RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 CPAMD8Q8IZJ3 1885 aa3.37□□□□□ -1.87
CPSF6-206ENST00000550987 EML6Q6ZMW3 1958 aa3.36□□□□□ -1.87
CPSF6-206ENST00000550987 TGIF2-C20orf24A0A0A6YYL0 155 aa3.36□□□□□ -1.87
CPSF6-206ENST00000550987 A0A1B0GV90 55 aa3.36□□□□□ -1.87
CPSF6-206ENST00000550987 A0A1B0GVY2 172 aa3.36□□□□□ -1.87
CPSF6-206ENST00000550987 LOC285095A0A1B0GVY8 99 aa3.36□□□□□ -1.87
CPSF6-206ENST00000550987 FAM159BA6NKW6 160 aa3.36□□□□□ -1.87
CPSF6-206ENST00000550987 SLC22A1O15245 554 aa3.36□□□□□ -1.87
CPSF6-206ENST00000550987 ORC5O43913 435 aa3.36□□□□□ -1.87
CPSF6-206ENST00000550987 STK16O75716 305 aa3.36□□□□□ -1.87
CPSF6-206ENST00000550987 GADD45GO95257 159 aa3.36□□□□□ -1.87
CPSF6-206ENST00000550987 GPR75O95800 540 aa3.36□□□□□ -1.87
CPSF6-206ENST00000550987 BPGMP07738 259 aa3.36□□□□□ -1.87
CPSF6-206ENST00000550987 PAX6P26367 422 aa3.36□□□□□ -1.87
CPSF6-206ENST00000550987 OPRK1P41145 380 aa3.36□□□□□ -1.87
CPSF6-206ENST00000550987 AKR1C3P42330 323 aa3.36□□□□□ -1.87
CPSF6-206ENST00000550987 MAP2K4P45985 399 aa3.36□□□□□ -1.87
CPSF6-206ENST00000550987 BAXQ07812 192 aa3.36□□□□□ -1.87
CPSF6-206ENST00000550987 CDK10Q15131 360 aa3.36□□□□□ -1.87
CPSF6-206ENST00000550987 RSU1Q15404 277 aa3.36□□□□□ -1.87
CPSF6-206ENST00000550987 BATFQ16520 125 aa3.36□□□□□ -1.87
CPSF6-206ENST00000550987 NCBP2-AS2Q69YL0 99 aa3.36□□□□□ -1.87
CPSF6-206ENST00000550987 LAMTOR1Q6IAA8 161 aa3.36□□□□□ -1.87
CPSF6-206ENST00000550987 TBPL2Q6SJ96 375 aa3.36□□□□□ -1.87
CPSF6-206ENST00000550987 UGT2A3Q6UWM9 527 aa3.36□□□□□ -1.87
CPSF6-206ENST00000550987 WDR86Q86TI4 376 aa3.36□□□□□ -1.87
CPSF6-206ENST00000550987 OR9A2Q8NGT5 310 aa3.36□□□□□ -1.87
CPSF6-206ENST00000550987 CYYR1Q96J86 154 aa3.36□□□□□ -1.87
CPSF6-206ENST00000550987 PPP1R2P1Q96PQ5 205 aa3.36□□□□□ -1.87
CPSF6-206ENST00000550987 RNF157Q96PX1 679 aa3.36□□□□□ -1.87
CPSF6-206ENST00000550987 MED18Q9BUE0 208 aa3.36□□□□□ -1.87
CPSF6-206ENST00000550987 TAPBPLQ9BX59 468 aa3.36□□□□□ -1.87
CPSF6-206ENST00000550987 MS4A8Q9BY19 250 aa3.36□□□□□ -1.87
CPSF6-206ENST00000550987 OR51I1Q9H343 314 aa3.36□□□□□ -1.87
CPSF6-206ENST00000550987 FBXL15Q9H469 300 aa3.36□□□□□ -1.87
CPSF6-206ENST00000550987 COPZ2Q9P299 210 aa3.36□□□□□ -1.87
CPSF6-206ENST00000550987 UQCRHLA0A096LP55 91 aa3.35□□□□□ -1.87
CPSF6-206ENST00000550987 IGHV7-4-1A0A0J9YVY3 117 aa3.35□□□□□ -1.87
CPSF6-206ENST00000550987 C5orf58C9J3I9 102 aa3.35□□□□□ -1.87
CPSF6-206ENST00000550987 H0YGG7 62 aa3.35□□□□□ -1.87
CPSF6-206ENST00000550987 TRAPPC2LH3BP13 241 aa3.35□□□□□ -1.87
CPSF6-206ENST00000550987 DLEU1O43261 78 aa3.35□□□□□ -1.87
CPSF6-206ENST00000550987 OR2J2O76002 312 aa3.35□□□□□ -1.87
CPSF6-206ENST00000550987 HLA-DQB1P01920 261 aa3.35□□□□□ -1.87
CPSF6-206ENST00000550987 IFNA4P05014 189 aa3.35□□□□□ -1.87
CPSF6-206ENST00000550987 OR5G3P0C626 314 aa3.35□□□□□ -1.87
CPSF6-206ENST00000550987 GPX2P18283 190 aa3.35□□□□□ -1.87
CPSF6-206ENST00000550987 PRSS3P35030 304 aa3.35□□□□□ -1.87
CPSF6-206ENST00000550987 RHOBP62745 196 aa3.35□□□□□ -1.87
CPSF6-206ENST00000550987 ELF3P78545 371 aaPredicted RBP3.35□□□□□ -1.87
CPSF6-206ENST00000550987 SURF2Q15527 256 aaPredicted RBP3.35□□□□□ -1.87
CPSF6-206ENST00000550987 CLEC12AQ5QGZ9 265 aa3.35□□□□□ -1.87
CPSF6-206ENST00000550987 RPS19BP1Q86WX3 136 aaKnown RBP3.35□□□□□ -1.87
CPSF6-206ENST00000550987 KRTAP11-1Q8IUC1 163 aa3.35□□□□□ -1.87
CPSF6-206ENST00000550987 C1orf158Q8N1D5 194 aa3.35□□□□□ -1.87
CPSF6-206ENST00000550987 LRRC18Q8N456 261 aa3.35□□□□□ -1.87
CPSF6-206ENST00000550987 SLC35G3Q8N808 338 aa3.35□□□□□ -1.87
CPSF6-206ENST00000550987 ZFP62Q8NB50 900 aaPredicted RBP3.35□□□□□ -1.87
CPSF6-206ENST00000550987 OR1L1Q8NH94 360 aa3.35□□□□□ -1.87
CPSF6-206ENST00000550987 MFSD8Q8NHS3 518 aa3.35□□□□□ -1.87
CPSF6-206ENST00000550987 UBALD1Q8TB05 177 aa3.35□□□□□ -1.87
CPSF6-206ENST00000550987 RNASE6Q93091 150 aaKnown RBP3.35□□□□□ -1.87
CPSF6-206ENST00000550987 SMIM8Q96KF7 97 aa3.35□□□□□ -1.87
CPSF6-206ENST00000550987 PGLYRP3Q96LB9 341 aa3.35□□□□□ -1.87
CPSF6-206ENST00000550987 SERPINI1Q99574 410 aa3.35□□□□□ -1.87
CPSF6-206ENST00000550987 VPS25Q9BRG1 176 aa3.35□□□□□ -1.87
CPSF6-206ENST00000550987 MRPL20Q9BYC9 149 aaKnown RBP3.35□□□□□ -1.87
CPSF6-206ENST00000550987 ABCG5Q9H222 651 aa3.35□□□□□ -1.87
CPSF6-206ENST00000550987 VSIRQ9H7M9 311 aa3.35□□□□□ -1.87
CPSF6-206ENST00000550987 C14orf105Q9NVL8 296 aa3.35□□□□□ -1.87
CPSF6-206ENST00000550987 CARHSP1Q9Y2V2 147 aaKnown RBP3.35□□□□□ -1.87
CPSF6-206ENST00000550987 YTHDF2Q9Y5A9 579 aaKnown RBP3.35□□□□□ -1.87
CPSF6-206ENST00000550987 HEATR5AQ86XA9 2040 aa3.35□□□□□ -1.87
CPSF6-206ENST00000550987 SYNE2Q8WXH0 6885 aaKnown RBP3.35□□□□□ -1.87
CPSF6-206ENST00000550987 SCN3AQ9NY46 2000 aa3.34□□□□□ -1.87
CPSF6-206ENST00000550987 A0A087WUJ7 227 aa3.34□□□□□ -1.87
CPSF6-206ENST00000550987 BORCS7-ASMTA0A0B4J1R7 106 aa3.34□□□□□ -1.87
CPSF6-206ENST00000550987 A0A0X1KG70 313 aa3.34□□□□□ -1.87
CPSF6-206ENST00000550987 TEX50A0A1B0GTY4 177 aa3.34□□□□□ -1.87
CPSF6-206ENST00000550987 COPEO14579 308 aa3.34□□□□□ -1.87
CPSF6-206ENST00000550987 APOA2P02652 100 aa3.34□□□□□ -1.87
CPSF6-206ENST00000550987 IL3P08700 152 aa3.34□□□□□ -1.87
CPSF6-206ENST00000550987 TSPAN19P0C672 248 aa3.34□□□□□ -1.87
CPSF6-206ENST00000550987 NPY1RP25929 384 aa3.34□□□□□ -1.87
CPSF6-206ENST00000550987 TAS2R43P59537 309 aa3.34□□□□□ -1.87
CPSF6-206ENST00000550987 RPS20P60866 119 aaKnown RBP3.34□□□□□ -1.87
CPSF6-206ENST00000550987 SLC35A2P78381 396 aa3.34□□□□□ -1.87
CPSF6-206ENST00000550987 PSG4Q00888 419 aa3.34□□□□□ -1.87
CPSF6-206ENST00000550987 IFITM2Q01629 132 aa3.34□□□□□ -1.87
CPSF6-206ENST00000550987 BAMBIQ13145 260 aa3.34□□□□□ -1.87
CPSF6-206ENST00000550987 FBXL19-AS1Q494R0 122 aa3.34□□□□□ -1.87
CPSF6-206ENST00000550987 RNASE13Q5GAN3 156 aaKnown RBP3.34□□□□□ -1.87
CPSF6-206ENST00000550987 TMEM78Q5T7P6 136 aa3.34□□□□□ -1.87
CPSF6-206ENST00000550987 Q6P435 159 aa3.34□□□□□ -1.87
CPSF6-206ENST00000550987 GAPTQ8N292 157 aa3.34□□□□□ -1.87
CPSF6-206ENST00000550987 ZCCHC24Q8N2G6 241 aaKnown RBP3.34□□□□□ -1.87
CPSF6-206ENST00000550987 OR4P4Q8NGL7 312 aa3.34□□□□□ -1.87
CPSF6-206ENST00000550987 OR9Q1Q8NGQ5 310 aa3.34□□□□□ -1.87
CPSF6-206ENST00000550987 OR13C4Q8NGS5 318 aa3.34□□□□□ -1.87
CPSF6-206ENST00000550987 ZNRF2Q8NHG8 242 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms