RNA–Protein interactions for RNA: ENST00000553609.5

NEDD1-205, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-205ENST00000553609 SEPSECSQ9HD40 501 aaKnown RBP10.07□□□□□ -0.8
NEDD1-205ENST00000553609 HNRNPCP07910 306 aaKnown RBP eCLIP10.06□□□□□ -0.8
NEDD1-205ENST00000553609 EIF2B2P49770 351 aaKnown RBP10.06□□□□□ -0.8
NEDD1-205ENST00000553609 AP2S1P53680 142 aaPredicted RBP10.06□□□□□ -0.8
NEDD1-205ENST00000553609 EMP1P54849 157 aa10.06□□□□□ -0.8
NEDD1-205ENST00000553609 DEFB1P60022 68 aa10.06□□□□□ -0.8
NEDD1-205ENST00000553609 RND3P61587 244 aa10.06□□□□□ -0.8
NEDD1-205ENST00000553609 TSPAN5P62079 268 aa10.06□□□□□ -0.8
NEDD1-205ENST00000553609 TNP2Q05952 138 aa10.06□□□□□ -0.8
NEDD1-205ENST00000553609 USF2Q15853 346 aaPredicted RBP10.06□□□□□ -0.8
NEDD1-205ENST00000553609 GDF5OSQ5U4N7 250 aa10.06□□□□□ -0.8
NEDD1-205ENST00000553609 SAMD12Q8N8I0 201 aa10.06□□□□□ -0.8
NEDD1-205ENST00000553609 TP53RKQ96S44 253 aa10.06□□□□□ -0.8
NEDD1-205ENST00000553609 NRN1Q9NPD7 142 aa10.06□□□□□ -0.8
NEDD1-205ENST00000553609 TMEM189A5PLL7 270 aa10.05□□□□□ -0.8
NEDD1-205ENST00000553609 SMIM9A6NGZ8 99 aa10.05□□□□□ -0.8
NEDD1-205ENST00000553609 HOXA1P49639 335 aaPredicted RBP10.05□□□□□ -0.8
NEDD1-205ENST00000553609 SUB1P53999 127 aaKnown RBP eCLIP10.05□□□□□ -0.8
NEDD1-205ENST00000553609 SNRPD3P62318 126 aaKnown RBP10.05□□□□□ -0.8
NEDD1-205ENST00000553609 AARDQ4LEZ3 155 aa10.05□□□□□ -0.8
NEDD1-205ENST00000553609 FAM222AQ5U5X8 452 aa10.05□□□□□ -0.8
NEDD1-205ENST00000553609 PRSS54Q6PEW0 395 aa10.05□□□□□ -0.8
NEDD1-205ENST00000553609 MAPKAPK5-AS1Q8N8E1 139 aa10.05□□□□□ -0.8
NEDD1-205ENST00000553609 ZNF709Q8N972 641 aa10.05□□□□□ -0.8
NEDD1-205ENST00000553609 TRAV30A0A087WSZ9 112 aa10.04□□□□□ -0.8
NEDD1-205ENST00000553609 C16orf90A8MZG2 172 aa10.04□□□□□ -0.8
NEDD1-205ENST00000553609 BUB3O43684 328 aa10.04□□□□□ -0.8
NEDD1-205ENST00000553609 PI3P19957 117 aa10.04□□□□□ -0.8
NEDD1-205ENST00000553609 RPS19P39019 145 aaKnown RBP10.04□□□□□ -0.8
NEDD1-205ENST00000553609 RND2P52198 227 aa10.04□□□□□ -0.8
NEDD1-205ENST00000553609 AKR1C2P52895 323 aa10.04□□□□□ -0.8
NEDD1-205ENST00000553609 YPEL3P61236 119 aaPredicted RBP10.04□□□□□ -0.8
NEDD1-205ENST00000553609 DHODHQ02127 395 aa10.04□□□□□ -0.8
NEDD1-205ENST00000553609 OXA1LQ15070 435 aa10.04□□□□□ -0.8
NEDD1-205ENST00000553609 LHFPL1Q86WI0 220 aa10.04□□□□□ -0.8
NEDD1-205ENST00000553609 CROCCP3Q8IVE0 287 aa10.04□□□□□ -0.8
NEDD1-205ENST00000553609 OR1S2Q8NGQ3 325 aa10.04□□□□□ -0.8
NEDD1-205ENST00000553609 TMEM170AQ8WVE7 144 aa10.04□□□□□ -0.8
NEDD1-205ENST00000553609 NIPSNAP3BQ9BS92 247 aa10.04□□□□□ -0.8
NEDD1-205ENST00000553609 RFNGQ9Y644 331 aa10.04□□□□□ -0.8
NEDD1-205ENST00000553609 SCGB2A1O75556 95 aa10.03□□□□□ -0.8
NEDD1-205ENST00000553609 NXPH3O95157 252 aa10.03□□□□□ -0.8
NEDD1-205ENST00000553609 NKX2-1P43699 371 aaPredicted RBP10.03□□□□□ -0.8
NEDD1-205ENST00000553609 FXYD7P58549 80 aa10.03□□□□□ -0.8
NEDD1-205ENST00000553609 TMEM88Q6PEY1 159 aa10.03□□□□□ -0.8
NEDD1-205ENST00000553609 SIGLEC15Q6ZMC9 328 aa10.03□□□□□ -0.8
NEDD1-205ENST00000553609 Q8WTZ3 238 aa10.03□□□□□ -0.8
NEDD1-205ENST00000553609 IGHV3OR16-12A0A075B7B8 117 aa10.02□□□□□ -0.81
NEDD1-205ENST00000553609 TEX48A0A1B0GUV7 120 aa10.02□□□□□ -0.81
NEDD1-205ENST00000553609 M0QYG6 137 aa10.02□□□□□ -0.81
NEDD1-205ENST00000553609 IL4P05112 153 aa10.02□□□□□ -0.81
NEDD1-205ENST00000553609 OR10J1P30954 320 aa10.02□□□□□ -0.81
NEDD1-205ENST00000553609 RCVRNP35243 200 aa10.02□□□□□ -0.81
NEDD1-205ENST00000553609 PIGPP57054 158 aa10.02□□□□□ -0.81
NEDD1-205ENST00000553609 ZNF486Q96H40 463 aaPredicted RBP10.02□□□□□ -0.81
NEDD1-205ENST00000553609 CLUHP3Q96NS8 147 aa10.02□□□□□ -0.81
NEDD1-205ENST00000553609 PDCD10Q9BUL8 212 aa10.02□□□□□ -0.81
NEDD1-205ENST00000553609 YTHDF1Q9BYJ9 559 aaKnown RBP10.02□□□□□ -0.81
NEDD1-205ENST00000553609 SCPEP1Q9HB40 452 aa10.02□□□□□ -0.81
NEDD1-205ENST00000553609 RPS10-NUDT3A0A1W2PQS6 291 aa10.01□□□□□ -0.81
NEDD1-205ENST00000553609 IGKV3-20P01619 116 aa10.01□□□□□ -0.81
NEDD1-205ENST00000553609 SLC25A4P12235 298 aa10.01□□□□□ -0.81
NEDD1-205ENST00000553609 HTN3P15516 51 aa10.01□□□□□ -0.81
NEDD1-205ENST00000553609 UCP1P25874 307 aa10.01□□□□□ -0.81
NEDD1-205ENST00000553609 NEDD8Q15843 81 aa10.01□□□□□ -0.81
NEDD1-205ENST00000553609 SP6Q3SY56 376 aa10.01□□□□□ -0.81
NEDD1-205ENST00000553609 C2orf83Q53S99 150 aa10.01□□□□□ -0.81
NEDD1-205ENST00000553609 C1orf158Q8N1D5 194 aa10.01□□□□□ -0.81
NEDD1-205ENST00000553609 Q8N1X5 172 aa10.01□□□□□ -0.81
NEDD1-205ENST00000553609 WDR12Q9GZL7 423 aaKnown RBP10.01□□□□□ -0.81
NEDD1-205ENST00000553609 SAV1Q9H4B6 383 aaPredicted RBP10.01□□□□□ -0.81
NEDD1-205ENST00000553609 ENY2Q9NPA8 101 aa10.01□□□□□ -0.81
NEDD1-205ENST00000553609 C3orf85A0A1B0GTC6 90 aa10□□□□□ -0.81
NEDD1-205ENST00000553609 SOCS3O14543 225 aa10□□□□□ -0.81
NEDD1-205ENST00000553609 TOMM40O96008 361 aa10□□□□□ -0.81
NEDD1-205ENST00000553609 PGAM2P15259 253 aa10□□□□□ -0.81
NEDD1-205ENST00000553609 HTR2BP41595 481 aa10□□□□□ -0.81
NEDD1-205ENST00000553609 FAM3BP58499 235 aaPredicted RBP10□□□□□ -0.81
NEDD1-205ENST00000553609 SPCS3P61009 180 aa10□□□□□ -0.81
NEDD1-205ENST00000553609 ZNF79Q15937 498 aa10□□□□□ -0.81
NEDD1-205ENST00000553609 FOXI2Q6ZQN5 318 aa10□□□□□ -0.81
NEDD1-205ENST00000553609 SNX29P2Q8IUI4 249 aa10□□□□□ -0.81
NEDD1-205ENST00000553609 RNASEH2CQ8TDP1 164 aaKnown RBP10□□□□□ -0.81
NEDD1-205ENST00000553609 SLC35B3Q9H1N7 401 aa10□□□□□ -0.81
NEDD1-205ENST00000553609 YTHDF2Q9Y5A9 579 aaKnown RBP10□□□□□ -0.81
NEDD1-205ENST00000553609 LOC102723971A0A1B0GUV8 181 aa9.99□□□□□ -0.81
NEDD1-205ENST00000553609 GSTZ1O43708 216 aaPredicted RBP9.99□□□□□ -0.81
NEDD1-205ENST00000553609 ATG12O94817 140 aa9.99□□□□□ -0.81
NEDD1-205ENST00000553609 TRIM16LQ309B1 348 aa9.99□□□□□ -0.81
NEDD1-205ENST00000553609 OR52E5Q8NH55 327 aa9.99□□□□□ -0.81
NEDD1-205ENST00000553609 LHFPL5Q8TAF8 219 aa9.99□□□□□ -0.81
NEDD1-205ENST00000553609 NPIPB3Q92617 1050 aa9.99□□□□□ -0.81
NEDD1-205ENST00000553609 FAT1Q14517 4588 aa9.99□□□□□ -0.81
NEDD1-205ENST00000553609 NBDYA0A0U1RRE5 68 aa9.98□□□□□ -0.81
NEDD1-205ENST00000553609 APOA1P02647 267 aa9.98□□□□□ -0.81
NEDD1-205ENST00000553609 RD3LP0DJH9 198 aa9.98□□□□□ -0.81
NEDD1-205ENST00000553609 PSG1P11464 419 aa9.98□□□□□ -0.81
NEDD1-205ENST00000553609 PAX9P55771 341 aa9.98□□□□□ -0.81
NEDD1-205ENST00000553609 GSG1LQ6UXU4 331 aa9.98□□□□□ -0.81
NEDD1-205ENST00000553609 SLC24A4Q8NFF2 622 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms