RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 COMMD5Q9GZQ3 224 aa15.24■□□□□ 0.03
MSLN-202ENST00000545450 PLEKHA3Q9HB20 300 aa15.24■□□□□ 0.03
MSLN-202ENST00000545450 C17orf100A8MU93 164 aa15.24■□□□□ 0.03
MSLN-202ENST00000545450 SAA2P0DJI9 122 aaPredicted RBP15.24■□□□□ 0.03
MSLN-202ENST00000545450 MGST1P10620 155 aaKnown RBP15.24■□□□□ 0.03
MSLN-202ENST00000545450 CCL8P80075 99 aa15.24■□□□□ 0.03
MSLN-202ENST00000545450 SLAQ13239 276 aa15.24■□□□□ 0.03
MSLN-202ENST00000545450 SERTAD4Q9NUC0 356 aa15.24■□□□□ 0.03
MSLN-202ENST00000545450 MRPS16Q9Y3D3 137 aaKnown RBP15.24■□□□□ 0.03
MSLN-202ENST00000545450 USF1P22415 310 aaPredicted RBP15.23■□□□□ 0.03
MSLN-202ENST00000545450 PMCHL1Q16048 86 aa15.23■□□□□ 0.03
MSLN-202ENST00000545450 LEAP2Q969E1 77 aa15.23■□□□□ 0.03
MSLN-202ENST00000545450 HINT2Q9BX68 163 aa15.23■□□□□ 0.03
MSLN-202ENST00000545450 CLEC7AQ9BXN2 247 aa15.23■□□□□ 0.03
MSLN-202ENST00000545450 ZNF331Q9NQX6 463 aaPredicted RBP15.23■□□□□ 0.03
MSLN-202ENST00000545450 RNF7Q9UBF6 113 aa15.23■□□□□ 0.03
MSLN-202ENST00000545450 PRNDQ9UKY0 176 aa15.23■□□□□ 0.03
MSLN-202ENST00000545450 ZNF257Q9Y2Q1 563 aa15.23■□□□□ 0.03
MSLN-202ENST00000545450 DSCAML1Q8TD84 2053 aa15.23■□□□□ 0.03
MSLN-202ENST00000545450 GATA2P23769 480 aaPredicted RBP15.22■□□□□ 0.03
MSLN-202ENST00000545450 TSPOP30536 169 aa15.22■□□□□ 0.03
MSLN-202ENST00000545450 PRCDQ00LT1 54 aa15.22■□□□□ 0.03
MSLN-202ENST00000545450 C17orf58Q2M2W7 97 aa15.22■□□□□ 0.03
MSLN-202ENST00000545450 STUMQ69YW2 141 aa15.22■□□□□ 0.03
MSLN-202ENST00000545450 ZNRF1Q8ND25 227 aa15.22■□□□□ 0.03
MSLN-202ENST00000545450 SLC25A33Q9BSK2 321 aa15.22■□□□□ 0.03
MSLN-202ENST00000545450 C20orf202A1L168 122 aa15.22■□□□□ 0.03
MSLN-202ENST00000545450 J3QR06 171 aa15.22■□□□□ 0.03
MSLN-202ENST00000545450 PLAUP00749 431 aa15.22■□□□□ 0.03
MSLN-202ENST00000545450 C8orf88P0DMB2 117 aa15.22■□□□□ 0.03
MSLN-202ENST00000545450 FAM222BQ8WU58 562 aa15.22■□□□□ 0.03
MSLN-202ENST00000545450 FAM168AQ92567 244 aa15.22■□□□□ 0.03
MSLN-202ENST00000545450 ADTRPQ96IZ2 230 aa15.22■□□□□ 0.03
MSLN-202ENST00000545450 CA1P00915 261 aaPredicted RBP15.21■□□□□ 0.03
MSLN-202ENST00000545450 CD3EP07766 207 aa15.21■□□□□ 0.03
MSLN-202ENST00000545450 NTF3P20783 257 aa15.21■□□□□ 0.03
MSLN-202ENST00000545450 MBD6Q96DN6 1003 aa15.21■□□□□ 0.03
MSLN-202ENST00000545450 PCP4P48539 62 aa15.21■□□□□ 0.02
MSLN-202ENST00000545450 ATP5IP56385 69 aaPredicted RBP15.21■□□□□ 0.02
MSLN-202ENST00000545450 NCOR1P1Q9H4R4 102 aa15.21■□□□□ 0.02
MSLN-202ENST00000545450 TANC2Q9HCD6 1990 aa15.21■□□□□ 0.02
MSLN-202ENST00000545450 SPTBN1Q01082 2364 aaKnown RBP15.2■□□□□ 0.02
MSLN-202ENST00000545450 UPK2O00526 184 aa15.2■□□□□ 0.02
MSLN-202ENST00000545450 CCL25O15444 150 aa15.2■□□□□ 0.02
MSLN-202ENST00000545450 TNXAQ16473 311 aa15.2■□□□□ 0.02
MSLN-202ENST00000545450 MAJINQ3KP22 176 aa15.2■□□□□ 0.02
MSLN-202ENST00000545450 C2orf83Q53S99 150 aa15.2■□□□□ 0.02
MSLN-202ENST00000545450 LCN12Q6JVE5 192 aa15.2■□□□□ 0.02
MSLN-202ENST00000545450 FAM231DQ6ZW35 169 aa15.2■□□□□ 0.02
MSLN-202ENST00000545450 ATOH7Q8N100 152 aa15.2■□□□□ 0.02
MSLN-202ENST00000545450 OR5B3Q8NH48 314 aa15.2■□□□□ 0.02
MSLN-202ENST00000545450 YLPM1P49750 1951 aaKnown RBP15.2■□□□□ 0.02
MSLN-202ENST00000545450 ABCA4P78363 2273 aa15.2■□□□□ 0.02
MSLN-202ENST00000545450 IGHV2-26A0A0B4J1V2 119 aa15.19■□□□□ 0.02
MSLN-202ENST00000545450 KLF5Q13887 457 aaPredicted RBP15.19■□□□□ 0.02
MSLN-202ENST00000545450 DUX4L9Q6RFH8 374 aaPredicted RBP15.19■□□□□ 0.02
MSLN-202ENST00000545450 FAM167A-AS1Q96KT0 104 aa15.19■□□□□ 0.02
MSLN-202ENST00000545450 MRPL32Q9BYC8 188 aaKnown RBP15.19■□□□□ 0.02
MSLN-202ENST00000545450 LRBAP50851 2863 aa15.19■□□□□ 0.02
MSLN-202ENST00000545450 TRAV34A0A0B4J273 112 aa15.19■□□□□ 0.02
MSLN-202ENST00000545450 KBTBD11-OT1A0A1B0GTJ5 212 aa15.19■□□□□ 0.02
MSLN-202ENST00000545450 TOMM40O96008 361 aa15.19■□□□□ 0.02
MSLN-202ENST00000545450 GDF5OSQ5U4N7 250 aa15.19■□□□□ 0.02
MSLN-202ENST00000545450 OR9G1Q8NH87 305 aa15.19■□□□□ 0.02
MSLN-202ENST00000545450 RAB9BQ9NP90 201 aa15.19■□□□□ 0.02
MSLN-202ENST00000545450 PSMB11A5LHX3 300 aa15.18■□□□□ 0.02
MSLN-202ENST00000545450 VSTM5A8MXK1 200 aa15.18■□□□□ 0.02
MSLN-202ENST00000545450 TNFRSF1AP19438 455 aa15.18■□□□□ 0.02
MSLN-202ENST00000545450 C21orf62-AS1Q17RA5 79 aa15.18■□□□□ 0.02
MSLN-202ENST00000545450 NHLRC2Q8NBF2 726 aa15.18■□□□□ 0.02
MSLN-202ENST00000545450 DEFB108BQ8NET1 73 aa15.18■□□□□ 0.02
MSLN-202ENST00000545450 LINC00479Q96M42 142 aa15.18■□□□□ 0.02
MSLN-202ENST00000545450 SSBP3Q9BWW4 388 aaPredicted RBP15.18■□□□□ 0.02
MSLN-202ENST00000545450 SLC25A2Q9BXI2 301 aa15.18■□□□□ 0.02
MSLN-202ENST00000545450 IGSF10Q6WRI0 2623 aa15.18■□□□□ 0.02
MSLN-202ENST00000545450 TRAV9-2A0A087WT02 112 aa15.18■□□□□ 0.02
MSLN-202ENST00000545450 TEX50A0A1B0GTY4 177 aa15.18■□□□□ 0.02
MSLN-202ENST00000545450 FAM181BA6NEQ2 426 aa15.18■□□□□ 0.02
MSLN-202ENST00000545450 UQCRFS1P47985 274 aa15.18■□□□□ 0.02
MSLN-202ENST00000545450 PTTG1IPP53801 180 aa15.18■□□□□ 0.02
MSLN-202ENST00000545450 MFAP2P55001 183 aa15.18■□□□□ 0.02
MSLN-202ENST00000545450 MLANAQ16655 118 aa15.18■□□□□ 0.02
MSLN-202ENST00000545450 LYG1Q8N1E2 194 aa15.18■□□□□ 0.02
MSLN-202ENST00000545450 OR8B3Q8NGG8 313 aa15.18■□□□□ 0.02
MSLN-202ENST00000545450 OR8B2Q96RD0 313 aa15.18■□□□□ 0.02
MSLN-202ENST00000545450 SAP30LQ9HAJ7 183 aa15.18■□□□□ 0.02
MSLN-202ENST00000545450 BET1LQ9NYM9 111 aa15.18■□□□□ 0.02
MSLN-202ENST00000545450 CFAP46Q8IYW2 2715 aa15.17■□□□□ 0.02
MSLN-202ENST00000545450 HSBP1O75506 76 aa15.17■□□□□ 0.02
MSLN-202ENST00000545450 RNASE2P10153 161 aaKnown RBP15.17■□□□□ 0.02
MSLN-202ENST00000545450 APOBEC3AP31941 199 aaPredicted RBP15.17■□□□□ 0.02
MSLN-202ENST00000545450 HINT1P49773 126 aaPredicted RBP15.17■□□□□ 0.02
MSLN-202ENST00000545450 MORN5Q5VZ52 161 aa15.17■□□□□ 0.02
MSLN-202ENST00000545450 EBLN2Q6P2I7 272 aa15.17■□□□□ 0.02
MSLN-202ENST00000545450 NUP35Q8NFH5 326 aa15.17■□□□□ 0.02
MSLN-202ENST00000545450 OR1L8Q8NGR8 309 aa15.17■□□□□ 0.02
MSLN-202ENST00000545450 GRAMD2BQ96HH9 432 aa15.17■□□□□ 0.02
MSLN-202ENST00000545450 HRNRQ86YZ3 2850 aaPredicted RBP15.17■□□□□ 0.02
MSLN-202ENST00000545450 NKX6-3A6NJ46 265 aa15.17■□□□□ 0.02
MSLN-202ENST00000545450 SRRM4A7MD48 611 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms