RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 EPDR1Q9UM22 224 aa0.47□□□□□ -2.33
CCDC38-204ENST00000546816 MED12LQ86YW9 2145 aa0.47□□□□□ -2.33
CCDC38-204ENST00000546816 EXPH5Q8NEV8 1989 aa0.46□□□□□ -2.34
CCDC38-204ENST00000546816 TRBV6-8A0A0A6YYG3 113 aa0.46□□□□□ -2.34
CCDC38-204ENST00000546816 hADV38S2A0JD32 116 aa0.46□□□□□ -2.34
CCDC38-204ENST00000546816 SMIM9A6NGZ8 99 aa0.46□□□□□ -2.34
CCDC38-204ENST00000546816 RPP14O95059 124 aaKnown RBP0.46□□□□□ -2.34
CCDC38-204ENST00000546816 RPS17P08708 135 aaKnown RBP0.46□□□□□ -2.34
CCDC38-204ENST00000546816 OR4E1P0C645 316 aa0.46□□□□□ -2.34
CCDC38-204ENST00000546816 MGST1P10620 155 aaKnown RBP0.46□□□□□ -2.34
CCDC38-204ENST00000546816 CEBPGP53567 150 aa0.46□□□□□ -2.34
CCDC38-204ENST00000546816 YPEL3P61236 119 aaPredicted RBP0.46□□□□□ -2.34
CCDC38-204ENST00000546816 AESQ08117 197 aa0.46□□□□□ -2.34
CCDC38-204ENST00000546816 EDDM3AQ14507 147 aa0.46□□□□□ -2.34
CCDC38-204ENST00000546816 C1orf137Q5JT78 98 aa0.46□□□□□ -2.34
CCDC38-204ENST00000546816 KRT222Q8N1A0 295 aa0.46□□□□□ -2.34
CCDC38-204ENST00000546816 C3orf56Q8N813 242 aa0.46□□□□□ -2.34
CCDC38-204ENST00000546816 ADAT3Q96EY9 351 aaPredicted RBP0.46□□□□□ -2.34
CCDC38-204ENST00000546816 C2orf50Q96LR7 162 aa0.46□□□□□ -2.34
CCDC38-204ENST00000546816 CMSS1Q9BQ75 279 aaKnown RBP0.46□□□□□ -2.34
CCDC38-204ENST00000546816 CCDC90BQ9GZT6 254 aa0.46□□□□□ -2.34
CCDC38-204ENST00000546816 RNASE7Q9H1E1 156 aaKnown RBP0.46□□□□□ -2.34
CCDC38-204ENST00000546816 CYSLTR1Q9Y271 337 aa0.46□□□□□ -2.34
CCDC38-204ENST00000546816 ZFYVE9O95405 1425 aa0.46□□□□□ -2.34
CCDC38-204ENST00000546816 NCOA1Q15788 1441 aa0.46□□□□□ -2.34
CCDC38-204ENST00000546816 MED1Q15648 1581 aaPredicted RBP0.45□□□□□ -2.34
CCDC38-204ENST00000546816 C7orf71A4D174 169 aa0.45□□□□□ -2.34
CCDC38-204ENST00000546816 SULT1B1O43704 296 aa0.45□□□□□ -2.34
CCDC38-204ENST00000546816 HAND1O96004 215 aa0.45□□□□□ -2.34
CCDC38-204ENST00000546816 HIST1H3AP68431 136 aa0.45□□□□□ -2.34
CCDC38-204ENST00000546816 H3F3AP84243 136 aa0.45□□□□□ -2.34
CCDC38-204ENST00000546816 ITGB3BPQ13352 177 aaPredicted RBP0.45□□□□□ -2.34
CCDC38-204ENST00000546816 DEFB113Q30KQ7 82 aa0.45□□□□□ -2.34
CCDC38-204ENST00000546816 GDF5OSQ5U4N7 250 aa0.45□□□□□ -2.34
CCDC38-204ENST00000546816 LCA10Q71F78 164 aa0.45□□□□□ -2.34
CCDC38-204ENST00000546816 WFDC5Q8TCV5 224 aa0.45□□□□□ -2.34
CCDC38-204ENST00000546816 TMEM133Q9H2Q1 129 aa0.45□□□□□ -2.34
CCDC38-204ENST00000546816 C14orf105Q9NVL8 296 aa0.45□□□□□ -2.34
CCDC38-204ENST00000546816 IDI2-AS1Q9NZ38 188 aa0.45□□□□□ -2.34
CCDC38-204ENST00000546816 SLC35A3Q9Y2D2 325 aa0.45□□□□□ -2.34
CCDC38-204ENST00000546816 PRELID3BQ9Y3B1 194 aa0.45□□□□□ -2.34
CCDC38-204ENST00000546816 NCOA6Q14686 2063 aaPredicted RBP0.45□□□□□ -2.34
CCDC38-204ENST00000546816 PIK3C2GO75747 1445 aa0.45□□□□□ -2.34
CCDC38-204ENST00000546816 DOCK5Q9H7D0 1870 aa0.44□□□□□ -2.34
CCDC38-204ENST00000546816 hCG_1818297A0A087WSY0 165 aa0.44□□□□□ -2.34
CCDC38-204ENST00000546816 A0A087X0T9 212 aa0.44□□□□□ -2.34
CCDC38-204ENST00000546816 TRAV3A0A0B4J244 114 aa0.44□□□□□ -2.34
CCDC38-204ENST00000546816 A8MT66 165 aa0.44□□□□□ -2.34
CCDC38-204ENST00000546816 PROSCO94903 275 aa0.44□□□□□ -2.34
CCDC38-204ENST00000546816 SERPINE1P05121 402 aa0.44□□□□□ -2.34
CCDC38-204ENST00000546816 C8GP07360 202 aa0.44□□□□□ -2.34
CCDC38-204ENST00000546816 PPIBP23284 216 aaKnown RBP0.44□□□□□ -2.34
CCDC38-204ENST00000546816 CASP1P29466 404 aa0.44□□□□□ -2.34
CCDC38-204ENST00000546816 SRSF6Q13247 344 aaKnown RBP0.44□□□□□ -2.34
CCDC38-204ENST00000546816 TSNQ15631 228 aaKnown RBP0.44□□□□□ -2.34
CCDC38-204ENST00000546816 ESRGQ1W209 222 aa0.44□□□□□ -2.34
CCDC38-204ENST00000546816 TMEM97Q5BJF2 176 aa0.44□□□□□ -2.34
CCDC38-204ENST00000546816 BRMS1LQ5PSV4 323 aa0.44□□□□□ -2.34
CCDC38-204ENST00000546816 Q6Q795 121 aa0.44□□□□□ -2.34
CCDC38-204ENST00000546816 OR52L1Q8NGH7 329 aa0.44□□□□□ -2.34
CCDC38-204ENST00000546816 PRAP1Q96NZ9 151 aa0.44□□□□□ -2.34
CCDC38-204ENST00000546816 TRIM4Q9C037 500 aa0.44□□□□□ -2.34
CCDC38-204ENST00000546816 OR51V1Q9H2C8 321 aa0.44□□□□□ -2.34
CCDC38-204ENST00000546816 ACER3Q9NUN7 267 aa0.44□□□□□ -2.34
CCDC38-204ENST00000546816 UQCC1Q9NVA1 299 aa0.44□□□□□ -2.34
CCDC38-204ENST00000546816 RASL12Q9NYN1 266 aa0.44□□□□□ -2.34
CCDC38-204ENST00000546816 UBAP1Q9NZ09 502 aa0.44□□□□□ -2.34
CCDC38-204ENST00000546816 V9GYY5 206 aaPredicted RBP0.44□□□□□ -2.34
CCDC38-204ENST00000546816 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.43□□□□□ -2.34
CCDC38-204ENST00000546816 ZNF736B4DX44 427 aaPredicted RBP0.43□□□□□ -2.34
CCDC38-204ENST00000546816 PDE6DO43924 150 aa0.43□□□□□ -2.34
CCDC38-204ENST00000546816 CDKN2CP42773 168 aa0.43□□□□□ -2.34
CCDC38-204ENST00000546816 AP3S2P59780 193 aa0.43□□□□□ -2.34
CCDC38-204ENST00000546816 MYL6P60660 151 aa0.43□□□□□ -2.34
CCDC38-204ENST00000546816 CCL7P80098 99 aa0.43□□□□□ -2.34
CCDC38-204ENST00000546816 SOSTDC1Q6X4U4 206 aa0.43□□□□□ -2.34
CCDC38-204ENST00000546816 OR51A2Q8NGJ7 313 aa0.43□□□□□ -2.34
CCDC38-204ENST00000546816 OR8D4Q8NGM9 314 aa0.43□□□□□ -2.34
CCDC38-204ENST00000546816 HIST1H2BLQ99880 126 aa0.43□□□□□ -2.34
CCDC38-204ENST00000546816 TVP23BQ9NYZ1 205 aa0.43□□□□□ -2.34
CCDC38-204ENST00000546816 GLTPQ9NZD2 209 aa0.43□□□□□ -2.34
CCDC38-204ENST00000546816 CCDC144AA2RUR9 1427 aa0.43□□□□□ -2.34
CCDC38-204ENST00000546816 MUC5ACP98088 5654 aa0.43□□□□□ -2.34
CCDC38-204ENST00000546816 SBF1O95248 1867 aa0.43□□□□□ -2.34
CCDC38-204ENST00000546816 RTL1A6NKG5 1358 aa0.43□□□□□ -2.34
CCDC38-204ENST00000546816 MYO3BQ8WXR4 1341 aa0.42□□□□□ -2.34
CCDC38-204ENST00000546816 J3QRK9 145 aa0.42□□□□□ -2.34
CCDC38-204ENST00000546816 SMIM17P0DL12 118 aa0.42□□□□□ -2.34
CCDC38-204ENST00000546816 SRIP30626 198 aa0.42□□□□□ -2.34
CCDC38-204ENST00000546816 RNASE4P34096 147 aaKnown RBP0.42□□□□□ -2.34
CCDC38-204ENST00000546816 MPV17LQ2QL34 196 aa0.42□□□□□ -2.34
CCDC38-204ENST00000546816 SLC25A40Q8TBP6 338 aa0.42□□□□□ -2.34
CCDC38-204ENST00000546816 TEX47Q8TBZ9 253 aa0.42□□□□□ -2.34
CCDC38-204ENST00000546816 C4orf3Q8WVX3 66 aa0.42□□□□□ -2.34
CCDC38-204ENST00000546816 BCL2L10Q9HD36 194 aa0.42□□□□□ -2.34
CCDC38-204ENST00000546816 CDC42SE1Q9NRR8 79 aa0.42□□□□□ -2.34
CCDC38-204ENST00000546816 FBXO5Q9UKT4 447 aa0.42□□□□□ -2.34
CCDC38-204ENST00000546816 SLC22A13Q9Y226 551 aa0.42□□□□□ -2.34
CCDC38-204ENST00000546816 UTP11Q9Y3A2 253 aaKnown RBP0.42□□□□□ -2.34
CCDC38-204ENST00000546816 ZNF106Q9H2Y7 1883 aaKnown RBP0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms