RNA–Protein interactions for RNA: ENST00000547392.5

CACNB3-205, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5 BASIC

Gene CACNB3, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-205ENST00000547392 GNB4Q9HAV0 340 aa17.36■□□□□ 0.37
CACNB3-205ENST00000547392 TPSG1Q9NRR2 321 aa17.36■□□□□ 0.37
CACNB3-205ENST00000547392 CRYGBP07316 175 aa17.36■□□□□ 0.37
CACNB3-205ENST00000547392 FOXC1Q12948 553 aa17.36■□□□□ 0.37
CACNB3-205ENST00000547392 RASL11AQ6T310 242 aa17.36■□□□□ 0.37
CACNB3-205ENST00000547392 TRGV9Q99603 122 aa17.36■□□□□ 0.37
CACNB3-205ENST00000547392 SNRPCP09234 159 aaKnown RBP17.35■□□□□ 0.37
CACNB3-205ENST00000547392 TEX43Q6ZNM6 134 aa17.35■□□□□ 0.37
CACNB3-205ENST00000547392 HSPB9Q9BQS6 159 aa17.35■□□□□ 0.37
CACNB3-205ENST00000547392 SH3BGRL2Q9UJC5 107 aa17.35■□□□□ 0.37
CACNB3-205ENST00000547392 RP1L1Q8IWN7 2480 aaPredicted RBP17.35■□□□□ 0.37
CACNB3-205ENST00000547392 ZNF705FA8MVS1 300 aaPredicted RBP17.35■□□□□ 0.37
CACNB3-205ENST00000547392 F2Z2F3 143 aa17.35■□□□□ 0.37
CACNB3-205ENST00000547392 ZNF705DP0CH99 300 aaPredicted RBP17.35■□□□□ 0.37
CACNB3-205ENST00000547392 ZNF705BP0CI00 300 aaPredicted RBP17.35■□□□□ 0.37
CACNB3-205ENST00000547392 TPTE2P1Q5T6R2 138 aa17.35■□□□□ 0.37
CACNB3-205ENST00000547392 WIPF2Q8TF74 440 aaPredicted RBP17.35■□□□□ 0.37
CACNB3-205ENST00000547392 ZZEF1O43149 2961 aa17.34■□□□□ 0.37
CACNB3-205ENST00000547392 IGHV1-69-2A0A0G2JMI3 117 aa17.34■□□□□ 0.37
CACNB3-205ENST00000547392 PERPQ96FX8 193 aa17.34■□□□□ 0.37
CACNB3-205ENST00000547392 C22orf46C9J442 243 aa17.33■□□□□ 0.37
CACNB3-205ENST00000547392 BRS3P32247 399 aa17.33■□□□□ 0.37
CACNB3-205ENST00000547392 TCL1AP56279 114 aa17.33■□□□□ 0.37
CACNB3-205ENST00000547392 LINC00305Q7Z4B0 112 aa17.33■□□□□ 0.37
CACNB3-205ENST00000547392 LINC00479Q96M42 142 aa17.33■□□□□ 0.37
CACNB3-205ENST00000547392 TNFRSF19Q9NS68 423 aa17.33■□□□□ 0.37
CACNB3-205ENST00000547392 SERTAD4Q9NUC0 356 aa17.33■□□□□ 0.37
CACNB3-205ENST00000547392 APOBEC3AP31941 199 aaPredicted RBP17.33■□□□□ 0.36
CACNB3-205ENST00000547392 RPL27AP46776 148 aaKnown RBP17.33■□□□□ 0.36
CACNB3-205ENST00000547392 GRAMD2BQ96HH9 432 aa17.33■□□□□ 0.36
CACNB3-205ENST00000547392 CHRDL1Q9BU40 450 aa17.33■□□□□ 0.36
CACNB3-205ENST00000547392 B9A039 149 aa17.32■□□□□ 0.36
CACNB3-205ENST00000547392 ENSAO43768 121 aaKnown RBP17.32■□□□□ 0.36
CACNB3-205ENST00000547392 SPINK4O60575 86 aa17.32■□□□□ 0.36
CACNB3-205ENST00000547392 IGHV3-48P01763 117 aa17.32■□□□□ 0.36
CACNB3-205ENST00000547392 GPX1P07203 203 aa17.32■□□□□ 0.36
CACNB3-205ENST00000547392 TMEM183BQ1AE95 376 aa17.32■□□□□ 0.36
CACNB3-205ENST00000547392 TMEM116Q8NCL8 245 aa17.32■□□□□ 0.36
CACNB3-205ENST00000547392 SMIM12Q96EX1 92 aa17.32■□□□□ 0.36
CACNB3-205ENST00000547392 C20orf144Q9BQM9 153 aa17.32■□□□□ 0.36
CACNB3-205ENST00000547392 SAMD10Q9BYL1 202 aa17.32■□□□□ 0.36
CACNB3-205ENST00000547392 BMPR1BO00238 502 aa17.32■□□□□ 0.36
CACNB3-205ENST00000547392 IGLV1-47P01700 117 aa17.32■□□□□ 0.36
CACNB3-205ENST00000547392 REG1AP05451 166 aa17.32■□□□□ 0.36
CACNB3-205ENST00000547392 PRRX1P54821 245 aa17.32■□□□□ 0.36
CACNB3-205ENST00000547392 MFAP2P55001 183 aa17.32■□□□□ 0.36
CACNB3-205ENST00000547392 CASP6P55212 293 aa17.32■□□□□ 0.36
CACNB3-205ENST00000547392 SCNM1Q9BWG6 230 aa17.32■□□□□ 0.36
CACNB3-205ENST00000547392 SMG1Q96Q15 3661 aaKnown RBP17.32■□□□□ 0.36
CACNB3-205ENST00000547392 FAM168AQ92567 244 aa17.31■□□□□ 0.36
CACNB3-205ENST00000547392 RALYQ9UKM9 306 aaKnown RBP17.31■□□□□ 0.36
CACNB3-205ENST00000547392 SPTBN4Q9H254 2564 aa17.31■□□□□ 0.36
CACNB3-205ENST00000547392 IGHV2-26A0A0B4J1V2 119 aa17.31■□□□□ 0.36
CACNB3-205ENST00000547392 CORTO00230 105 aa17.31■□□□□ 0.36
CACNB3-205ENST00000547392 PLP1P60201 277 aa17.31■□□□□ 0.36
CACNB3-205ENST00000547392 SLC35B1P78383 322 aa17.31■□□□□ 0.36
CACNB3-205ENST00000547392 MRPL54Q6P161 138 aaKnown RBP17.31■□□□□ 0.36
CACNB3-205ENST00000547392 TOMM20LQ6UXN7 152 aa17.31■□□□□ 0.36
CACNB3-205ENST00000547392 SIGLECL1Q8N7X8 197 aa17.31■□□□□ 0.36
CACNB3-205ENST00000547392 NHLRC2Q8NBF2 726 aa17.31■□□□□ 0.36
CACNB3-205ENST00000547392 C22orf15Q8WYQ4 148 aa17.31■□□□□ 0.36
CACNB3-205ENST00000547392 C7orf69Q9H7B7 122 aa17.31■□□□□ 0.36
CACNB3-205ENST00000547392 EPDR1Q9UM22 224 aa17.31■□□□□ 0.36
CACNB3-205ENST00000547392 KLF12Q9Y4X4 402 aa17.31■□□□□ 0.36
CACNB3-205ENST00000547392 USF2Q15853 346 aaPredicted RBP17.3■□□□□ 0.36
CACNB3-205ENST00000547392 TBR1Q16650 682 aa17.3■□□□□ 0.36
CACNB3-205ENST00000547392 NUDT10Q8NFP7 164 aa17.3■□□□□ 0.36
CACNB3-205ENST00000547392 NUDT11Q96G61 164 aa17.3■□□□□ 0.36
CACNB3-205ENST00000547392 ZNF331Q9NQX6 463 aaPredicted RBP17.3■□□□□ 0.36
CACNB3-205ENST00000547392 SIGLEC9Q9Y336 463 aa17.3■□□□□ 0.36
CACNB3-205ENST00000547392 ARFGEF3Q5TH69 2177 aa17.3■□□□□ 0.36
CACNB3-205ENST00000547392 NAV3Q8IVL0 2385 aa17.3■□□□□ 0.36
CACNB3-205ENST00000547392 IGHV3-72A0A0B4J1Y9 119 aa17.29■□□□□ 0.36
CACNB3-205ENST00000547392 CD33P20138 364 aa17.29■□□□□ 0.36
CACNB3-205ENST00000547392 COMPP49747 757 aaPredicted RBP17.29■□□□□ 0.36
CACNB3-205ENST00000547392 HCP5Q6MZN7 132 aa17.29■□□□□ 0.36
CACNB3-205ENST00000547392 KCNS1Q96KK3 526 aa17.29■□□□□ 0.36
CACNB3-205ENST00000547392 EREGO14944 169 aa17.29■□□□□ 0.36
CACNB3-205ENST00000547392 APCSP02743 223 aa17.29■□□□□ 0.36
CACNB3-205ENST00000547392 TNXAQ16473 311 aa17.29■□□□□ 0.36
CACNB3-205ENST00000547392 RUSC1-AS1Q66K80 236 aa17.29■□□□□ 0.36
CACNB3-205ENST00000547392 RELNP78509 3460 aa17.28■□□□□ 0.36
CACNB3-205ENST00000547392 TRAV34A0A0B4J273 112 aa17.28■□□□□ 0.36
CACNB3-205ENST00000547392 MOSP00540 346 aa17.28■□□□□ 0.36
CACNB3-205ENST00000547392 RBP4P02753 201 aa17.28■□□□□ 0.36
CACNB3-205ENST00000547392 CDKN1AP38936 164 aa17.28■□□□□ 0.36
CACNB3-205ENST00000547392 RBPJQ06330 500 aa17.28■□□□□ 0.36
CACNB3-205ENST00000547392 KIAA1644Q3SXP7 199 aa17.28■□□□□ 0.36
CACNB3-205ENST00000547392 MRPL52Q86TS9 123 aaKnown RBP17.28■□□□□ 0.36
CACNB3-205ENST00000547392 CA1P00915 261 aaPredicted RBP17.28■□□□□ 0.36
CACNB3-205ENST00000547392 CD3EP07766 207 aa17.28■□□□□ 0.36
CACNB3-205ENST00000547392 RNF224P0DH78 156 aa17.28■□□□□ 0.36
CACNB3-205ENST00000547392 ORM2P19652 201 aa17.28■□□□□ 0.36
CACNB3-205ENST00000547392 SRIP30626 198 aa17.28■□□□□ 0.36
CACNB3-205ENST00000547392 ZNF841Q6ZN19 808 aa17.28■□□□□ 0.36
CACNB3-205ENST00000547392 OR1B1Q8NGR6 318 aa17.28■□□□□ 0.36
CACNB3-205ENST00000547392 ZNF586Q9NXT0 402 aa17.28■□□□□ 0.36
CACNB3-205ENST00000547392 IGHV1-3A0A0C4DH29 117 aa17.27■□□□□ 0.36
CACNB3-205ENST00000547392 A0A1W2PS18 150 aa17.27■□□□□ 0.36
CACNB3-205ENST00000547392 BUB1B-PAK6H3BSN5 160 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms