
TDP1-209ENST00000554180 SETD2Q9BYW2 2564 aaPredicted RBP5.96□□□□□ -1.46
TDP1-209ENST00000554180 IGKV1D-37A0A075B6S9 117 aa5.96□□□□□ -1.46
TDP1-209ENST00000554180 PSMB11A5LHX3 300 aa5.96□□□□□ -1.46
TDP1-209ENST00000554180 MFSD2BA6NFX1 497 aa5.96□□□□□ -1.46
TDP1-209ENST00000554180 GNG7O60262 68 aa5.96□□□□□ -1.46
TDP1-209ENST00000554180 NDUFB8O95169 186 aa5.96□□□□□ -1.46
TDP1-209ENST00000554180 TSPAN15O95858 294 aa5.96□□□□□ -1.46
TDP1-209ENST00000554180 RAB9AP51151 201 aa5.96□□□□□ -1.46
TDP1-209ENST00000554180 TPPP2P59282 170 aa5.96□□□□□ -1.46
TDP1-209ENST00000554180 RAB14P61106 215 aa5.96□□□□□ -1.46
TDP1-209ENST00000554180 B2MP61769 119 aa5.96□□□□□ -1.46
TDP1-209ENST00000554180 PRR20EP86478 221 aa5.96□□□□□ -1.46
TDP1-209ENST00000554180 PRR20CP86479 221 aa5.96□□□□□ -1.46
TDP1-209ENST00000554180 PRR20DP86480 221 aa5.96□□□□□ -1.46
TDP1-209ENST00000554180 PRR20BP86481 221 aa5.96□□□□□ -1.46
TDP1-209ENST00000554180 PRR20AP86496 221 aa5.96□□□□□ -1.46
TDP1-209ENST00000554180 ATP5G2Q06055 141 aa5.96□□□□□ -1.46
TDP1-209ENST00000554180 PXDC1Q5TGL8 231 aa5.96□□□□□ -1.46
TDP1-209ENST00000554180 CYP2G1PQ6ZSU1 146 aa5.96□□□□□ -1.46
TDP1-209ENST00000554180 STPG3Q8N7X2 389 aa5.96□□□□□ -1.46
TDP1-209ENST00000554180 MYOZ3Q8TDC0 251 aa5.96□□□□□ -1.46
TDP1-209ENST00000554180 SAT2Q96F10 170 aaPredicted RBP5.96□□□□□ -1.46
TDP1-209ENST00000554180 SLC39A9Q9NUM3 307 aa5.96□□□□□ -1.46
TDP1-209ENST00000554180 MRPL36Q9P0J6 103 aaKnown RBP5.96□□□□□ -1.46
TDP1-209ENST00000554180 PXMP4Q9Y6I8 212 aa5.96□□□□□ -1.46
TDP1-209ENST00000554180 NF1P21359 2839 aa5.96□□□□□ -1.46
TDP1-209ENST00000554180 TEP1Q99973 2627 aaKnown RBP5.95□□□□□ -1.46
TDP1-209ENST00000554180 IGHV3-21A0A0B4J1V1 117 aa5.95□□□□□ -1.46
TDP1-209ENST00000554180 F8W735 103 aaPredicted RBP5.95□□□□□ -1.46
TDP1-209ENST00000554180 IGKV1-17P01599 117 aa5.95□□□□□ -1.46
TDP1-209ENST00000554180 IGHV3-48P01763 117 aa5.95□□□□□ -1.46
TDP1-209ENST00000554180 PF4V1P10720 104 aa5.95□□□□□ -1.46
TDP1-209ENST00000554180 M6PRP20645 277 aa5.95□□□□□ -1.46
TDP1-209ENST00000554180 YPEL3P61236 119 aaPredicted RBP5.95□□□□□ -1.46
TDP1-209ENST00000554180 BLOC1S1P78537 153 aa5.95□□□□□ -1.46
TDP1-209ENST00000554180 ACOT6Q3I5F7 207 aaPredicted RBP5.95□□□□□ -1.46
TDP1-209ENST00000554180 Q56UQ5 140 aa5.95□□□□□ -1.46
TDP1-209ENST00000554180 TMEM41BQ5BJD5 291 aa5.95□□□□□ -1.46
TDP1-209ENST00000554180 CLLU1Q5K131 121 aa5.95□□□□□ -1.46
TDP1-209ENST00000554180 FFAR4Q5NUL3 377 aa5.95□□□□□ -1.46
TDP1-209ENST00000554180 FAM74A1Q5RGS3 127 aa5.95□□□□□ -1.46
TDP1-209ENST00000554180 SPSB3Q6PJ21 355 aa5.95□□□□□ -1.46
TDP1-209ENST00000554180 TMEM182Q6ZP80 229 aaPredicted RBP5.95□□□□□ -1.46
TDP1-209ENST00000554180 Q6ZRG5 221 aa5.95□□□□□ -1.46
TDP1-209ENST00000554180 BPIFCQ8NFQ6 507 aa5.95□□□□□ -1.46
TDP1-209ENST00000554180 WFDC12Q8WWY7 111 aa5.95□□□□□ -1.46
TDP1-209ENST00000554180 CCDC140Q96MF4 163 aa5.95□□□□□ -1.46
TDP1-209ENST00000554180 MS4A10Q96PG2 267 aa5.95□□□□□ -1.46
TDP1-209ENST00000554180 C19orf24Q9BVV8 132 aa5.95□□□□□ -1.46
TDP1-209ENST00000554180 ZFHX3Q15911 3703 aa5.95□□□□□ -1.46
TDP1-209ENST00000554180 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.94□□□□□ -1.46
TDP1-209ENST00000554180 A0A1B0GUS0 222 aa5.94□□□□□ -1.46
TDP1-209ENST00000554180 ZNF705EA8MWA4 302 aaPredicted RBP5.94□□□□□ -1.46
TDP1-209ENST00000554180 SEC14L6B5MCN3 397 aa5.94□□□□□ -1.46
TDP1-209ENST00000554180 NUPL2O15504 423 aaKnown RBP5.94□□□□□ -1.46
TDP1-209ENST00000554180 YIF1AO95070 293 aa5.94□□□□□ -1.46
TDP1-209ENST00000554180 TOMM40O96008 361 aa5.94□□□□□ -1.46
TDP1-209ENST00000554180 CTSGP08311 255 aa5.94□□□□□ -1.46
TDP1-209ENST00000554180 NMBP08949 121 aa5.94□□□□□ -1.46
TDP1-209ENST00000554180 LINC00869P0C866 280 aa5.94□□□□□ -1.46
TDP1-209ENST00000554180 ELLP55199 621 aaPredicted RBP5.94□□□□□ -1.46
TDP1-209ENST00000554180 PLP1P60201 277 aa5.94□□□□□ -1.46
TDP1-209ENST00000554180 ZNF90Q03938 601 aa5.94□□□□□ -1.46
TDP1-209ENST00000554180 ZNF616Q08AN1 781 aa5.94□□□□□ -1.46
TDP1-209ENST00000554180 MIC13Q5XKP0 118 aa5.94□□□□□ -1.46
TDP1-209ENST00000554180 ZNF343Q6P1L6 599 aa5.94□□□□□ -1.46
TDP1-209ENST00000554180 ZNF329Q86UD4 541 aa5.94□□□□□ -1.46
TDP1-209ENST00000554180 KLHDC1Q8N7A1 406 aa5.94□□□□□ -1.46
TDP1-209ENST00000554180 OR4X2Q8NGF9 303 aa5.94□□□□□ -1.46
TDP1-209ENST00000554180 OR4F5Q8NH21 305 aa5.94□□□□□ -1.46
TDP1-209ENST00000554180 WIPF2Q8TF74 440 aaPredicted RBP5.94□□□□□ -1.46
TDP1-209ENST00000554180 GATAD1Q8WUU5 269 aa5.94□□□□□ -1.46
TDP1-209ENST00000554180 PFDN5Q99471 154 aa5.94□□□□□ -1.46
TDP1-209ENST00000554180 RNF2Q99496 336 aa5.94□□□□□ -1.46
TDP1-209ENST00000554180 KLK15Q9H2R5 256 aa5.94□□□□□ -1.46
TDP1-209ENST00000554180 RPRMQ9NS64 109 aa5.94□□□□□ -1.46
TDP1-209ENST00000554180 PLA2G2EQ9NZK7 142 aa5.94□□□□□ -1.46
TDP1-209ENST00000554180 ELOA3CA0A087WX78 387 aaPredicted RBP5.93□□□□□ -1.46
TDP1-209ENST00000554180 TRAV1-1A0A0B4J248 108 aa5.93□□□□□ -1.46
TDP1-209ENST00000554180 OR2T8A6NH00 312 aa5.93□□□□□ -1.46
TDP1-209ENST00000554180 TGOLN2O43493 480 aa5.93□□□□□ -1.46
TDP1-209ENST00000554180 OR2C1O95371 312 aa5.93□□□□□ -1.46
TDP1-209ENST00000554180 CLEC3BP05452 202 aa5.93□□□□□ -1.46
TDP1-209ENST00000554180 RD3LP0DJH9 198 aa5.93□□□□□ -1.46
TDP1-209ENST00000554180 PSG1P11464 419 aa5.93□□□□□ -1.46
TDP1-209ENST00000554180 GPR183P32249 361 aa5.93□□□□□ -1.46
TDP1-209ENST00000554180 ADMP35318 185 aa5.93□□□□□ -1.46
TDP1-209ENST00000554180 RAB2AP61019 212 aa5.93□□□□□ -1.46
TDP1-209ENST00000554180 DEFA5Q01523 94 aa5.93□□□□□ -1.46
TDP1-209ENST00000554180 RELQ04864 619 aaPredicted RBP5.93□□□□□ -1.46
TDP1-209ENST00000554180 TIGITQ495A1 244 aa5.93□□□□□ -1.46
TDP1-209ENST00000554180 ZNF600Q6ZNG1 722 aa5.93□□□□□ -1.46
TDP1-209ENST00000554180 S100A7AQ86SG5 101 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms