RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 YPEL3P61236 119 aaPredicted RBP8.5□□□□□ -1.05
YBX3-216ENST00000544622 ID3Q02535 119 aa8.5□□□□□ -1.05
YBX3-216ENST00000544622 CNPY1Q3B7I2 92 aa8.5□□□□□ -1.05
YBX3-216ENST00000544622 ODF3L2Q3SX64 289 aa8.5□□□□□ -1.05
YBX3-216ENST00000544622 GGNBP1Q5YKI7 109 aa8.5□□□□□ -1.05
YBX3-216ENST00000544622 ETFRF1Q6IPR1 90 aa8.5□□□□□ -1.05
YBX3-216ENST00000544622 OR1S1Q8NH92 325 aa8.5□□□□□ -1.05
YBX3-216ENST00000544622 GINS3Q9BRX5 216 aa8.5□□□□□ -1.05
YBX3-216ENST00000544622 CCDC32Q9BV29 185 aa8.5□□□□□ -1.05
YBX3-216ENST00000544622 SRD5A3Q9H8P0 318 aa8.5□□□□□ -1.05
YBX3-216ENST00000544622 U3KQE9 123 aa8.5□□□□□ -1.05
YBX3-216ENST00000544622 IGHV3-49A0A0A0MS15 119 aa8.49□□□□□ -1.05
YBX3-216ENST00000544622 MPTX1A8MV57 137 aa8.49□□□□□ -1.05
YBX3-216ENST00000544622 PRSS46E5RG02 174 aa8.49□□□□□ -1.05
YBX3-216ENST00000544622 LYRM1O43325 122 aa8.49□□□□□ -1.05
YBX3-216ENST00000544622 ADAP1O75689 374 aa8.49□□□□□ -1.05
YBX3-216ENST00000544622 CD5P06127 495 aa8.49□□□□□ -1.05
YBX3-216ENST00000544622 ANXA7P20073 488 aaKnown RBP8.49□□□□□ -1.05
YBX3-216ENST00000544622 GPX4P36969 197 aaPredicted RBP8.49□□□□□ -1.05
YBX3-216ENST00000544622 RND2P52198 227 aa8.49□□□□□ -1.05
YBX3-216ENST00000544622 TIGITQ495A1 244 aa8.49□□□□□ -1.05
YBX3-216ENST00000544622 LYG2Q86SG7 212 aa8.49□□□□□ -1.05
YBX3-216ENST00000544622 OR1S2Q8NGQ3 325 aa8.49□□□□□ -1.05
YBX3-216ENST00000544622 ST8SIA2Q92186 375 aa8.49□□□□□ -1.05
YBX3-216ENST00000544622 NPIPB3Q92617 1050 aa8.49□□□□□ -1.05
YBX3-216ENST00000544622 SPATA25Q9BR10 227 aa8.49□□□□□ -1.05
YBX3-216ENST00000544622 EDA2RQ9HAV5 297 aa8.49□□□□□ -1.05
YBX3-216ENST00000544622 IGKV1D-37A0A075B6S9 117 aa8.48□□□□□ -1.05
YBX3-216ENST00000544622 IGHV3OR16-13A0A075B7E8 117 aa8.48□□□□□ -1.05
YBX3-216ENST00000544622 IGHV3-74A0A0B4J1X5 117 aa8.48□□□□□ -1.05
YBX3-216ENST00000544622 OR4C46A6NHA9 309 aa8.48□□□□□ -1.05
YBX3-216ENST00000544622 SYNGR2O43760 224 aa8.48□□□□□ -1.05
YBX3-216ENST00000544622 TCRBP04435 133 aa8.48□□□□□ -1.05
YBX3-216ENST00000544622 OR10J1P30954 320 aa8.48□□□□□ -1.05
YBX3-216ENST00000544622 GAMTQ14353 236 aa8.48□□□□□ -1.05
YBX3-216ENST00000544622 OR4D5Q8NGN0 318 aa8.48□□□□□ -1.05
YBX3-216ENST00000544622 MITD1Q8WV92 249 aa8.48□□□□□ -1.05
YBX3-216ENST00000544622 SCGB2A1O75556 95 aa8.47□□□□□ -1.05
YBX3-216ENST00000544622 MED6O75586 246 aa8.47□□□□□ -1.05
YBX3-216ENST00000544622 DFFBO76075 338 aa8.47□□□□□ -1.05
YBX3-216ENST00000544622 NPPCP23582 126 aa8.47□□□□□ -1.05
YBX3-216ENST00000544622 COQ8AQ8NI60 647 aa8.47□□□□□ -1.05
YBX3-216ENST00000544622 Q8WTZ3 238 aa8.47□□□□□ -1.05
YBX3-216ENST00000544622 CIB3Q96Q77 187 aaPredicted RBP8.47□□□□□ -1.05
YBX3-216ENST00000544622 C20orf85Q9H1P6 137 aa8.47□□□□□ -1.05
YBX3-216ENST00000544622 SACSQ9NZJ4 4579 aa8.47□□□□□ -1.05
YBX3-216ENST00000544622 IGKV1OR2-108A0A075B7D4 117 aa8.46□□□□□ -1.06
YBX3-216ENST00000544622 LOC102724200A0A096LPH7 203 aaPredicted RBP8.46□□□□□ -1.06
YBX3-216ENST00000544622 TRAV2A0A0B4J234 112 aa8.46□□□□□ -1.06
YBX3-216ENST00000544622 A0A1W2PS18 150 aa8.46□□□□□ -1.06
YBX3-216ENST00000544622 TOMM40O96008 361 aa8.46□□□□□ -1.06
YBX3-216ENST00000544622 IFNA4P05014 189 aa8.46□□□□□ -1.06
YBX3-216ENST00000544622 IAPPP10997 89 aa8.46□□□□□ -1.06
YBX3-216ENST00000544622 USF2Q15853 346 aaPredicted RBP8.46□□□□□ -1.06
YBX3-216ENST00000544622 C4orf46Q504U0 113 aa8.46□□□□□ -1.06
YBX3-216ENST00000544622 TCF24Q7RTU0 167 aa8.46□□□□□ -1.06
YBX3-216ENST00000544622 S100ZQ8WXG8 99 aa8.46□□□□□ -1.06
YBX3-216ENST00000544622 ACY3Q96HD9 319 aa8.46□□□□□ -1.06
YBX3-216ENST00000544622 METTL26Q96S19 204 aa8.46□□□□□ -1.06
YBX3-216ENST00000544622 MAGT1Q9H0U3 335 aa8.46□□□□□ -1.06
YBX3-216ENST00000544622 MS4A6AQ9H2W1 248 aa8.46□□□□□ -1.06
YBX3-216ENST00000544622 UBQLN2Q9UHD9 624 aa8.46□□□□□ -1.06
YBX3-216ENST00000544622 TBC1D24Q9ULP9 559 aa8.46□□□□□ -1.06
YBX3-216ENST00000544622 PLECQ15149 4684 aaKnown RBP8.46□□□□□ -1.06
YBX3-216ENST00000544622 IGHV3-66A0A0C4DH42 116 aa8.45□□□□□ -1.06
YBX3-216ENST00000544622 PMS2P5A8MQ11 134 aa8.45□□□□□ -1.06
YBX3-216ENST00000544622 C3orf84H3BNL1 204 aa8.45□□□□□ -1.06
YBX3-216ENST00000544622 BUB3O43684 328 aa8.45□□□□□ -1.06
YBX3-216ENST00000544622 RD3LP0DJH9 198 aa8.45□□□□□ -1.06
YBX3-216ENST00000544622 PSG1P11464 419 aa8.45□□□□□ -1.06
YBX3-216ENST00000544622 BMI1P35226 326 aa8.45□□□□□ -1.06
YBX3-216ENST00000544622 PAX9P55771 341 aa8.45□□□□□ -1.06
YBX3-216ENST00000544622 CMC4P56277 68 aaPredicted RBP8.45□□□□□ -1.06
YBX3-216ENST00000544622 GGTLC1Q9BX51 225 aa8.45□□□□□ -1.06
YBX3-216ENST00000544622 PTTG2Q9NZH5 202 aa8.45□□□□□ -1.06
YBX3-216ENST00000544622 DYNC2H1Q8NCM8 4307 aaKnown RBP8.45□□□□□ -1.06
YBX3-216ENST00000544622 LYSTQ99698 3801 aa8.44□□□□□ -1.06
YBX3-216ENST00000544622 KIR2DL5BA0A0G2JN68 375 aa8.44□□□□□ -1.06
YBX3-216ENST00000544622 KIR2DL5BA0A0G2JPC4 375 aa8.44□□□□□ -1.06
YBX3-216ENST00000544622 WRBO00258 174 aa8.44□□□□□ -1.06
YBX3-216ENST00000544622 IFNA21P01568 189 aa8.44□□□□□ -1.06
YBX3-216ENST00000544622 IL4P05112 153 aa8.44□□□□□ -1.06
YBX3-216ENST00000544622 NKX2-1P43699 371 aaPredicted RBP8.44□□□□□ -1.06
YBX3-216ENST00000544622 P2RY1P47900 373 aa8.44□□□□□ -1.06
YBX3-216ENST00000544622 POLR2GP62487 172 aaKnown RBP eCLIP8.44□□□□□ -1.06
YBX3-216ENST00000544622 RAB11AP62491 216 aa8.44□□□□□ -1.06
YBX3-216ENST00000544622 PAFAH1B2P68402 229 aa8.44□□□□□ -1.06
YBX3-216ENST00000544622 RPP30P78346 268 aaKnown RBP8.44□□□□□ -1.06
YBX3-216ENST00000544622 IFITM3Q01628 133 aa8.44□□□□□ -1.06
YBX3-216ENST00000544622 ZNF90Q03938 601 aa8.44□□□□□ -1.06
YBX3-216ENST00000544622 ASAH1Q13510 395 aa8.44□□□□□ -1.06
YBX3-216ENST00000544622 C16orf54Q6UWD8 224 aa8.44□□□□□ -1.06
YBX3-216ENST00000544622 APRG1Q8IVJ8 170 aa8.44□□□□□ -1.06
YBX3-216ENST00000544622 KIR2DL5AQ8N109 375 aa8.44□□□□□ -1.06
YBX3-216ENST00000544622 GBGT1Q8N5D6 347 aa8.44□□□□□ -1.06
YBX3-216ENST00000544622 THAP8Q8NA92 274 aa8.44□□□□□ -1.06
YBX3-216ENST00000544622 KIR2DL5BQ8NHK3 375 aa8.44□□□□□ -1.06
YBX3-216ENST00000544622 MUC7Q8TAX7 377 aa8.44□□□□□ -1.06
YBX3-216ENST00000544622 DCANP1Q8TF63 244 aa8.44□□□□□ -1.06
YBX3-216ENST00000544622 GLMPQ8WWB7 406 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms