RNA–Protein interactions for RNA: ENST00000549308.5

PTPRR-209, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-209ENST00000549308 TRGV3P03979 118 aa9.44□□□□□ -0.9
PTPRR-209ENST00000549308 IGLC1P0CG04 106 aa9.44□□□□□ -0.9
PTPRR-209ENST00000549308 CDC34P49427 236 aaPredicted RBP9.44□□□□□ -0.9
PTPRR-209ENST00000549308 C15orf32Q32M92 178 aa9.44□□□□□ -0.9
PTPRR-209ENST00000549308 TIGITQ495A1 244 aa9.44□□□□□ -0.9
PTPRR-209ENST00000549308 LCN15Q6UWW0 184 aa9.44□□□□□ -0.9
PTPRR-209ENST00000549308 RPP25LQ8N5L8 163 aaKnown RBP9.44□□□□□ -0.9
PTPRR-209ENST00000549308 NECAP1Q8NC96 275 aa9.44□□□□□ -0.9
PTPRR-209ENST00000549308 ZNF418Q8TF45 676 aaPredicted RBP9.44□□□□□ -0.9
PTPRR-209ENST00000549308 SFT2D1Q8WV19 159 aa9.44□□□□□ -0.9
PTPRR-209ENST00000549308 RCC1LQ96I51 464 aaKnown RBP9.44□□□□□ -0.9
PTPRR-209ENST00000549308 ZNF702PQ9H963 129 aa9.44□□□□□ -0.9
PTPRR-209ENST00000549308 ZNF580Q9UK33 172 aa9.44□□□□□ -0.9
PTPRR-209ENST00000549308 FAM223BA6NKX1 122 aa9.43□□□□□ -0.9
PTPRR-209ENST00000549308 NUDT19A8MXV4 375 aa9.43□□□□□ -0.9
PTPRR-209ENST00000549308 SCGB2A1O75556 95 aa9.43□□□□□ -0.9
PTPRR-209ENST00000549308 EIF3GO75821 320 aaKnown RBP eCLIP9.43□□□□□ -0.9
PTPRR-209ENST00000549308 FABP1P07148 127 aa9.43□□□□□ -0.9
PTPRR-209ENST00000549308 PF4V1P10720 104 aa9.43□□□□□ -0.9
PTPRR-209ENST00000549308 PPIFP30405 207 aaKnown RBP9.43□□□□□ -0.9
PTPRR-209ENST00000549308 TPPP2P59282 170 aa9.43□□□□□ -0.9
PTPRR-209ENST00000549308 ATP5G2Q06055 141 aa9.43□□□□□ -0.9
PTPRR-209ENST00000549308 ZNF726P1Q15940 193 aa9.43□□□□□ -0.9
PTPRR-209ENST00000549308 IL34Q6ZMJ4 242 aa9.43□□□□□ -0.9
PTPRR-209ENST00000549308 Q71RC1 249 aaPredicted RBP9.43□□□□□ -0.9
PTPRR-209ENST00000549308 SSX7Q7RTT5 188 aa9.43□□□□□ -0.9
PTPRR-209ENST00000549308 FAM223AQ8IWN6 122 aa9.43□□□□□ -0.9
PTPRR-209ENST00000549308 MBD3L1Q8WWY6 194 aa9.43□□□□□ -0.9
PTPRR-209ENST00000549308 MARC2Q969Z3 335 aa9.43□□□□□ -0.9
PTPRR-209ENST00000549308 EEF1AKMT3Q96AZ1 226 aa9.43□□□□□ -0.9
PTPRR-209ENST00000549308 CITED4Q96RK1 184 aa9.43□□□□□ -0.9
PTPRR-209ENST00000549308 TXN2Q99757 166 aa9.43□□□□□ -0.9
PTPRR-209ENST00000549308 TEX15Q9BXT5 2789 aa9.42□□□□□ -0.9
PTPRR-209ENST00000549308 MAP1LC3B2A6NCE7 125 aa9.42□□□□□ -0.9
PTPRR-209ENST00000549308 COX7A2P2O60397 106 aa9.42□□□□□ -0.9
PTPRR-209ENST00000549308 RHOBP62745 196 aa9.42□□□□□ -0.9
PTPRR-209ENST00000549308 SPSB3Q6PJ21 355 aa9.42□□□□□ -0.9
PTPRR-209ENST00000549308 OR1L4Q8NGR5 311 aa9.42□□□□□ -0.9
PTPRR-209ENST00000549308 LYPD6BQ8NI32 183 aa9.42□□□□□ -0.9
PTPRR-209ENST00000549308 RAB24Q969Q5 203 aa9.42□□□□□ -0.9
PTPRR-209ENST00000549308 MAP1LC3BQ9GZQ8 125 aa9.42□□□□□ -0.9
PTPRR-209ENST00000549308 DOK5Q9P104 306 aa9.42□□□□□ -0.9
PTPRR-209ENST00000549308 ZANQ9Y493 2812 aa9.42□□□□□ -0.9
PTPRR-209ENST00000549308 MYO9AB2RTY4 2548 aa9.42□□□□□ -0.9
PTPRR-209ENST00000549308 OR2T8A6NH00 312 aa9.42□□□□□ -0.9
PTPRR-209ENST00000549308 SEC14L6B5MCN3 397 aa9.42□□□□□ -0.9
PTPRR-209ENST00000549308 HMGB3O15347 200 aaKnown RBP9.42□□□□□ -0.9
PTPRR-209ENST00000549308 FGF8P55075 233 aaPredicted RBP9.42□□□□□ -0.9
PTPRR-209ENST00000549308 COMMD1Q8N668 190 aa9.42□□□□□ -0.9
PTPRR-209ENST00000549308 ZNF502Q8TBZ5 544 aa9.42□□□□□ -0.9
PTPRR-209ENST00000549308 ESM1Q9NQ30 184 aa9.42□□□□□ -0.9
PTPRR-209ENST00000549308 AKAP9Q99996 3911 aa9.41□□□□□ -0.9
PTPRR-209ENST00000549308 TRBV7-1A0A0A6YYK4 115 aa9.41□□□□□ -0.9
PTPRR-209ENST00000549308 F8W735 103 aaPredicted RBP9.41□□□□□ -0.9
PTPRR-209ENST00000549308 BRI3O95415 125 aa9.41□□□□□ -0.9
PTPRR-209ENST00000549308 IGKV1-17P01599 117 aa9.41□□□□□ -0.9
PTPRR-209ENST00000549308 FCGR2BP31994 310 aaPredicted RBP9.41□□□□□ -0.9
PTPRR-209ENST00000549308 CCL20P78556 96 aa9.41□□□□□ -0.9
PTPRR-209ENST00000549308 CFHR3Q02985 330 aa9.41□□□□□ -0.9
PTPRR-209ENST00000549308 FAM78BQ5VT40 261 aa9.41□□□□□ -0.9
PTPRR-209ENST00000549308 PFDN5Q99471 154 aa9.41□□□□□ -0.9
PTPRR-209ENST00000549308 RNF2Q99496 336 aa9.41□□□□□ -0.9
PTPRR-209ENST00000549308 C19orf24Q9BVV8 132 aa9.41□□□□□ -0.9
PTPRR-209ENST00000549308 GAR1Q9NY12 217 aaKnown RBP9.41□□□□□ -0.9
PTPRR-209ENST00000549308 FUT9Q9Y231 359 aa9.41□□□□□ -0.9
PTPRR-209ENST00000549308 SVEP1Q4LDE5 3571 aa9.41□□□□□ -0.9
PTPRR-209ENST00000549308 ZNF469Q96JG9 3925 aaPredicted RBP9.4□□□□□ -0.9
PTPRR-209ENST00000549308 TRAV1-1A0A0B4J248 108 aa9.4□□□□□ -0.9
PTPRR-209ENST00000549308 RAB19A4D1S5 217 aa9.4□□□□□ -0.9
PTPRR-209ENST00000549308 FAM181BA6NEQ2 426 aa9.4□□□□□ -0.9
PTPRR-209ENST00000549308 INAFM1C9JVW0 142 aa9.4□□□□□ -0.9
PTPRR-209ENST00000549308 TOMM40O96008 361 aa9.4□□□□□ -0.9
PTPRR-209ENST00000549308 IGLV1-40P01703 118 aa9.4□□□□□ -0.9
PTPRR-209ENST00000549308 CRYBA1P05813 215 aa9.4□□□□□ -0.9
PTPRR-209ENST00000549308 OR5G3P0C626 314 aa9.4□□□□□ -0.9
PTPRR-209ENST00000549308 RD3LP0DJH9 198 aa9.4□□□□□ -0.9
PTPRR-209ENST00000549308 PSG1P11464 419 aa9.4□□□□□ -0.9
PTPRR-209ENST00000549308 ORM2P19652 201 aa9.4□□□□□ -0.9
PTPRR-209ENST00000549308 GPR183P32249 361 aa9.4□□□□□ -0.9
PTPRR-209ENST00000549308 YPEL3P61236 119 aaPredicted RBP9.4□□□□□ -0.9
PTPRR-209ENST00000549308 LYZP61626 148 aa9.4□□□□□ -0.9
PTPRR-209ENST00000549308 SLC35B1P78383 322 aa9.4□□□□□ -0.9
PTPRR-209ENST00000549308 C10orf113Q5VZT2 155 aa9.4□□□□□ -0.9
PTPRR-209ENST00000549308 SPATA31B1PQ5VZV4 182 aa9.4□□□□□ -0.9
PTPRR-209ENST00000549308 ZNF329Q86UD4 541 aa9.4□□□□□ -0.9
PTPRR-209ENST00000549308 IQCF2Q8IXL9 164 aa9.4□□□□□ -0.9
PTPRR-209ENST00000549308 Q8N2B8 174 aa9.4□□□□□ -0.9
PTPRR-209ENST00000549308 OR1B1Q8NGR6 318 aa9.4□□□□□ -0.9
PTPRR-209ENST00000549308 GATAD1Q8WUU5 269 aa9.4□□□□□ -0.9
PTPRR-209ENST00000549308 USMG5Q96IX5 58 aa9.4□□□□□ -0.9
PTPRR-209ENST00000549308 DNAJC4Q9NNZ3 241 aa9.4□□□□□ -0.9
PTPRR-209ENST00000549308 PSMB11A5LHX3 300 aa9.39□□□□□ -0.91
PTPRR-209ENST00000549308 CLDN34H7C241 214 aa9.39□□□□□ -0.91
PTPRR-209ENST00000549308 NUPL2O15504 423 aaKnown RBP9.39□□□□□ -0.91
PTPRR-209ENST00000549308 HYPMO75409 117 aa9.39□□□□□ -0.91
PTPRR-209ENST00000549308 IGHG4P01861 327 aa9.39□□□□□ -0.91
PTPRR-209ENST00000549308 CLEC19AQ6UXS0 136 aa9.39□□□□□ -0.91
PTPRR-209ENST00000549308 OR51G1Q8NGK1 321 aa9.39□□□□□ -0.91
PTPRR-209ENST00000549308 Q8WTZ3 238 aa9.39□□□□□ -0.91
PTPRR-209ENST00000549308 TMEM37Q8WXS4 190 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms