RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 IGLC1P0CG04 106 aa13.73□□□□□ -0.21
PSEN1-206ENST00000553447 GATA2P23769 480 aaPredicted RBP13.73□□□□□ -0.21
PSEN1-206ENST00000553447 NPBWR1P48145 328 aa13.73□□□□□ -0.21
PSEN1-206ENST00000553447 CFHR3Q02985 330 aa13.73□□□□□ -0.21
PSEN1-206ENST00000553447 ZNF90Q03938 601 aa13.73□□□□□ -0.21
PSEN1-206ENST00000553447 TMEM95Q3KNT9 176 aa13.73□□□□□ -0.21
PSEN1-206ENST00000553447 GCSAMLQ5JQS6 135 aa13.73□□□□□ -0.21
PSEN1-206ENST00000553447 FAM122CQ6P4D5 195 aa13.73□□□□□ -0.21
PSEN1-206ENST00000553447 RPP25LQ8N5L8 163 aaKnown RBP13.73□□□□□ -0.21
PSEN1-206ENST00000553447 MS4A10Q96PG2 267 aa13.73□□□□□ -0.21
PSEN1-206ENST00000553447 ACTR3CQ9C0K3 210 aaPredicted RBP13.73□□□□□ -0.21
PSEN1-206ENST00000553447 ANK3Q12955 4377 aaKnown RBP13.72□□□□□ -0.21
PSEN1-206ENST00000553447 F8W735 103 aaPredicted RBP13.72□□□□□ -0.21
PSEN1-206ENST00000553447 C15orf32Q32M92 178 aa13.72□□□□□ -0.21
PSEN1-206ENST00000553447 TIGITQ495A1 244 aa13.72□□□□□ -0.21
PSEN1-206ENST00000553447 SSX7Q7RTT5 188 aa13.72□□□□□ -0.21
PSEN1-206ENST00000553447 MBD3L1Q8WWY6 194 aa13.72□□□□□ -0.21
PSEN1-206ENST00000553447 TXN2Q99757 166 aa13.72□□□□□ -0.21
PSEN1-206ENST00000553447 SLC25A22Q9H936 323 aa13.72□□□□□ -0.21
PSEN1-206ENST00000553447 ESM1Q9NQ30 184 aa13.72□□□□□ -0.21
PSEN1-206ENST00000553447 TLN2Q9Y4G6 2542 aa13.72□□□□□ -0.21
PSEN1-206ENST00000553447 TRAV30A0A087WSZ9 112 aa13.71□□□□□ -0.21
PSEN1-206ENST00000553447 CTXND1A0A1B0GTU2 59 aa13.71□□□□□ -0.21
PSEN1-206ENST00000553447 FAM223BA6NKX1 122 aa13.71□□□□□ -0.21
PSEN1-206ENST00000553447 NUDT19A8MXV4 375 aa13.71□□□□□ -0.21
PSEN1-206ENST00000553447 SEC14L6B5MCN3 397 aa13.71□□□□□ -0.21
PSEN1-206ENST00000553447 CLDN34H7C241 214 aa13.71□□□□□ -0.21
PSEN1-206ENST00000553447 GNG7O60262 68 aa13.71□□□□□ -0.21
PSEN1-206ENST00000553447 ATP6V1G1O75348 118 aa13.71□□□□□ -0.21
PSEN1-206ENST00000553447 IGLV1-40P01703 118 aa13.71□□□□□ -0.21
PSEN1-206ENST00000553447 HBE1P02100 147 aa13.71□□□□□ -0.21
PSEN1-206ENST00000553447 TRGV3P03979 118 aa13.71□□□□□ -0.21
PSEN1-206ENST00000553447 FCGR2BP31994 310 aaPredicted RBP13.71□□□□□ -0.21
PSEN1-206ENST00000553447 CDC34P49427 236 aaPredicted RBP13.71□□□□□ -0.21
PSEN1-206ENST00000553447 Q56UQ5 140 aa13.71□□□□□ -0.21
PSEN1-206ENST00000553447 SPSB3Q6PJ21 355 aa13.71□□□□□ -0.21
PSEN1-206ENST00000553447 FAM223AQ8IWN6 122 aa13.71□□□□□ -0.21
PSEN1-206ENST00000553447 Q8N2B8 174 aa13.71□□□□□ -0.21
PSEN1-206ENST00000553447 SFT2D1Q8WV19 159 aa13.71□□□□□ -0.21
PSEN1-206ENST00000553447 TRAV1-1A0A0B4J248 108 aa13.7□□□□□ -0.22
PSEN1-206ENST00000553447 A0A1B0GV50 99 aa13.7□□□□□ -0.22
PSEN1-206ENST00000553447 IGKV1-17P01599 117 aa13.7□□□□□ -0.22
PSEN1-206ENST00000553447 IGHV3-23P01764 117 aa13.7□□□□□ -0.22
PSEN1-206ENST00000553447 LCN15Q6UWW0 184 aa13.7□□□□□ -0.22
PSEN1-206ENST00000553447 IL34Q6ZMJ4 242 aa13.7□□□□□ -0.22
PSEN1-206ENST00000553447 ZNF502Q8TBZ5 544 aa13.7□□□□□ -0.22
PSEN1-206ENST00000553447 RAB24Q969Q5 203 aa13.7□□□□□ -0.22
PSEN1-206ENST00000553447 MARC2Q969Z3 335 aa13.7□□□□□ -0.22
PSEN1-206ENST00000553447 EEF1AKMT3Q96AZ1 226 aa13.7□□□□□ -0.22
PSEN1-206ENST00000553447 A0A1W2PPV4 95 aa13.69□□□□□ -0.22
PSEN1-206ENST00000553447 MAP1LC3B2A6NCE7 125 aa13.69□□□□□ -0.22
PSEN1-206ENST00000553447 EIF3GO75821 320 aaKnown RBP eCLIP13.69□□□□□ -0.22
PSEN1-206ENST00000553447 FABP1P07148 127 aa13.69□□□□□ -0.22
PSEN1-206ENST00000553447 TPPP2P59282 170 aa13.69□□□□□ -0.22
PSEN1-206ENST00000553447 RHOBP62745 196 aa13.69□□□□□ -0.22
PSEN1-206ENST00000553447 ATP5G2Q06055 141 aa13.69□□□□□ -0.22
PSEN1-206ENST00000553447 Q71RC1 249 aaPredicted RBP13.69□□□□□ -0.22
PSEN1-206ENST00000553447 COMMD1Q8N668 190 aa13.69□□□□□ -0.22
PSEN1-206ENST00000553447 ZNF418Q8TF45 676 aaPredicted RBP13.69□□□□□ -0.22
PSEN1-206ENST00000553447 MAP1LC3BQ9GZQ8 125 aa13.69□□□□□ -0.22
PSEN1-206ENST00000553447 SONP18583 2426 aaKnown RBP13.69□□□□□ -0.22
PSEN1-206ENST00000553447 TRBV7-1A0A0A6YYK4 115 aa13.68□□□□□ -0.22
PSEN1-206ENST00000553447 PSMB11A5LHX3 300 aa13.68□□□□□ -0.22
PSEN1-206ENST00000553447 SCGB2A1O75556 95 aa13.68□□□□□ -0.22
PSEN1-206ENST00000553447 PF4V1P10720 104 aa13.68□□□□□ -0.22
PSEN1-206ENST00000553447 CCL20P78556 96 aa13.68□□□□□ -0.22
PSEN1-206ENST00000553447 OR1L4Q8NGR5 311 aa13.68□□□□□ -0.22
PSEN1-206ENST00000553447 CITED4Q96RK1 184 aa13.68□□□□□ -0.22
PSEN1-206ENST00000553447 C19orf24Q9BVV8 132 aa13.68□□□□□ -0.22
PSEN1-206ENST00000553447 GAR1Q9NY12 217 aaKnown RBP13.68□□□□□ -0.22
PSEN1-206ENST00000553447 NOTCH2Q04721 2471 aa13.67□□□□□ -0.22
PSEN1-206ENST00000553447 TMEM89A2RUT3 159 aa13.67□□□□□ -0.22
PSEN1-206ENST00000553447 RAB19A4D1S5 217 aa13.67□□□□□ -0.22
PSEN1-206ENST00000553447 FAM181BA6NEQ2 426 aa13.67□□□□□ -0.22
PSEN1-206ENST00000553447 OR2T8A6NH00 312 aa13.67□□□□□ -0.22
PSEN1-206ENST00000553447 INAFM1C9JVW0 142 aa13.67□□□□□ -0.22
PSEN1-206ENST00000553447 HMGB3O15347 200 aaKnown RBP13.67□□□□□ -0.22
PSEN1-206ENST00000553447 TOMM40O96008 361 aa13.67□□□□□ -0.22
PSEN1-206ENST00000553447 IGHG4P01861 327 aa13.67□□□□□ -0.22
PSEN1-206ENST00000553447 RNASE1P07998 156 aaKnown RBP13.67□□□□□ -0.22
PSEN1-206ENST00000553447 OR5G3P0C626 314 aa13.67□□□□□ -0.22
PSEN1-206ENST00000553447 PSG1P11464 419 aa13.67□□□□□ -0.22
PSEN1-206ENST00000553447 FGF8P55075 233 aaPredicted RBP13.67□□□□□ -0.22
PSEN1-206ENST00000553447 HILS1P60008 231 aa13.67□□□□□ -0.22
PSEN1-206ENST00000553447 PLP1P60201 277 aa13.67□□□□□ -0.22
PSEN1-206ENST00000553447 YPEL3P61236 119 aaPredicted RBP13.67□□□□□ -0.22
PSEN1-206ENST00000553447 EIF4E3Q8N5X7 224 aaKnown RBP13.67□□□□□ -0.22
PSEN1-206ENST00000553447 GATAD1Q8WUU5 269 aa13.67□□□□□ -0.22
PSEN1-206ENST00000553447 TMEM37Q8WXS4 190 aa13.67□□□□□ -0.22
PSEN1-206ENST00000553447 USMG5Q96IX5 58 aa13.67□□□□□ -0.22
PSEN1-206ENST00000553447 CCDC140Q96MF4 163 aa13.67□□□□□ -0.22
PSEN1-206ENST00000553447 PFDN5Q99471 154 aa13.67□□□□□ -0.22
PSEN1-206ENST00000553447 DNAJC4Q9NNZ3 241 aa13.67□□□□□ -0.22
PSEN1-206ENST00000553447 OTOGQ6ZRI0 2925 aa13.67□□□□□ -0.22
PSEN1-206ENST00000553447 COX7A2P2O60397 106 aa13.66□□□□□ -0.22
PSEN1-206ENST00000553447 RD3LP0DJH9 198 aa13.66□□□□□ -0.22
PSEN1-206ENST00000553447 SLC35B1P78383 322 aa13.66□□□□□ -0.22
PSEN1-206ENST00000553447 FAM78BQ5VT40 261 aa13.66□□□□□ -0.22
PSEN1-206ENST00000553447 SPATA31B1PQ5VZV4 182 aa13.66□□□□□ -0.22
PSEN1-206ENST00000553447 ZNF329Q86UD4 541 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms