RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, human

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-208	ENST00000553846	IZUMO4	Q1ZYL8	232 aa		6.26	□□□□□ -1.41
PRKCH-208	ENST00000553846	SPINK9	Q5DT21	86 aa		6.26	□□□□□ -1.41
PRKCH-208	ENST00000553846	TTC32	Q5I0X7	151 aa		6.26	□□□□□ -1.41
PRKCH-208	ENST00000553846	CDPF1	Q6NVV7	123 aa		6.26	□□□□□ -1.41
PRKCH-208	ENST00000553846	AMTN	Q6UX39	209 aa		6.26	□□□□□ -1.41
PRKCH-208	ENST00000553846	GSG1L	Q6UXU4	331 aa		6.26	□□□□□ -1.41
PRKCH-208	ENST00000553846	FOXI2	Q6ZQN5	318 aa		6.26	□□□□□ -1.41
PRKCH-208	ENST00000553846	TPRA1	Q86W33	373 aa		6.26	□□□□□ -1.41
PRKCH-208	ENST00000553846	BORCS5	Q969J3	196 aa		6.26	□□□□□ -1.41
PRKCH-208	ENST00000553846	WDR12	Q9GZL7	423 aa	Known RBP	6.26	□□□□□ -1.41
PRKCH-208	ENST00000553846		Q9H8V8	135 aa		6.26	□□□□□ -1.41
PRKCH-208	ENST00000553846		A0A0B4J293	547 aa		6.25	□□□□□ -1.41
PRKCH-208	ENST00000553846	RPS10-NUDT3	A0A1W2PQS6	291 aa		6.25	□□□□□ -1.41
PRKCH-208	ENST00000553846	LYRM9	A8MSI8	78 aa		6.25	□□□□□ -1.41
PRKCH-208	ENST00000553846	KRTAP29-1	A8MX34	341 aa	Predicted RBP	6.25	□□□□□ -1.41
PRKCH-208	ENST00000553846	NUDT3	O95989	172 aa		6.25	□□□□□ -1.41
PRKCH-208	ENST00000553846	IGKV1-5	P01602	117 aa		6.25	□□□□□ -1.41
PRKCH-208	ENST00000553846	IGKV3-20	P01619	116 aa		6.25	□□□□□ -1.41
PRKCH-208	ENST00000553846	FCER2	P06734	321 aa		6.25	□□□□□ -1.41
PRKCH-208	ENST00000553846	MYL9	P24844	172 aa		6.25	□□□□□ -1.41
PRKCH-208	ENST00000553846	EIF2B2	P49770	351 aa	Known RBP	6.25	□□□□□ -1.41
PRKCH-208	ENST00000553846	AP2S1	P53680	142 aa	Predicted RBP	6.25	□□□□□ -1.41
PRKCH-208	ENST00000553846	PRSS48	Q7RTY5	328 aa		6.25	□□□□□ -1.41
PRKCH-208	ENST00000553846	MRGPRF	Q96AM1	343 aa		6.25	□□□□□ -1.41
PRKCH-208	ENST00000553846	C17orf77	Q96MU5	243 aa		6.25	□□□□□ -1.41
PRKCH-208	ENST00000553846	AUNIP	Q9H7T9	357 aa		6.25	□□□□□ -1.41
PRKCH-208	ENST00000553846	CORT	O00230	105 aa		6.24	□□□□□ -1.41
PRKCH-208	ENST00000553846	GPR31	O00270	319 aa		6.24	□□□□□ -1.41
PRKCH-208	ENST00000553846	CRX	O43186	299 aa	Predicted RBP	6.24	□□□□□ -1.41
PRKCH-208	ENST00000553846	RGS10	O43665	173 aa		6.24	□□□□□ -1.41
PRKCH-208	ENST00000553846	NXPH3	O95157	252 aa		6.24	□□□□□ -1.41
PRKCH-208	ENST00000553846	NAT1	P18440	290 aa		6.24	□□□□□ -1.41
PRKCH-208	ENST00000553846	ELK1	P19419	428 aa		6.24	□□□□□ -1.41
PRKCH-208	ENST00000553846	TSPO	P30536	169 aa		6.24	□□□□□ -1.41
PRKCH-208	ENST00000553846	LINC00315	P59091	139 aa		6.24	□□□□□ -1.41
PRKCH-208	ENST00000553846	YPEL3	P61236	119 aa	Predicted RBP	6.24	□□□□□ -1.41
PRKCH-208	ENST00000553846	HERV-K104	P61576	105 aa		6.24	□□□□□ -1.41
PRKCH-208	ENST00000553846	ERH	P84090	104 aa	Known RBP	6.24	□□□□□ -1.41
PRKCH-208	ENST00000553846	TBCE	Q15813	527 aa	Predicted RBP	6.24	□□□□□ -1.41
PRKCH-208	ENST00000553846	RRN3P1	Q2M238	152 aa		6.24	□□□□□ -1.41
PRKCH-208	ENST00000553846	C22orf42	Q6IC83	251 aa		6.24	□□□□□ -1.41
PRKCH-208	ENST00000553846	SIGLEC15	Q6ZMC9	328 aa		6.24	□□□□□ -1.41
PRKCH-208	ENST00000553846	OR5H6	Q8NGV6	325 aa		6.24	□□□□□ -1.41
PRKCH-208	ENST00000553846	NARS2	Q96I59	477 aa	Known RBP	6.24	□□□□□ -1.41
PRKCH-208	ENST00000553846	CCDC90B	Q9GZT6	254 aa		6.24	□□□□□ -1.41
PRKCH-208	ENST00000553846	DAPK2	Q9UIK4	370 aa		6.24	□□□□□ -1.41
PRKCH-208	ENST00000553846	GOLT1B	Q9Y3E0	138 aa		6.24	□□□□□ -1.41
PRKCH-208	ENST00000553846	RNF213	Q63HN8	5207 aa		6.23	□□□□□ -1.41
PRKCH-208	ENST00000553846	PKHD1L1	Q86WI1	4243 aa		6.23	□□□□□ -1.41
PRKCH-208	ENST00000553846	TRAV18	A0A075B6X5	111 aa		6.23	□□□□□ -1.41
PRKCH-208	ENST00000553846		A0A0A6YYH2	397 aa		6.23	□□□□□ -1.41
PRKCH-208	ENST00000553846		A0A0J9YX75	114 aa		6.23	□□□□□ -1.41
PRKCH-208	ENST00000553846		A6NJ64	397 aa		6.23	□□□□□ -1.41
PRKCH-208	ENST00000553846		F6UB75	175 aa		6.23	□□□□□ -1.41
PRKCH-208	ENST00000553846	SMR3B	P02814	79 aa	Predicted RBP	6.23	□□□□□ -1.41
PRKCH-208	ENST00000553846	RFX2	P48378	723 aa		6.23	□□□□□ -1.41
PRKCH-208	ENST00000553846	PSMB3	P49720	205 aa		6.23	□□□□□ -1.41
PRKCH-208	ENST00000553846	RORC	P51449	518 aa		6.23	□□□□□ -1.41
PRKCH-208	ENST00000553846	PSG9	Q00887	426 aa		6.23	□□□□□ -1.41
PRKCH-208	ENST00000553846	DHODH	Q02127	395 aa		6.23	□□□□□ -1.41
PRKCH-208	ENST00000553846	AARD	Q4LEZ3	155 aa		6.23	□□□□□ -1.41
PRKCH-208	ENST00000553846	SPATA31B1P	Q5VZV4	182 aa		6.23	□□□□□ -1.41
PRKCH-208	ENST00000553846	SFXN4	Q6P4A7	337 aa		6.23	□□□□□ -1.41
PRKCH-208	ENST00000553846	PRSS54	Q6PEW0	395 aa		6.23	□□□□□ -1.41
PRKCH-208	ENST00000553846	H2BFWT	Q7Z2G1	175 aa		6.23	□□□□□ -1.41
PRKCH-208	ENST00000553846	OR1S2	Q8NGQ3	325 aa		6.23	□□□□□ -1.41
PRKCH-208	ENST00000553846	OR6F1	Q8NGZ6	308 aa		6.23	□□□□□ -1.41
PRKCH-208	ENST00000553846	OR4A16	Q8NH70	328 aa		6.23	□□□□□ -1.41
PRKCH-208	ENST00000553846	TMEM170A	Q8WVE7	144 aa		6.23	□□□□□ -1.41
PRKCH-208	ENST00000553846	TMEM230	Q96A57	120 aa		6.23	□□□□□ -1.41
PRKCH-208	ENST00000553846	GPR146	Q96CH1	333 aa		6.23	□□□□□ -1.41
PRKCH-208	ENST00000553846	ZNF503	Q96F45	646 aa		6.23	□□□□□ -1.41
PRKCH-208	ENST00000553846	IGF2BP2-AS1	Q96M15	143 aa		6.23	□□□□□ -1.41
PRKCH-208	ENST00000553846	ZNF2	Q9BSG1	426 aa	Predicted RBP	6.23	□□□□□ -1.41
PRKCH-208	ENST00000553846	SCPEP1	Q9HB40	452 aa		6.23	□□□□□ -1.41
PRKCH-208	ENST00000553846	EHF	Q9NZC4	300 aa		6.23	□□□□□ -1.41
PRKCH-208	ENST00000553846	TRAV30	A0A087WSZ9	112 aa		6.22	□□□□□ -1.41
PRKCH-208	ENST00000553846		F5H768	121 aa		6.22	□□□□□ -1.41
PRKCH-208	ENST00000553846	OPRK1	P41145	380 aa		6.22	□□□□□ -1.41
PRKCH-208	ENST00000553846	SCAND1	P57086	179 aa		6.22	□□□□□ -1.41
PRKCH-208	ENST00000553846	DLK1	P80370	383 aa		6.22	□□□□□ -1.41
PRKCH-208	ENST00000553846	ICAM4	Q14773	271 aa		6.22	□□□□□ -1.41
PRKCH-208	ENST00000553846	ESRG	Q1W209	222 aa		6.22	□□□□□ -1.41
PRKCH-208	ENST00000553846	PHLDA2	Q53GA4	152 aa		6.22	□□□□□ -1.41
PRKCH-208	ENST00000553846	TMEM69	Q5SWH9	247 aa		6.22	□□□□□ -1.41
PRKCH-208	ENST00000553846	FAM78B	Q5VT40	261 aa		6.22	□□□□□ -1.41
PRKCH-208	ENST00000553846		Q6ZSN1	163 aa		6.22	□□□□□ -1.41
PRKCH-208	ENST00000553846	TBC1D26	Q86UD7	250 aa		6.22	□□□□□ -1.41
PRKCH-208	ENST00000553846	CMTM1	Q8IZ96	169 aa		6.22	□□□□□ -1.41
PRKCH-208	ENST00000553846	TSPAN14	Q8NG11	270 aa		6.22	□□□□□ -1.41
PRKCH-208	ENST00000553846	C20orf173	Q96LM9	149 aa		6.22	□□□□□ -1.41
PRKCH-208	ENST00000553846	VCX	Q9H320	206 aa		6.22	□□□□□ -1.41
PRKCH-208	ENST00000553846	ZNF586	Q9NXT0	402 aa		6.22	□□□□□ -1.41
PRKCH-208	ENST00000553846	SCN3B	Q9NY72	215 aa		6.22	□□□□□ -1.41
PRKCH-208	ENST00000553846	MRPS16	Q9Y3D3	137 aa	Known RBP	6.22	□□□□□ -1.41
PRKCH-208	ENST00000553846		A0A0G2JRQ6	117 aa		6.21	□□□□□ -1.42
PRKCH-208	ENST00000553846	MEIS3P1	A6NDR6	274 aa		6.21	□□□□□ -1.42
PRKCH-208	ENST00000553846	CBY3	A6NI87	242 aa		6.21	□□□□□ -1.42
PRKCH-208	ENST00000553846	ZNF705G	A8MUZ8	300 aa	Predicted RBP	6.21	□□□□□ -1.42
PRKCH-208	ENST00000553846	IL4	P05112	153 aa		6.21	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms