RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 HBE1P02100 147 aa4.72□□□□□ -1.65
ATXN3-224ENST00000554040 HLA-DRB4P13762 266 aa4.72□□□□□ -1.65
ATXN3-224ENST00000554040 HIST1H1DP16402 221 aaKnown RBP4.72□□□□□ -1.65
ATXN3-224ENST00000554040 GADD45AP24522 165 aa4.72□□□□□ -1.65
ATXN3-224ENST00000554040 RANBP1P43487 201 aa4.72□□□□□ -1.65
ATXN3-224ENST00000554040 SNRPD3P62318 126 aaKnown RBP4.72□□□□□ -1.65
ATXN3-224ENST00000554040 C1orf146Q5VVC0 180 aa4.72□□□□□ -1.65
ATXN3-224ENST00000554040 MZT2AQ6P582 158 aa4.72□□□□□ -1.65
ATXN3-224ENST00000554040 CNIH2Q6PI25 160 aa4.72□□□□□ -1.65
ATXN3-224ENST00000554040 Q6ZRN7 208 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-224ENST00000554040 CADM3Q8N126 398 aa4.72□□□□□ -1.65
ATXN3-224ENST00000554040 TMEM56Q96MV1 263 aa4.72□□□□□ -1.65
ATXN3-224ENST00000554040 KRTAP2-2Q9BYT5 123 aa4.72□□□□□ -1.65
ATXN3-224ENST00000554040 CCL28Q9NRJ3 127 aa4.72□□□□□ -1.65
ATXN3-224ENST00000554040 ELF5Q9UKW6 265 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-224ENST00000554040 NSG2Q9Y328 171 aa4.72□□□□□ -1.65
ATXN3-224ENST00000554040 HLA-DRB4X5D2U9 266 aa4.72□□□□□ -1.65
ATXN3-224ENST00000554040 FAM90A26D6RGX4 464 aa4.71□□□□□ -1.66
ATXN3-224ENST00000554040 MYL12BO14950 172 aa4.71□□□□□ -1.66
ATXN3-224ENST00000554040 NKX2-1P43699 371 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-224ENST00000554040 EIF2B2P49770 351 aaKnown RBP4.71□□□□□ -1.66
ATXN3-224ENST00000554040 PPP5CP53041 499 aa4.71□□□□□ -1.66
ATXN3-224ENST00000554040 AP2S1P53680 142 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-224ENST00000554040 FXYD7P58549 80 aa4.71□□□□□ -1.66
ATXN3-224ENST00000554040 LINC00315P59091 139 aa4.71□□□□□ -1.66
ATXN3-224ENST00000554040 ERVK-16P61578 105 aa4.71□□□□□ -1.66
ATXN3-224ENST00000554040 CATR1Q13166 79 aa4.71□□□□□ -1.66
ATXN3-224ENST00000554040 RRN3P1Q2M238 152 aa4.71□□□□□ -1.66
ATXN3-224ENST00000554040 C1orf158Q8N1D5 194 aa4.71□□□□□ -1.66
ATXN3-224ENST00000554040 NANOGP1Q8N7R0 232 aa4.71□□□□□ -1.66
ATXN3-224ENST00000554040 SECTM1Q8WVN6 248 aa4.71□□□□□ -1.66
ATXN3-224ENST00000554040 PYDC1Q8WXC3 89 aa4.71□□□□□ -1.66
ATXN3-224ENST00000554040 PINX1Q96BK5 328 aaKnown RBP4.71□□□□□ -1.66
ATXN3-224ENST00000554040 NARS2Q96I59 477 aaKnown RBP4.71□□□□□ -1.66
ATXN3-224ENST00000554040 UPK3BQ9BT76 320 aa4.71□□□□□ -1.66
ATXN3-224ENST00000554040 ZNF586Q9NXT0 402 aa4.71□□□□□ -1.66
ATXN3-224ENST00000554040 FKBP11Q9NYL4 201 aa4.71□□□□□ -1.66
ATXN3-224ENST00000554040 COMMD9Q9P000 198 aa4.71□□□□□ -1.66
ATXN3-224ENST00000554040 GOLT1BQ9Y3E0 138 aa4.71□□□□□ -1.66
ATXN3-224ENST00000554040 LYRM9A8MSI8 78 aa4.7□□□□□ -1.66
ATXN3-224ENST00000554040 SNAPC5O75971 98 aa4.7□□□□□ -1.66
ATXN3-224ENST00000554040 NXPH3O95157 252 aa4.7□□□□□ -1.66
ATXN3-224ENST00000554040 IGKV3-20P01619 116 aa4.7□□□□□ -1.66
ATXN3-224ENST00000554040 DEFB130BP0DP73 79 aa4.7□□□□□ -1.66
ATXN3-224ENST00000554040 DEFB130AP0DP74 79 aa4.7□□□□□ -1.66
ATXN3-224ENST00000554040 ERVFC1-1P60608 527 aa4.7□□□□□ -1.66
ATXN3-224ENST00000554040 HAMPP81172 84 aa4.7□□□□□ -1.66
ATXN3-224ENST00000554040 ARL6IP1Q15041 203 aa4.7□□□□□ -1.66
ATXN3-224ENST00000554040 CDNFQ49AH0 187 aa4.7□□□□□ -1.66
ATXN3-224ENST00000554040 RNASE12Q5GAN4 147 aaKnown RBP4.7□□□□□ -1.66
ATXN3-224ENST00000554040 GDF5OSQ5U4N7 250 aa4.7□□□□□ -1.66
ATXN3-224ENST00000554040 TPRA1Q86W33 373 aa4.7□□□□□ -1.66
ATXN3-224ENST00000554040 ZNF709Q8N972 641 aa4.7□□□□□ -1.66
ATXN3-224ENST00000554040 ZNF114Q8NC26 417 aa4.7□□□□□ -1.66
ATXN3-224ENST00000554040 ZNF555Q8NEP9 628 aa4.7□□□□□ -1.66
ATXN3-224ENST00000554040 DEFB104AQ8WTQ1 72 aa4.7□□□□□ -1.66
ATXN3-224ENST00000554040 C7orf50Q9BRJ6 194 aaKnown RBP4.7□□□□□ -1.66
ATXN3-224ENST00000554040 PRNDQ9UKY0 176 aa4.7□□□□□ -1.66
ATXN3-224ENST00000554040 V9GY05 133 aa4.7□□□□□ -1.66
ATXN3-224ENST00000554040 METTL21EPA6NDL7 271 aa4.69□□□□□ -1.66
ATXN3-224ENST00000554040 ATP5G1P05496 136 aa4.69□□□□□ -1.66
ATXN3-224ENST00000554040 FCGR2CP31995 323 aa4.69□□□□□ -1.66
ATXN3-224ENST00000554040 ATP5G3P48201 142 aa4.69□□□□□ -1.66
ATXN3-224ENST00000554040 ARPC4P59998 168 aa4.69□□□□□ -1.66
ATXN3-224ENST00000554040 ESRGQ1W209 222 aa4.69□□□□□ -1.66
ATXN3-224ENST00000554040 TMEM69Q5SWH9 247 aa4.69□□□□□ -1.66
ATXN3-224ENST00000554040 HES5Q5TA89 166 aa4.69□□□□□ -1.66
ATXN3-224ENST00000554040 HACD4Q5VWC8 232 aa4.69□□□□□ -1.66
ATXN3-224ENST00000554040 C16orf54Q6UWD8 224 aa4.69□□□□□ -1.66
ATXN3-224ENST00000554040 TMEM91Q6ZNR0 172 aa4.69□□□□□ -1.66
ATXN3-224ENST00000554040 OR51H1Q8NH63 302 aa4.69□□□□□ -1.66
ATXN3-224ENST00000554040 GLMPQ8WWB7 406 aa4.69□□□□□ -1.66
ATXN3-224ENST00000554040 TMEM230Q96A57 120 aa4.69□□□□□ -1.66
ATXN3-224ENST00000554040 UHRF2Q96PU4 802 aa4.69□□□□□ -1.66
ATXN3-224ENST00000554040 C9orf16Q9BUW7 83 aa4.69□□□□□ -1.66
ATXN3-224ENST00000554040 SLC5A7Q9GZV3 580 aa4.69□□□□□ -1.66
ATXN3-224ENST00000554040 MAGT1Q9H0U3 335 aa4.69□□□□□ -1.66
ATXN3-224ENST00000554040 ANXA10Q9UJ72 324 aa4.69□□□□□ -1.66
ATXN3-224ENST00000554040 TNXBP22105 4242 aa4.69□□□□□ -1.66
ATXN3-224ENST00000554040 CBY3A6NI87 242 aa4.68□□□□□ -1.66
ATXN3-224ENST00000554040 CLN5O75503 358 aa4.68□□□□□ -1.66
ATXN3-224ENST00000554040 ARL6IP5O75915 188 aa4.68□□□□□ -1.66
ATXN3-224ENST00000554040 KRASP01116 189 aa4.68□□□□□ -1.66
ATXN3-224ENST00000554040 PPYP01298 95 aa4.68□□□□□ -1.66
ATXN3-224ENST00000554040 G6PCP35575 357 aa4.68□□□□□ -1.66
ATXN3-224ENST00000554040 UCP3P55916 312 aa4.68□□□□□ -1.66
ATXN3-224ENST00000554040 DEFB1P60022 68 aa4.68□□□□□ -1.66
ATXN3-224ENST00000554040 ERHP84090 104 aaKnown RBP4.68□□□□□ -1.66
ATXN3-224ENST00000554040 PSG9Q00887 426 aa4.68□□□□□ -1.66
ATXN3-224ENST00000554040 AADACL3Q5VUY0 350 aa4.68□□□□□ -1.66
ATXN3-224ENST00000554040 FOXI2Q6ZQN5 318 aa4.68□□□□□ -1.66
ATXN3-224ENST00000554040 ZNF818PQ6ZRF7 136 aa4.68□□□□□ -1.66
ATXN3-224ENST00000554040 OR13F1Q8NGS4 319 aa4.68□□□□□ -1.66
ATXN3-224ENST00000554040 TMEM203Q969S6 136 aa4.68□□□□□ -1.66
ATXN3-224ENST00000554040 TSC22D3Q99576 134 aa4.68□□□□□ -1.66
ATXN3-224ENST00000554040 SLC35B3Q9H1N7 401 aa4.68□□□□□ -1.66
ATXN3-224ENST00000554040 SAV1Q9H4B6 383 aaPredicted RBP4.68□□□□□ -1.66
ATXN3-224ENST00000554040 NRN1Q9NPD7 142 aa4.68□□□□□ -1.66
ATXN3-224ENST00000554040 PSORS1C1Q9UIG5 152 aa4.68□□□□□ -1.66
ATXN3-224ENST00000554040 MRPS16Q9Y3D3 137 aaKnown RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms