RNA–Protein interactions for RNA: ENST00000550444.1

HCFC2-205, Transcript of host cell factor C2, humanhuman

TSL 4

Gene HCFC2, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-205ENST00000550444 SP6Q3SY56 376 aa12.27□□□□□ -0.45
HCFC2-205ENST00000550444 RNASE11Q8TAA1 199 aaKnown RBP12.27□□□□□ -0.45
HCFC2-205ENST00000550444 GLMPQ8WWB7 406 aa12.27□□□□□ -0.45
HCFC2-205ENST00000550444 COMMD3Q9UBI1 195 aa12.27□□□□□ -0.45
HCFC2-205ENST00000550444 PKD1P98161 4303 aa12.27□□□□□ -0.45
HCFC2-205ENST00000550444 MUC4Q99102 2169 aa12.27□□□□□ -0.45
HCFC2-205ENST00000550444 C3orf85A0A1B0GTC6 90 aa12.26□□□□□ -0.45
HCFC2-205ENST00000550444 RPS10-NUDT3A0A1W2PQS6 291 aa12.26□□□□□ -0.45
HCFC2-205ENST00000550444 P0C879 139 aa12.26□□□□□ -0.45
HCFC2-205ENST00000550444 RND3P61587 244 aa12.26□□□□□ -0.45
HCFC2-205ENST00000550444 DHODHQ02127 395 aa12.26□□□□□ -0.45
HCFC2-205ENST00000550444 SOHLH1Q5JUK2 328 aa12.26□□□□□ -0.45
HCFC2-205ENST00000550444 OR1S2Q8NGQ3 325 aa12.26□□□□□ -0.45
HCFC2-205ENST00000550444 RRNAD1Q96FB5 475 aaKnown RBP12.26□□□□□ -0.45
HCFC2-205ENST00000550444 SCPEP1Q9HB40 452 aa12.26□□□□□ -0.45
HCFC2-205ENST00000550444 A0A0G2JRQ6 117 aa12.25□□□□□ -0.45
HCFC2-205ENST00000550444 IGLC1P0CG04 106 aa12.25□□□□□ -0.45
HCFC2-205ENST00000550444 HTN3P15516 51 aa12.25□□□□□ -0.45
HCFC2-205ENST00000550444 OR10J1P30954 320 aa12.25□□□□□ -0.45
HCFC2-205ENST00000550444 RND2P52198 227 aa12.25□□□□□ -0.45
HCFC2-205ENST00000550444 RNASE12Q5GAN4 147 aaKnown RBP12.25□□□□□ -0.45
HCFC2-205ENST00000550444 Q6ZRM9 215 aa12.25□□□□□ -0.45
HCFC2-205ENST00000550444 NRN1Q9NPD7 142 aa12.25□□□□□ -0.45
HCFC2-205ENST00000550444 PLA2G2EQ9NZK7 142 aa12.25□□□□□ -0.45
HCFC2-205ENST00000550444 CD74P04233 296 aa12.24□□□□□ -0.45
HCFC2-205ENST00000550444 IL4P05112 153 aa12.24□□□□□ -0.45
HCFC2-205ENST00000550444 USF2Q15853 346 aaPredicted RBP12.24□□□□□ -0.45
HCFC2-205ENST00000550444 PRSS54Q6PEW0 395 aa12.24□□□□□ -0.45
HCFC2-205ENST00000550444 Q6ZR54 194 aa12.24□□□□□ -0.45
HCFC2-205ENST00000550444 ZNF486Q96H40 463 aaPredicted RBP12.24□□□□□ -0.45
HCFC2-205ENST00000550444 COPZ2Q9P299 210 aa12.24□□□□□ -0.45
HCFC2-205ENST00000550444 TMEM189A5PLL7 270 aa12.23□□□□□ -0.45
HCFC2-205ENST00000550444 HLA-DRB4P13762 266 aa12.23□□□□□ -0.45
HCFC2-205ENST00000550444 HTR2BP41595 481 aa12.23□□□□□ -0.45
HCFC2-205ENST00000550444 DEFB1P60022 68 aa12.23□□□□□ -0.45
HCFC2-205ENST00000550444 SPCS3P61009 180 aa12.23□□□□□ -0.45
HCFC2-205ENST00000550444 YPEL3P61236 119 aaPredicted RBP12.23□□□□□ -0.45
HCFC2-205ENST00000550444 BSXQ3C1V8 233 aa12.23□□□□□ -0.45
HCFC2-205ENST00000550444 SIGLEC15Q6ZMC9 328 aa12.23□□□□□ -0.45
HCFC2-205ENST00000550444 ZNF705AQ6ZN79 300 aaPredicted RBP12.23□□□□□ -0.45
HCFC2-205ENST00000550444 LINC00052Q96N35 136 aa12.23□□□□□ -0.45
HCFC2-205ENST00000550444 NEU1Q99519 415 aa12.23□□□□□ -0.45
HCFC2-205ENST00000550444 HEYLQ9NQ87 328 aaPredicted RBP12.23□□□□□ -0.45
HCFC2-205ENST00000550444 HLA-DRB4X5D2U9 266 aa12.23□□□□□ -0.45
HCFC2-205ENST00000550444 SMIM9A6NGZ8 99 aa12.22□□□□□ -0.45
HCFC2-205ENST00000550444 ZNF705FA8MVS1 300 aaPredicted RBP12.22□□□□□ -0.45
HCFC2-205ENST00000550444 ZNF705DP0CH99 300 aaPredicted RBP12.22□□□□□ -0.45
HCFC2-205ENST00000550444 ZNF705BP0CI00 300 aaPredicted RBP12.22□□□□□ -0.45
HCFC2-205ENST00000550444 RNASE10Q5GAN6 216 aaKnown RBP12.22□□□□□ -0.45
HCFC2-205ENST00000550444 C1orf134Q5TEV5 83 aa12.22□□□□□ -0.45
HCFC2-205ENST00000550444 GDF5OSQ5U4N7 250 aa12.22□□□□□ -0.45
HCFC2-205ENST00000550444 FAM222AQ5U5X8 452 aa12.22□□□□□ -0.45
HCFC2-205ENST00000550444 FAM210BQ96KR6 192 aa12.22□□□□□ -0.45
HCFC2-205ENST00000550444 NIPSNAP3BQ9BS92 247 aa12.22□□□□□ -0.45
HCFC2-205ENST00000550444 SEPSECSQ9HD40 501 aaKnown RBP12.22□□□□□ -0.45
HCFC2-205ENST00000550444 DKK2Q9UBU2 259 aa12.22□□□□□ -0.45
HCFC2-205ENST00000550444 RFNGQ9Y644 331 aa12.22□□□□□ -0.45
HCFC2-205ENST00000550444 BUB3O43684 328 aa12.21□□□□□ -0.45
HCFC2-205ENST00000550444 APOA1P02647 267 aa12.21□□□□□ -0.45
HCFC2-205ENST00000550444 RD3LP0DJH9 198 aa12.21□□□□□ -0.45
HCFC2-205ENST00000550444 SLC25A4P12235 298 aa12.21□□□□□ -0.45
HCFC2-205ENST00000550444 NKX2-1P43699 371 aaPredicted RBP12.21□□□□□ -0.45
HCFC2-205ENST00000550444 CCDC71LQ8N9Z2 235 aa12.21□□□□□ -0.45
HCFC2-205ENST00000550444 NPIPB3Q92617 1050 aa12.21□□□□□ -0.45
HCFC2-205ENST00000550444 ACY3Q96HD9 319 aa12.21□□□□□ -0.45
HCFC2-205ENST00000550444 KLK11Q9UBX7 282 aa12.21□□□□□ -0.45
HCFC2-205ENST00000550444 GSTZ1O43708 216 aaPredicted RBP12.2□□□□□ -0.46
HCFC2-205ENST00000550444 HPGDSO60760 199 aa12.2□□□□□ -0.46
HCFC2-205ENST00000550444 CD3DP04234 171 aa12.2□□□□□ -0.46
HCFC2-205ENST00000550444 LHFPL1Q86WI0 220 aa12.2□□□□□ -0.46
HCFC2-205ENST00000550444 OR4B1Q8NGF8 309 aa12.2□□□□□ -0.46
HCFC2-205ENST00000550444 OR51G1Q8NGK1 321 aa12.2□□□□□ -0.46
HCFC2-205ENST00000550444 ZFAND1Q8TCF1 268 aa12.2□□□□□ -0.46
HCFC2-205ENST00000550444 RNASEH2CQ8TDP1 164 aaKnown RBP12.2□□□□□ -0.46
HCFC2-205ENST00000550444 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.2□□□□□ -0.46
HCFC2-205ENST00000550444 TEX48A0A1B0GUV7 120 aa12.19□□□□□ -0.46
HCFC2-205ENST00000550444 CEBPZOSA8MTT3 80 aa12.19□□□□□ -0.46
HCFC2-205ENST00000550444 ATP6V1G2O95670 118 aa12.19□□□□□ -0.46
HCFC2-205ENST00000550444 ELK1P19419 428 aa12.19□□□□□ -0.46
HCFC2-205ENST00000550444 UCP1P25874 307 aa12.19□□□□□ -0.46
HCFC2-205ENST00000550444 RNF212Q495C1 297 aa12.19□□□□□ -0.46
HCFC2-205ENST00000550444 SCGB2B2Q4G0G5 96 aa12.19□□□□□ -0.46
HCFC2-205ENST00000550444 C2orf83Q53S99 150 aa12.19□□□□□ -0.46
HCFC2-205ENST00000550444 SLC24A4Q8NFF2 622 aa12.19□□□□□ -0.46
HCFC2-205ENST00000550444 OR52E5Q8NH55 327 aa12.19□□□□□ -0.46
HCFC2-205ENST00000550444 YIPF6Q96EC8 236 aa12.19□□□□□ -0.46
HCFC2-205ENST00000550444 PBDC1Q9BVG4 233 aa12.19□□□□□ -0.46
HCFC2-205ENST00000550444 FAM25AB3EWG3 89 aa12.18□□□□□ -0.46
HCFC2-205ENST00000550444 FAM25CB3EWG5 89 aa12.18□□□□□ -0.46
HCFC2-205ENST00000550444 FAM25GB3EWG6 89 aa12.18□□□□□ -0.46
HCFC2-205ENST00000550444 NXPH3O95157 252 aa12.18□□□□□ -0.46
HCFC2-205ENST00000550444 TOMM40O96008 361 aa12.18□□□□□ -0.46
HCFC2-205ENST00000550444 PSG1P11464 419 aa12.18□□□□□ -0.46
HCFC2-205ENST00000550444 ETFRF1Q6IPR1 90 aa12.18□□□□□ -0.46
HCFC2-205ENST00000550444 TMEM88Q6PEY1 159 aa12.18□□□□□ -0.46
HCFC2-205ENST00000550444 GSG1LQ6UXU4 331 aa12.18□□□□□ -0.46
HCFC2-205ENST00000550444 ARRDC1Q8N5I2 433 aa12.18□□□□□ -0.46
HCFC2-205ENST00000550444 OR13C8Q8NGS7 320 aa12.18□□□□□ -0.46
HCFC2-205ENST00000550444 C7orf50Q9BRJ6 194 aaKnown RBP12.18□□□□□ -0.46
HCFC2-205ENST00000550444 SAV1Q9H4B6 383 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms