RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 ZNF562Q6V9R5 426 aa4.27□□□□□ -1.73
LSM3P2-201ENST00000551246 SH2D6Q7Z4S9 175 aa4.27□□□□□ -1.73
LSM3P2-201ENST00000551246 PPP1R32Q7Z5V6 425 aa4.27□□□□□ -1.73
LSM3P2-201ENST00000551246 ZADH2Q8N4Q0 377 aa4.27□□□□□ -1.73
LSM3P2-201ENST00000551246 DRAM1Q8N682 238 aa4.27□□□□□ -1.73
LSM3P2-201ENST00000551246 OSR1Q8TAX0 266 aaPredicted RBP4.27□□□□□ -1.73
LSM3P2-201ENST00000551246 SPTSSAQ969W0 71 aa4.27□□□□□ -1.73
LSM3P2-201ENST00000551246 CARD19Q96LW7 228 aa4.27□□□□□ -1.73
LSM3P2-201ENST00000551246 SLC25A33Q9BSK2 321 aa4.27□□□□□ -1.73
LSM3P2-201ENST00000551246 GFRA4Q9GZZ7 299 aa4.27□□□□□ -1.73
LSM3P2-201ENST00000551246 YAE1D1Q9NRH1 226 aa4.27□□□□□ -1.73
LSM3P2-201ENST00000551246 ZNF492Q9P255 531 aa4.27□□□□□ -1.73
LSM3P2-201ENST00000551246 VPREB3Q9UKI3 123 aa4.27□□□□□ -1.73
LSM3P2-201ENST00000551246 MRPS17Q9Y2R5 130 aaKnown RBP4.27□□□□□ -1.73
LSM3P2-201ENST00000551246 KLF12Q9Y4X4 402 aa4.27□□□□□ -1.73
LSM3P2-201ENST00000551246 TRAV24A0A0B4J272 114 aa4.26□□□□□ -1.73
LSM3P2-201ENST00000551246 A0A1B0GW15 77 aa4.26□□□□□ -1.73
LSM3P2-201ENST00000551246 C19orf71A6NCJ1 209 aa4.26□□□□□ -1.73
LSM3P2-201ENST00000551246 TMEM8BA6NDV4 472 aa4.26□□□□□ -1.73
LSM3P2-201ENST00000551246 GAGE12JA6NER3 117 aa4.26□□□□□ -1.73
LSM3P2-201ENST00000551246 LINC01546A6NGU7 62 aa4.26□□□□□ -1.73
LSM3P2-201ENST00000551246 MANSC4A6NHS7 340 aaPredicted RBP4.26□□□□□ -1.73
LSM3P2-201ENST00000551246 ZNF785A8K8V0 405 aa4.26□□□□□ -1.73
LSM3P2-201ENST00000551246 B5MCH6 92 aa4.26□□□□□ -1.73
LSM3P2-201ENST00000551246 C15orf65H3BRN8 121 aa4.26□□□□□ -1.73
LSM3P2-201ENST00000551246 KIR2DS3K7RE56 304 aa4.26□□□□□ -1.73
LSM3P2-201ENST00000551246 NDUFS7O75251 213 aa4.26□□□□□ -1.73
LSM3P2-201ENST00000551246 GAGE7O76087 117 aa4.26□□□□□ -1.73
LSM3P2-201ENST00000551246 CA1P00915 261 aaPredicted RBP4.26□□□□□ -1.73
LSM3P2-201ENST00000551246 CLEC3BP05452 202 aa4.26□□□□□ -1.73
LSM3P2-201ENST00000551246 SP1P08047 785 aa4.26□□□□□ -1.73
LSM3P2-201ENST00000551246 GAGE12FP0CL80 117 aa4.26□□□□□ -1.73
LSM3P2-201ENST00000551246 GAGE12GP0CL81 117 aa4.26□□□□□ -1.73
LSM3P2-201ENST00000551246 GAGE12IP0CL82 117 aa4.26□□□□□ -1.73
LSM3P2-201ENST00000551246 DUTP33316 252 aaKnown RBP4.26□□□□□ -1.73
LSM3P2-201ENST00000551246 MPV17P39210 176 aa4.26□□□□□ -1.73
LSM3P2-201ENST00000551246 DSCR4P56555 118 aaPredicted RBP4.26□□□□□ -1.73
LSM3P2-201ENST00000551246 EDDM3BP56851 147 aa4.26□□□□□ -1.73
LSM3P2-201ENST00000551246 ERVK11-1P61568 191 aa4.26□□□□□ -1.73
LSM3P2-201ENST00000551246 RPL30P62888 115 aaKnown RBP4.26□□□□□ -1.73
LSM3P2-201ENST00000551246 SLC35B1P78383 322 aa4.26□□□□□ -1.73
LSM3P2-201ENST00000551246 GAGE4Q13068 117 aa4.26□□□□□ -1.73
LSM3P2-201ENST00000551246 RRN3P1Q2M238 152 aa4.26□□□□□ -1.73
LSM3P2-201ENST00000551246 PRR30Q53SZ7 412 aaPredicted RBP4.26□□□□□ -1.73
LSM3P2-201ENST00000551246 TMEM196Q5HYL7 178 aa4.26□□□□□ -1.73
LSM3P2-201ENST00000551246 CFAP126Q5VTH2 177 aa4.26□□□□□ -1.73
LSM3P2-201ENST00000551246 YRDCQ86U90 279 aaKnown RBP4.26□□□□□ -1.73
LSM3P2-201ENST00000551246 SMIM20Q8N5G0 67 aa4.26□□□□□ -1.73
LSM3P2-201ENST00000551246 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.26□□□□□ -1.73
LSM3P2-201ENST00000551246 TMEM158Q8WZ71 300 aa4.26□□□□□ -1.73
LSM3P2-201ENST00000551246 RPEQ96AT9 228 aa4.26□□□□□ -1.73
LSM3P2-201ENST00000551246 FAM167A-AS1Q96KT0 104 aa4.26□□□□□ -1.73
LSM3P2-201ENST00000551246 MLST8Q9BVC4 326 aa4.26□□□□□ -1.73
LSM3P2-201ENST00000551246 IL36RNQ9UBH0 155 aa4.26□□□□□ -1.73
LSM3P2-201ENST00000551246 KCNS2Q9ULS6 477 aa4.26□□□□□ -1.73
LSM3P2-201ENST00000551246 U3KQK5 164 aa4.26□□□□□ -1.73
LSM3P2-201ENST00000551246 TDRD6O60522 2096 aaKnown RBP4.25□□□□□ -1.73
LSM3P2-201ENST00000551246 A0A1W2PQM1 296 aa4.25□□□□□ -1.73
LSM3P2-201ENST00000551246 FABP5P3A8MUU1 101 aa4.25□□□□□ -1.73
LSM3P2-201ENST00000551246 SS18L1O75177 396 aaPredicted RBP4.25□□□□□ -1.73
LSM3P2-201ENST00000551246 APOA2P02652 100 aa4.25□□□□□ -1.73
LSM3P2-201ENST00000551246 CXCL10P02778 98 aa4.25□□□□□ -1.73
LSM3P2-201ENST00000551246 BCL3P20749 454 aa4.25□□□□□ -1.73
LSM3P2-201ENST00000551246 FBLP22087 321 aaKnown RBP4.25□□□□□ -1.73
LSM3P2-201ENST00000551246 FABP6P51161 128 aa4.25□□□□□ -1.73
LSM3P2-201ENST00000551246 TAS2R45P59539 299 aa4.25□□□□□ -1.73
LSM3P2-201ENST00000551246 HBBP68871 147 aa4.25□□□□□ -1.73
LSM3P2-201ENST00000551246 LY6DQ14210 128 aa4.25□□□□□ -1.73
LSM3P2-201ENST00000551246 MIR17HGQ75NE6 70 aa4.25□□□□□ -1.73
LSM3P2-201ENST00000551246 ANKRD37Q7Z713 158 aa4.25□□□□□ -1.73
LSM3P2-201ENST00000551246 NFE4Q86UQ8 179 aa4.25□□□□□ -1.73
LSM3P2-201ENST00000551246 KMT2EQ8IZD2 1858 aa4.25□□□□□ -1.73
LSM3P2-201ENST00000551246 RPRMLQ8N4K4 120 aa4.25□□□□□ -1.73
LSM3P2-201ENST00000551246 PPP1R35Q8TAP8 253 aa4.25□□□□□ -1.73
LSM3P2-201ENST00000551246 NRGNQ92686 78 aa4.25□□□□□ -1.73
LSM3P2-201ENST00000551246 ARPC1AQ92747 370 aa4.25□□□□□ -1.73
LSM3P2-201ENST00000551246 SNRNP40Q96DI7 357 aaKnown RBP4.25□□□□□ -1.73
LSM3P2-201ENST00000551246 PRELID3AQ96N28 172 aa4.25□□□□□ -1.73
LSM3P2-201ENST00000551246 MDFICQ9P1T7 246 aa4.25□□□□□ -1.73
LSM3P2-201ENST00000551246 COL5A1P20908 1838 aaPredicted RBP4.25□□□□□ -1.73
LSM3P2-201ENST00000551246 GTF3C1Q12789 2109 aa4.24□□□□□ -1.73
LSM3P2-201ENST00000551246 TRGV8A0A0C4DH27 118 aa4.24□□□□□ -1.73
LSM3P2-201ENST00000551246 TRBV6-1A0A0K0K1D8 114 aa4.24□□□□□ -1.73
LSM3P2-201ENST00000551246 KRTAP23-1A1A580 65 aa4.24□□□□□ -1.73
LSM3P2-201ENST00000551246 TMEM213A2RRL7 107 aa4.24□□□□□ -1.73
LSM3P2-201ENST00000551246 A8MWL6 223 aa4.24□□□□□ -1.73
LSM3P2-201ENST00000551246 CCDC179H3BU77 68 aa4.24□□□□□ -1.73
LSM3P2-201ENST00000551246 PRRG2O14669 202 aa4.24□□□□□ -1.73
LSM3P2-201ENST00000551246 SNAI2O43623 268 aa4.24□□□□□ -1.73
LSM3P2-201ENST00000551246 FSTL3O95633 263 aa4.24□□□□□ -1.73
LSM3P2-201ENST00000551246 SLC25A5P05141 298 aaKnown RBP4.24□□□□□ -1.73
LSM3P2-201ENST00000551246 CELA2AP08217 269 aa4.24□□□□□ -1.73
LSM3P2-201ENST00000551246 PF4V1P10720 104 aa4.24□□□□□ -1.73
LSM3P2-201ENST00000551246 FKBP2P26885 142 aaKnown RBP4.24□□□□□ -1.73
LSM3P2-201ENST00000551246 CFHR2P36980 270 aa4.24□□□□□ -1.73
LSM3P2-201ENST00000551246 ID1P41134 155 aa4.24□□□□□ -1.73
LSM3P2-201ENST00000551246 CXCL12P48061 93 aa4.24□□□□□ -1.73
LSM3P2-201ENST00000551246 RPS21P63220 83 aaKnown RBP4.24□□□□□ -1.73
LSM3P2-201ENST00000551246 CATR1Q13166 79 aa4.24□□□□□ -1.73
LSM3P2-201ENST00000551246 DIAPH2-AS1Q14236 149 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms