RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 IGKV1-17P01599 117 aa9.53□□□□□ -0.88
PRPF39-204ENST00000553605 GNAO1P09471 354 aa9.53□□□□□ -0.88
PRPF39-204ENST00000553605 SNCAP37840 140 aa9.53□□□□□ -0.88
PRPF39-204ENST00000553605 FCN2Q15485 313 aa9.53□□□□□ -0.88
PRPF39-204ENST00000553605 MLANAQ16655 118 aa9.53□□□□□ -0.88
PRPF39-204ENST00000553605 TIGITQ495A1 244 aa9.53□□□□□ -0.88
PRPF39-204ENST00000553605 TMEM69Q5SWH9 247 aa9.53□□□□□ -0.88
PRPF39-204ENST00000553605 SIGLEC15Q6ZMC9 328 aa9.53□□□□□ -0.88
PRPF39-204ENST00000553605 C10orf67Q8IYJ2 551 aa9.53□□□□□ -0.88
PRPF39-204ENST00000553605 OR4X1Q8NH49 305 aa9.53□□□□□ -0.88
PRPF39-204ENST00000553605 LINC00052Q96N35 136 aa9.53□□□□□ -0.88
PRPF39-204ENST00000553605 S100A14Q9HCY8 104 aa9.53□□□□□ -0.88
PRPF39-204ENST00000553605 ACOT13Q9NPJ3 140 aa9.53□□□□□ -0.88
PRPF39-204ENST00000553605 DAPK2Q9UIK4 370 aa9.53□□□□□ -0.88
PRPF39-204ENST00000553605 TRAV1-2A0A0B4J238 106 aa9.52□□□□□ -0.89
PRPF39-204ENST00000553605 CORTO00230 105 aa9.52□□□□□ -0.89
PRPF39-204ENST00000553605 PRM2P04554 102 aa9.52□□□□□ -0.89
PRPF39-204ENST00000553605 ZNF79Q15937 498 aa9.52□□□□□ -0.89
PRPF39-204ENST00000553605 SPINK9Q5DT21 86 aa9.52□□□□□ -0.89
PRPF39-204ENST00000553605 RNASE12Q5GAN4 147 aaKnown RBP9.52□□□□□ -0.89
PRPF39-204ENST00000553605 HOGA1Q86XE5 327 aa9.52□□□□□ -0.89
PRPF39-204ENST00000553605 Q8WTZ3 238 aa9.52□□□□□ -0.89
PRPF39-204ENST00000553605 SCPEP1Q9HB40 452 aa9.52□□□□□ -0.89
PRPF39-204ENST00000553605 TRAV30A0A087WSZ9 112 aa9.51□□□□□ -0.89
PRPF39-204ENST00000553605 ZNF705GA8MUZ8 300 aaPredicted RBP9.51□□□□□ -0.89
PRPF39-204ENST00000553605 BUB3O43684 328 aa9.51□□□□□ -0.89
PRPF39-204ENST00000553605 SCGNO76038 276 aa9.51□□□□□ -0.89
PRPF39-204ENST00000553605 RAB3BP20337 219 aa9.51□□□□□ -0.89
PRPF39-204ENST00000553605 GCSHP23434 173 aa9.51□□□□□ -0.89
PRPF39-204ENST00000553605 RORCP51449 518 aa9.51□□□□□ -0.89
PRPF39-204ENST00000553605 HERV-K104P61576 105 aa9.51□□□□□ -0.89
PRPF39-204ENST00000553605 ESRGQ1W209 222 aa9.51□□□□□ -0.89
PRPF39-204ENST00000553605 SPATA31B1PQ5VZV4 182 aa9.51□□□□□ -0.89
PRPF39-204ENST00000553605 H2BFWTQ7Z2G1 175 aa9.51□□□□□ -0.89
PRPF39-204ENST00000553605 OR4C16Q8NGL9 310 aa9.51□□□□□ -0.89
PRPF39-204ENST00000553605 FNDC4Q9H6D8 234 aaPredicted RBP9.51□□□□□ -0.89
PRPF39-204ENST00000553605 FCER2P06734 321 aa9.5□□□□□ -0.89
PRPF39-204ENST00000553605 ID1P41134 155 aa9.5□□□□□ -0.89
PRPF39-204ENST00000553605 OPRK1P41145 380 aa9.5□□□□□ -0.89
PRPF39-204ENST00000553605 SUB1P53999 127 aaKnown RBP eCLIP9.5□□□□□ -0.89
PRPF39-204ENST00000553605 FAM78BQ5VT40 261 aa9.5□□□□□ -0.89
PRPF39-204ENST00000553605 SEC22AQ96IW7 307 aa9.5□□□□□ -0.89
PRPF39-204ENST00000553605 IGF2BP2-AS1Q96M15 143 aa9.5□□□□□ -0.89
PRPF39-204ENST00000553605 MRPS16Q9Y3D3 137 aaKnown RBP9.5□□□□□ -0.89
PRPF39-204ENST00000553605 MYL9P24844 172 aa9.49□□□□□ -0.89
PRPF39-204ENST00000553605 DHODHQ02127 395 aa9.49□□□□□ -0.89
PRPF39-204ENST00000553605 MLLT11Q13015 90 aaPredicted RBP9.49□□□□□ -0.89
PRPF39-204ENST00000553605 EBLN2Q6P2I7 272 aa9.49□□□□□ -0.89
PRPF39-204ENST00000553605 CMTM1Q8IZ96 169 aa9.49□□□□□ -0.89
PRPF39-204ENST00000553605 OR5AP2Q8NGF4 316 aa9.49□□□□□ -0.89
PRPF39-204ENST00000553605 FCGR1BQ92637 280 aa9.49□□□□□ -0.89
PRPF39-204ENST00000553605 GNPNAT1Q96EK6 184 aaPredicted RBP9.49□□□□□ -0.89
PRPF39-204ENST00000553605 A0A087WTM6 91 aa9.48□□□□□ -0.89
PRPF39-204ENST00000553605 F6UB75 175 aa9.48□□□□□ -0.89
PRPF39-204ENST00000553605 EBAG9O00559 213 aa9.48□□□□□ -0.89
PRPF39-204ENST00000553605 IL4P05112 153 aa9.48□□□□□ -0.89
PRPF39-204ENST00000553605 DNAH10OSP0CZ25 163 aa9.48□□□□□ -0.89
PRPF39-204ENST00000553605 RNASE2P10153 161 aaKnown RBP9.48□□□□□ -0.89
PRPF39-204ENST00000553605 TSPOP30536 169 aa9.48□□□□□ -0.89
PRPF39-204ENST00000553605 RPL5P46777 297 aaKnown RBP9.48□□□□□ -0.89
PRPF39-204ENST00000553605 PAX9P55771 341 aa9.48□□□□□ -0.89
PRPF39-204ENST00000553605 OR5I1Q13606 314 aa9.48□□□□□ -0.89
PRPF39-204ENST00000553605 COQ8AQ8NI60 647 aa9.48□□□□□ -0.89
PRPF39-204ENST00000553605 RXFP4Q8TDU9 374 aa9.48□□□□□ -0.89
PRPF39-204ENST00000553605 ABHD1Q96SE0 405 aa9.48□□□□□ -0.89
PRPF39-204ENST00000553605 WDR12Q9GZL7 423 aaKnown RBP9.48□□□□□ -0.89
PRPF39-204ENST00000553605 KLK11Q9UBX7 282 aa9.48□□□□□ -0.89
PRPF39-204ENST00000553605 TRAV26-1A0A087WT03 109 aa9.47□□□□□ -0.89
PRPF39-204ENST00000553605 PLAC8L1A1L4L8 177 aa9.47□□□□□ -0.89
PRPF39-204ENST00000553605 INS-IGF2F8WCM5 200 aa9.47□□□□□ -0.89
PRPF39-204ENST00000553605 GSTZ1O43708 216 aaPredicted RBP9.47□□□□□ -0.89
PRPF39-204ENST00000553605 IGLC1P0CG04 106 aa9.47□□□□□ -0.89
PRPF39-204ENST00000553605 AZU1P20160 251 aa9.47□□□□□ -0.89
PRPF39-204ENST00000553605 PSMB3P49720 205 aa9.47□□□□□ -0.89
PRPF39-204ENST00000553605 YPEL3P61236 119 aaPredicted RBP9.47□□□□□ -0.89
PRPF39-204ENST00000553605 DHRS11Q6UWP2 260 aa9.47□□□□□ -0.89
PRPF39-204ENST00000553605 SLC35G3Q8N808 338 aa9.47□□□□□ -0.89
PRPF39-204ENST00000553605 OR1S2Q8NGQ3 325 aa9.47□□□□□ -0.89
PRPF39-204ENST00000553605 OR6F1Q8NGZ6 308 aa9.47□□□□□ -0.89
PRPF39-204ENST00000553605 DEFB104AQ8WTQ1 72 aa9.47□□□□□ -0.89
PRPF39-204ENST00000553605 A0A0J9YX75 114 aa9.46□□□□□ -0.9
PRPF39-204ENST00000553605 SMIM30A4D0T7 59 aa9.46□□□□□ -0.9
PRPF39-204ENST00000553605 GPR31O00270 319 aa9.46□□□□□ -0.9
PRPF39-204ENST00000553605 IGKV1-39P01597 117 aa9.46□□□□□ -0.9
PRPF39-204ENST00000553605 PLA2G1BP04054 148 aaKnown RBP9.46□□□□□ -0.9
PRPF39-204ENST00000553605 IGKV1D-39P04432 117 aa9.46□□□□□ -0.9
PRPF39-204ENST00000553605 B2MP61769 119 aa9.46□□□□□ -0.9
PRPF39-204ENST00000553605 MGLLQ99685 303 aa9.46□□□□□ -0.9
PRPF39-204ENST00000553605 ZNF2Q9BSG1 426 aaPredicted RBP9.46□□□□□ -0.9
PRPF39-204ENST00000553605 FAM212BQ9NTI7 297 aaPredicted RBP9.46□□□□□ -0.9
PRPF39-204ENST00000553605 SCN3BQ9NY72 215 aa9.46□□□□□ -0.9
PRPF39-204ENST00000553605 EHFQ9NZC4 300 aa9.46□□□□□ -0.9
PRPF39-204ENST00000553605 TNFRSF18Q9Y5U5 241 aa9.46□□□□□ -0.9
PRPF39-204ENST00000553605 TRAV18A0A075B6X5 111 aa9.45□□□□□ -0.9
PRPF39-204ENST00000553605 A0A0J9YY99 117 aa9.45□□□□□ -0.9
PRPF39-204ENST00000553605 M6PRP20645 277 aa9.45□□□□□ -0.9
PRPF39-204ENST00000553605 OR10J1P30954 320 aa9.45□□□□□ -0.9
PRPF39-204ENST00000553605 IZUMO4Q1ZYL8 232 aa9.45□□□□□ -0.9
PRPF39-204ENST00000553605 PACRGLQ8N7B6 248 aa9.45□□□□□ -0.9
PRPF39-204ENST00000553605 MRGPRFQ96AM1 343 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms