RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 A0A1B0GW15 77 aa1.94□□□□□ -2.1
PRPF39-205ENST00000554081 RPS10-NUDT3A0A1W2PQS6 291 aa1.94□□□□□ -2.1
PRPF39-205ENST00000554081 SNRPGP15A8MWD9 76 aa1.94□□□□□ -2.1
PRPF39-205ENST00000554081 E7EUB6 86 aa1.94□□□□□ -2.1
PRPF39-205ENST00000554081 GABARAPH6UMI1 98 aa1.94□□□□□ -2.1
PRPF39-205ENST00000554081 CLDN34H7C241 214 aa1.94□□□□□ -2.1
PRPF39-205ENST00000554081 FGF16O43320 207 aa1.94□□□□□ -2.1
PRPF39-205ENST00000554081 MED6O75586 246 aa1.94□□□□□ -2.1
PRPF39-205ENST00000554081 DEDDO75618 318 aa1.94□□□□□ -2.1
PRPF39-205ENST00000554081 GABARAPO95166 117 aa1.94□□□□□ -2.1
PRPF39-205ENST00000554081 NUDT3O95989 172 aa1.94□□□□□ -2.1
PRPF39-205ENST00000554081 NBEAP1P0C6P0 100 aa1.94□□□□□ -2.1
PRPF39-205ENST00000554081 SMIM6P0DI80 62 aa1.94□□□□□ -2.1
PRPF39-205ENST00000554081 S100PP25815 95 aa1.94□□□□□ -2.1
PRPF39-205ENST00000554081 GPX4P36969 197 aaPredicted RBP1.94□□□□□ -2.1
PRPF39-205ENST00000554081 CDX1P47902 265 aaPredicted RBP1.94□□□□□ -2.1
PRPF39-205ENST00000554081 MEOX2P50222 304 aa1.94□□□□□ -2.1
PRPF39-205ENST00000554081 CLINT1Q14677 625 aa1.94□□□□□ -2.1
PRPF39-205ENST00000554081 ZNF660Q6AZW8 331 aaPredicted RBP1.94□□□□□ -2.1
PRPF39-205ENST00000554081 TCF24Q7RTU0 167 aa1.94□□□□□ -2.1
PRPF39-205ENST00000554081 ZNF429Q86V71 674 aa1.94□□□□□ -2.1
PRPF39-205ENST00000554081 NR2C2APQ86WQ0 139 aa1.94□□□□□ -2.1
PRPF39-205ENST00000554081 PDPNQ86YL7 162 aa1.94□□□□□ -2.1
PRPF39-205ENST00000554081 ZNF645Q8N7E2 425 aa1.94□□□□□ -2.1
PRPF39-205ENST00000554081 OR9G4Q8NGQ1 327 aa1.94□□□□□ -2.1
PRPF39-205ENST00000554081 BSCL2Q96G97 398 aaPredicted RBP1.94□□□□□ -2.1
PRPF39-205ENST00000554081 SLC35E1Q96K37 410 aa1.94□□□□□ -2.1
PRPF39-205ENST00000554081 UHRF2Q96PU4 802 aa1.94□□□□□ -2.1
PRPF39-205ENST00000554081 RARRES2Q99969 163 aa1.94□□□□□ -2.1
PRPF39-205ENST00000554081 GINS3Q9BRX5 216 aa1.94□□□□□ -2.1
PRPF39-205ENST00000554081 RHPN1-AS1Q9BWJ2 59 aa1.94□□□□□ -2.1
PRPF39-205ENST00000554081 YTHDF1Q9BYJ9 559 aaKnown RBP1.94□□□□□ -2.1
PRPF39-205ENST00000554081 CDIP1Q9H305 208 aa1.94□□□□□ -2.1
PRPF39-205ENST00000554081 OR51M1Q9H341 326 aa1.94□□□□□ -2.1
PRPF39-205ENST00000554081 SLA2Q9H6Q3 261 aa1.94□□□□□ -2.1
PRPF39-205ENST00000554081 SLC2A9Q9NRM0 540 aa1.94□□□□□ -2.1
PRPF39-205ENST00000554081 NDUFB11Q9NX14 153 aa1.94□□□□□ -2.1
PRPF39-205ENST00000554081 CCDC59Q9P031 241 aaKnown RBP1.94□□□□□ -2.1
PRPF39-205ENST00000554081 MEGF8Q7Z7M0 2845 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 A0A087WWL8 130 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 ELOA3CA0A087WX78 387 aaPredicted RBP1.93□□□□□ -2.1
PRPF39-205ENST00000554081 TRAV14DV4A0A0A6YYC5 116 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 FBLL1A6NHQ2 334 aaKnown RBP1.93□□□□□ -2.1
PRPF39-205ENST00000554081 OOSP1A8MZH6 123 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 ARPC1BO15143 372 aaKnown RBP1.93□□□□□ -2.1
PRPF39-205ENST00000554081 SSSCA1O60232 199 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 PGLYRP1O75594 196 aaPredicted RBP1.93□□□□□ -2.1
PRPF39-205ENST00000554081 NDUFA7O95182 113 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 IL6RP08887 468 aaPredicted RBP1.93□□□□□ -2.1
PRPF39-205ENST00000554081 LGALS1P09382 135 aaKnown RBP1.93□□□□□ -2.1
PRPF39-205ENST00000554081 METTL15P1P0C7V9 234 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 CAMPP49913 170 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 MFAP2P55001 183 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 DLX6P56179 175 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 KRTAP10-11P60412 298 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 KLF9Q13886 244 aaPredicted RBP1.93□□□□□ -2.1
PRPF39-205ENST00000554081 LCN12Q6JVE5 192 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 UNQ9165/PRO28630Q6UXU0 137 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 LYZL2Q7Z4W2 148 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 STPG3Q8N7X2 389 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 DUSP18Q8NEJ0 188 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 SCARB1Q8WTV0 552 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 Q8WTZ3 238 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 SGK494Q96LW2 274 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 SOSTQ9BQB4 213 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 SLC25A39Q9BZJ4 359 aaPredicted RBP1.93□□□□□ -2.1
PRPF39-205ENST00000554081 URGCP-MRPS24S4R325 110 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 C3orf85A0A1B0GTC6 90 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 ODF3BA8MYP8 253 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 TCAPO15273 167 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 ADAP1O75689 374 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 SCGNO76038 276 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 SIX6O95475 246 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 HPRT1P00492 218 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 IGHV3-53P01767 116 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 AKAIN1P0CW23 69 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 IGFBP3P17936 291 aaPredicted RBP1.93□□□□□ -2.1
PRPF39-205ENST00000554081 SSBP2P81877 361 aaPredicted RBP1.93□□□□□ -2.1
PRPF39-205ENST00000554081 DHODHQ02127 395 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 DHRS2Q13268 280 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 FOXE3Q13461 319 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 KRTAP27-1Q3LI81 207 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 TIGITQ495A1 244 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 LINC01559Q495D7 138 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 UBE2NLQ5JXB2 153 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 C1orf100Q5SVJ3 147 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 C16orf82Q7Z2V1 217 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 SLC25A42Q86VD7 318 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 PUSL1Q8N0Z8 303 aaKnown RBP1.93□□□□□ -2.1
PRPF39-205ENST00000554081 ZNF491Q8N8L2 437 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 OR13C8Q8NGS7 320 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 ZFAND1Q8TCF1 268 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 METTL26Q96S19 204 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 RAB40CQ96S21 281 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 RNF2Q99496 336 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 GFI1Q99684 422 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 THAP7Q9BT49 309 aaPredicted RBP1.93□□□□□ -2.1
PRPF39-205ENST00000554081 NMES1Q9C002 83 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 TMEM231Q9H6L2 316 aa1.93□□□□□ -2.1
PRPF39-205ENST00000554081 GSN-AS1Q9NRJ2 163 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms