RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 DLX1P56177 255 aa4.78□□□□□ -1.64
VIPAS39-204ENST00000553576 GNB1P62873 340 aa4.78□□□□□ -1.64
VIPAS39-204ENST00000553576 TNXAQ16473 311 aa4.78□□□□□ -1.64
VIPAS39-204ENST00000553576 KLK9Q2XQG4 91 aa4.78□□□□□ -1.64
VIPAS39-204ENST00000553576 SMUG1Q53HV7 270 aa4.78□□□□□ -1.64
VIPAS39-204ENST00000553576 PATE2Q6UY27 113 aa4.78□□□□□ -1.64
VIPAS39-204ENST00000553576 VMO1Q7Z5L0 202 aa4.78□□□□□ -1.64
VIPAS39-204ENST00000553576 OR51G1Q8NGK1 321 aa4.78□□□□□ -1.64
VIPAS39-204ENST00000553576 OR2T10Q8NGZ9 312 aa4.78□□□□□ -1.64
VIPAS39-204ENST00000553576 OR4X1Q8NH49 305 aa4.78□□□□□ -1.64
VIPAS39-204ENST00000553576 OR2T6Q8NHC8 308 aa4.78□□□□□ -1.64
VIPAS39-204ENST00000553576 Q8WTZ3 238 aa4.78□□□□□ -1.64
VIPAS39-204ENST00000553576 SRSF12Q8WXF0 261 aaKnown RBP4.78□□□□□ -1.64
VIPAS39-204ENST00000553576 RPUSD4Q96CM3 377 aaKnown RBP4.78□□□□□ -1.64
VIPAS39-204ENST00000553576 ZNF503Q96F45 646 aa4.78□□□□□ -1.64
VIPAS39-204ENST00000553576 FAM167A-AS1Q96KT0 104 aa4.78□□□□□ -1.64
VIPAS39-204ENST00000553576 UHRF2Q96PU4 802 aa4.78□□□□□ -1.64
VIPAS39-204ENST00000553576 FBXL15Q9H469 300 aa4.78□□□□□ -1.64
VIPAS39-204ENST00000553576 KLK9Q9UKQ9 250 aa4.78□□□□□ -1.64
VIPAS39-204ENST00000553576 HRNRQ86YZ3 2850 aaPredicted RBP4.78□□□□□ -1.64
VIPAS39-204ENST00000553576 ABCA1O95477 2261 aa4.77□□□□□ -1.65
VIPAS39-204ENST00000553576 PIEZO1Q92508 2521 aa4.77□□□□□ -1.65
VIPAS39-204ENST00000553576 IGHV2-70DA0A0C4DH43 119 aa4.77□□□□□ -1.65
VIPAS39-204ENST00000553576 I3L2K1 104 aa4.77□□□□□ -1.65
VIPAS39-204ENST00000553576 NDUFS7O75251 213 aa4.77□□□□□ -1.65
VIPAS39-204ENST00000553576 NDUFB4O95168 129 aa4.77□□□□□ -1.65
VIPAS39-204ENST00000553576 CXCL1P09341 107 aa4.77□□□□□ -1.65
VIPAS39-204ENST00000553576 PAX1P15863 534 aa4.77□□□□□ -1.65
VIPAS39-204ENST00000553576 ATP5G3P48201 142 aa4.77□□□□□ -1.65
VIPAS39-204ENST00000553576 PDLIM4P50479 330 aa4.77□□□□□ -1.65
VIPAS39-204ENST00000553576 PAX8Q06710 450 aa4.77□□□□□ -1.65
VIPAS39-204ENST00000553576 FOXL1Q12952 345 aa4.77□□□□□ -1.65
VIPAS39-204ENST00000553576 C5orf64Q2M2E5 130 aa4.77□□□□□ -1.65
VIPAS39-204ENST00000553576 C10orf55Q5SWW7 151 aa4.77□□□□□ -1.65
VIPAS39-204ENST00000553576 SPATA31B1PQ5VZV4 182 aa4.77□□□□□ -1.65
VIPAS39-204ENST00000553576 CST9LP1Q5W188 147 aa4.77□□□□□ -1.65
VIPAS39-204ENST00000553576 ZNF562Q6V9R5 426 aa4.77□□□□□ -1.65
VIPAS39-204ENST00000553576 MIR17HGQ75NE6 70 aa4.77□□□□□ -1.65
VIPAS39-204ENST00000553576 LINC01551Q86U37 167 aa4.77□□□□□ -1.65
VIPAS39-204ENST00000553576 STXBP6Q8NFX7 210 aa4.77□□□□□ -1.65
VIPAS39-204ENST00000553576 TMEM190Q8WZ59 177 aa4.77□□□□□ -1.65
VIPAS39-204ENST00000553576 AJUBAQ96IF1 538 aa4.77□□□□□ -1.65
VIPAS39-204ENST00000553576 BTF3L4Q96K17 158 aa4.77□□□□□ -1.65
VIPAS39-204ENST00000553576 ZNF48Q96MX3 618 aaPredicted RBP4.77□□□□□ -1.65
VIPAS39-204ENST00000553576 TCEAL7Q9BRU2 100 aa4.77□□□□□ -1.65
VIPAS39-204ENST00000553576 UBTD1Q9HAC8 227 aa4.77□□□□□ -1.65
VIPAS39-204ENST00000553576 LPAR2Q9HBW0 351 aa4.77□□□□□ -1.65
VIPAS39-204ENST00000553576 MRPL36Q9P0J6 103 aaKnown RBP4.77□□□□□ -1.65
VIPAS39-204ENST00000553576 YTHDF2Q9Y5A9 579 aaKnown RBP4.77□□□□□ -1.65
VIPAS39-204ENST00000553576 NCOR2Q9Y618 2525 aa4.77□□□□□ -1.65
VIPAS39-204ENST00000553576 NPIPB5A8MRT5 1133 aa4.76□□□□□ -1.65
VIPAS39-204ENST00000553576 VWC2LB2RUY7 222 aa4.76□□□□□ -1.65
VIPAS39-204ENST00000553576 AP4M1O00189 453 aa4.76□□□□□ -1.65
VIPAS39-204ENST00000553576 NDUFS8O00217 210 aa4.76□□□□□ -1.65
VIPAS39-204ENST00000553576 UBE2CO00762 179 aa4.76□□□□□ -1.65
VIPAS39-204ENST00000553576 PHOX2AO14813 284 aa4.76□□□□□ -1.65
VIPAS39-204ENST00000553576 GGCTO75223 188 aaKnown RBP4.76□□□□□ -1.65
VIPAS39-204ENST00000553576 TYMSP04818 313 aa4.76□□□□□ -1.65
VIPAS39-204ENST00000553576 GATA2P23769 480 aaPredicted RBP4.76□□□□□ -1.65
VIPAS39-204ENST00000553576 SRP14P37108 136 aaKnown RBP4.76□□□□□ -1.65
VIPAS39-204ENST00000553576 MYCNOSP40205 109 aa4.76□□□□□ -1.65
VIPAS39-204ENST00000553576 LGALS4P56470 323 aa4.76□□□□□ -1.65
VIPAS39-204ENST00000553576 BPIFB3P59826 476 aa4.76□□□□□ -1.65
VIPAS39-204ENST00000553576 UBE2G2P60604 165 aa4.76□□□□□ -1.65
VIPAS39-204ENST00000553576 LCN2P80188 198 aa4.76□□□□□ -1.65
VIPAS39-204ENST00000553576 MMDQ15546 238 aa4.76□□□□□ -1.65
VIPAS39-204ENST00000553576 ADIRFQ15847 76 aa4.76□□□□□ -1.65
VIPAS39-204ENST00000553576 ZNF674Q2M3X9 581 aa4.76□□□□□ -1.65
VIPAS39-204ENST00000553576 C10orf113Q5VZT2 155 aa4.76□□□□□ -1.65
VIPAS39-204ENST00000553576 ZNF343Q6P1L6 599 aa4.76□□□□□ -1.65
VIPAS39-204ENST00000553576 C16orf82Q7Z2V1 217 aa4.76□□□□□ -1.65
VIPAS39-204ENST00000553576 LHFPL4Q7Z7J7 247 aa4.76□□□□□ -1.65
VIPAS39-204ENST00000553576 IQCF2Q8IXL9 164 aa4.76□□□□□ -1.65
VIPAS39-204ENST00000553576 DYNAPQ8N1N2 210 aa4.76□□□□□ -1.65
VIPAS39-204ENST00000553576 TTC9CQ8N5M4 171 aa4.76□□□□□ -1.65
VIPAS39-204ENST00000553576 OCC1Q8TAD7 63 aa4.76□□□□□ -1.65
VIPAS39-204ENST00000553576 C22orf15Q8WYQ4 148 aa4.76□□□□□ -1.65
VIPAS39-204ENST00000553576 FAM122AQ96E09 287 aa4.76□□□□□ -1.65
VIPAS39-204ENST00000553576 ACY3Q96HD9 319 aa4.76□□□□□ -1.65
VIPAS39-204ENST00000553576 FAM210BQ96KR6 192 aa4.76□□□□□ -1.65
VIPAS39-204ENST00000553576 TBX15Q96SF7 602 aa4.76□□□□□ -1.65
VIPAS39-204ENST00000553576 SLC25A2Q9BXI2 301 aa4.76□□□□□ -1.65
VIPAS39-204ENST00000553576 SRD5A3Q9H8P0 318 aa4.76□□□□□ -1.65
VIPAS39-204ENST00000553576 TNFRSF19Q9NS68 423 aa4.76□□□□□ -1.65
VIPAS39-204ENST00000553576 C1RLQ9NZP8 487 aa4.76□□□□□ -1.65
VIPAS39-204ENST00000553576 HILPDAQ9Y5L2 63 aa4.76□□□□□ -1.65
VIPAS39-204ENST00000553576 DMRT1Q9Y5R6 373 aa4.76□□□□□ -1.65
VIPAS39-204ENST00000553576 MED13LQ71F56 2210 aa4.75□□□□□ -1.65
VIPAS39-204ENST00000553576 TRBV20OR9-2A0A075B6H5 130 aa4.75□□□□□ -1.65
VIPAS39-204ENST00000553576 TRAV9-1A0A075B6T8 112 aa4.75□□□□□ -1.65
VIPAS39-204ENST00000553576 TRAV30A0A087WSZ9 112 aa4.75□□□□□ -1.65
VIPAS39-204ENST00000553576 TGIF2-C20orf24A0A0A6YYL0 155 aa4.75□□□□□ -1.65
VIPAS39-204ENST00000553576 HELTA6NFD8 242 aa4.75□□□□□ -1.65
VIPAS39-204ENST00000553576 H7BYZ3 331 aa4.75□□□□□ -1.65
VIPAS39-204ENST00000553576 COX7A2P2O60397 106 aa4.75□□□□□ -1.65
VIPAS39-204ENST00000553576 HYPMO75409 117 aa4.75□□□□□ -1.65
VIPAS39-204ENST00000553576 TOX4O94842 621 aa4.75□□□□□ -1.65
VIPAS39-204ENST00000553576 CNIH1O95406 144 aa4.75□□□□□ -1.65
VIPAS39-204ENST00000553576 IGHV4-39P01824 125 aa4.75□□□□□ -1.65
VIPAS39-204ENST00000553576 REG1AP05451 166 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms