RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 OR10J1P30954 320 aa12.34□□□□□ -0.43
GCN1-209ENST00000551920 GAMTQ14353 236 aa12.34□□□□□ -0.43
GCN1-209ENST00000551920 ETFRF1Q6IPR1 90 aa12.34□□□□□ -0.43
GCN1-209ENST00000551920 ZNF600Q6ZNG1 722 aa12.34□□□□□ -0.43
GCN1-209ENST00000551920 TMEM61Q8N0U2 210 aa12.34□□□□□ -0.43
GCN1-209ENST00000551920 MARC2Q969Z3 335 aa12.34□□□□□ -0.43
GCN1-209ENST00000551920 SMIM8Q96KF7 97 aa12.34□□□□□ -0.43
GCN1-209ENST00000551920 C2orf50Q96LR7 162 aa12.34□□□□□ -0.43
GCN1-209ENST00000551920 C11orf1Q9H5F2 150 aa12.34□□□□□ -0.43
GCN1-209ENST00000551920 IGKV1D-37A0A075B6S9 117 aa12.33□□□□□ -0.44
GCN1-209ENST00000551920 C7orf66A4D0T2 115 aa12.33□□□□□ -0.44
GCN1-209ENST00000551920 PMS2P5A8MQ11 134 aa12.33□□□□□ -0.44
GCN1-209ENST00000551920 K7EMT4 169 aa12.33□□□□□ -0.44
GCN1-209ENST00000551920 K7EPK0 472 aa12.33□□□□□ -0.44
GCN1-209ENST00000551920 GOSR2O14653 212 aa12.33□□□□□ -0.44
GCN1-209ENST00000551920 SCAF4O95104 1147 aaKnown RBP12.33□□□□□ -0.44
GCN1-209ENST00000551920 SIX6O95475 246 aa12.33□□□□□ -0.44
GCN1-209ENST00000551920 GPX4P36969 197 aaPredicted RBP12.33□□□□□ -0.44
GCN1-209ENST00000551920 RAB11AP62491 216 aa12.33□□□□□ -0.44
GCN1-209ENST00000551920 LCN12Q6JVE5 192 aa12.33□□□□□ -0.44
GCN1-209ENST00000551920 GSG1LQ6UXU4 331 aa12.33□□□□□ -0.44
GCN1-209ENST00000551920 WDR89Q96FK6 387 aaPredicted RBP12.33□□□□□ -0.44
GCN1-209ENST00000551920 PSENENQ9NZ42 101 aa12.33□□□□□ -0.44
GCN1-209ENST00000551920 MRPL27Q9P0M9 148 aaKnown RBP12.33□□□□□ -0.44
GCN1-209ENST00000551920 STRAPQ9Y3F4 350 aaKnown RBP12.33□□□□□ -0.44
GCN1-209ENST00000551920 LSM4Q9Y4Z0 139 aaKnown RBP12.33□□□□□ -0.44
GCN1-209ENST00000551920 TGP01266 2768 aa12.33□□□□□ -0.44
GCN1-209ENST00000551920 IGKV1OR2-108A0A075B7D4 117 aa12.32□□□□□ -0.44
GCN1-209ENST00000551920 IGHV3-49A0A0A0MS15 119 aa12.32□□□□□ -0.44
GCN1-209ENST00000551920 TMEM14EPQ6UXP3 125 aa12.32□□□□□ -0.44
GCN1-209ENST00000551920 ACOT7LQ6ZUV0 252 aa12.32□□□□□ -0.44
GCN1-209ENST00000551920 OR1S2Q8NGQ3 325 aa12.32□□□□□ -0.44
GCN1-209ENST00000551920 OR2K2Q8NGT1 345 aa12.32□□□□□ -0.44
GCN1-209ENST00000551920 RAB40CQ96S21 281 aa12.32□□□□□ -0.44
GCN1-209ENST00000551920 TECRQ9NZ01 308 aaKnown RBP12.32□□□□□ -0.44
GCN1-209ENST00000551920 TRAV30A0A087WSZ9 112 aa12.31□□□□□ -0.44
GCN1-209ENST00000551920 IGHV7-4-1A0A0J9YVY3 117 aa12.31□□□□□ -0.44
GCN1-209ENST00000551920 ZNF785A8K8V0 405 aa12.31□□□□□ -0.44
GCN1-209ENST00000551920 APOHP02749 345 aaPredicted RBP12.31□□□□□ -0.44
GCN1-209ENST00000551920 H2BFSP57053 126 aa12.31□□□□□ -0.44
GCN1-209ENST00000551920 TAS2R30P59541 319 aa12.31□□□□□ -0.44
GCN1-209ENST00000551920 RPP30P78346 268 aaKnown RBP12.31□□□□□ -0.44
GCN1-209ENST00000551920 RAB32Q13637 225 aa12.31□□□□□ -0.44
GCN1-209ENST00000551920 Q8N1Y9 231 aa12.31□□□□□ -0.44
GCN1-209ENST00000551920 SLC35E1Q96K37 410 aa12.31□□□□□ -0.44
GCN1-209ENST00000551920 SMPXQ9UHP9 88 aa12.31□□□□□ -0.44
GCN1-209ENST00000551920 LSM5Q9Y4Y9 91 aaKnown RBP12.31□□□□□ -0.44
GCN1-209ENST00000551920 IGHV3OR16-13A0A075B7E8 117 aa12.3□□□□□ -0.44
GCN1-209ENST00000551920 IGHV3-74A0A0B4J1X5 117 aa12.3□□□□□ -0.44
GCN1-209ENST00000551920 TSC22D2O75157 780 aa12.3□□□□□ -0.44
GCN1-209ENST00000551920 METTL15P1P0C7V9 234 aa12.3□□□□□ -0.44
GCN1-209ENST00000551920 YPEL3P61236 119 aaPredicted RBP12.3□□□□□ -0.44
GCN1-209ENST00000551920 ARL16Q0P5N6 197 aa12.3□□□□□ -0.44
GCN1-209ENST00000551920 DCTN2Q13561 401 aaKnown RBP12.3□□□□□ -0.44
GCN1-209ENST00000551920 OR8G2PQ6IF36 304 aa12.3□□□□□ -0.44
GCN1-209ENST00000551920 ALG5Q9Y673 324 aa12.3□□□□□ -0.44
GCN1-209ENST00000551920 DNAH9Q9NYC9 4486 aa12.29□□□□□ -0.44
GCN1-209ENST00000551920 SORL1Q92673 2214 aa12.29□□□□□ -0.44
GCN1-209ENST00000551920 CHEK1O14757 476 aa12.29□□□□□ -0.44
GCN1-209ENST00000551920 TOMM40O96008 361 aa12.29□□□□□ -0.44
GCN1-209ENST00000551920 S100A10P60903 97 aa12.29□□□□□ -0.44
GCN1-209ENST00000551920 ZNF90Q03938 601 aa12.29□□□□□ -0.44
GCN1-209ENST00000551920 ST8SIA2Q92186 375 aa12.29□□□□□ -0.44
GCN1-209ENST00000551920 RNF2Q99496 336 aa12.29□□□□□ -0.44
GCN1-209ENST00000551920 RHPN1-AS1Q9BWJ2 59 aa12.29□□□□□ -0.44
GCN1-209ENST00000551920 TRAV14DV4A0A0A6YYC5 116 aa12.28□□□□□ -0.44
GCN1-209ENST00000551920 IGHV3-66A0A0C4DH42 116 aa12.28□□□□□ -0.44
GCN1-209ENST00000551920 SSNA1O43805 119 aa12.28□□□□□ -0.44
GCN1-209ENST00000551920 SCGB2A1O75556 95 aa12.28□□□□□ -0.44
GCN1-209ENST00000551920 PSG1P11464 419 aa12.28□□□□□ -0.44
GCN1-209ENST00000551920 USF2Q15853 346 aaPredicted RBP12.28□□□□□ -0.44
GCN1-209ENST00000551920 GUCA2BQ16661 112 aa12.28□□□□□ -0.44
GCN1-209ENST00000551920 DEFB121Q5J5C9 76 aa12.28□□□□□ -0.44
GCN1-209ENST00000551920 LILRB2Q8N423 598 aa12.28□□□□□ -0.44
GCN1-209ENST00000551920 THAP8Q8NA92 274 aa12.28□□□□□ -0.44
GCN1-209ENST00000551920 GINS3Q9BRX5 216 aa12.28□□□□□ -0.44
GCN1-209ENST00000551920 VSIRQ9H7M9 311 aa12.28□□□□□ -0.44
GCN1-209ENST00000551920 COL7A1Q02388 2944 aa12.27□□□□□ -0.45
GCN1-209ENST00000551920 ZFP92A6NM28 416 aa12.27□□□□□ -0.45
GCN1-209ENST00000551920 IL4P05112 153 aa12.27□□□□□ -0.45
GCN1-209ENST00000551920 CD7P09564 240 aa12.27□□□□□ -0.45
GCN1-209ENST00000551920 RD3LP0DJH9 198 aa12.27□□□□□ -0.45
GCN1-209ENST00000551920 CRYBB3P26998 211 aa12.27□□□□□ -0.45
GCN1-209ENST00000551920 WFDC10AQ9H1F0 79 aa12.27□□□□□ -0.45
GCN1-209ENST00000551920 MGAT4CQ9UBM8 478 aa12.27□□□□□ -0.45
GCN1-209ENST00000551920 L7N2F9 121 aa12.26□□□□□ -0.45
GCN1-209ENST00000551920 CAV2P51636 162 aa12.26□□□□□ -0.45
GCN1-209ENST00000551920 RRAS2P62070 204 aaPredicted RBP12.26□□□□□ -0.45
GCN1-209ENST00000551920 VAMP2P63027 116 aa12.26□□□□□ -0.45
GCN1-209ENST00000551920 AKR1C1Q04828 323 aa12.26□□□□□ -0.45
GCN1-209ENST00000551920 RGS21Q2M5E4 152 aa12.26□□□□□ -0.45
GCN1-209ENST00000551920 FAM90A2PQ658T7 463 aa12.26□□□□□ -0.45
GCN1-209ENST00000551920 Q8WTZ3 238 aa12.26□□□□□ -0.45
GCN1-209ENST00000551920 TRGV9Q99603 122 aa12.26□□□□□ -0.45
GCN1-209ENST00000551920 NMES1Q9C002 83 aa12.26□□□□□ -0.45
GCN1-209ENST00000551920 SMAD5-AS1Q9Y6J3 95 aa12.26□□□□□ -0.45
GCN1-209ENST00000551920 TRAV25A0A0B4J276 109 aa12.25□□□□□ -0.45
GCN1-209ENST00000551920 IGSF23A1L1A6 192 aa12.25□□□□□ -0.45
GCN1-209ENST00000551920 FAM24AA6NFZ4 105 aa12.25□□□□□ -0.45
GCN1-209ENST00000551920 H0YIZ8 118 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms