RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 TSKUQ8WUA8 353 aa12.84□□□□□ -0.35
CHD4-210ENST00000544040 ADAMTSL1Q8N6G6 1762 aa12.84□□□□□ -0.35
CHD4-210ENST00000544040 GP6Q9HCN6 339 aa12.84□□□□□ -0.35
CHD4-210ENST00000544040 PAX4O43316 350 aa12.84□□□□□ -0.35
CHD4-210ENST00000544040 NEU4Q8WWR8 484 aaPredicted RBP12.84□□□□□ -0.35
CHD4-210ENST00000544040 ASXL3Q9C0F0 2248 aa12.84□□□□□ -0.35
CHD4-210ENST00000544040 MCM3APO60318 1980 aa12.83□□□□□ -0.35
CHD4-210ENST00000544040 LCNL1Q6ZST4 164 aa12.83□□□□□ -0.35
CHD4-210ENST00000544040 MS4A6AQ9H2W1 248 aa12.83□□□□□ -0.35
CHD4-210ENST00000544040 TRPM3Q9HCF6 1732 aaPredicted RBP12.83□□□□□ -0.36
CHD4-210ENST00000544040 RPL15P61313 204 aaKnown RBP12.83□□□□□ -0.36
CHD4-210ENST00000544040 GUSBP1Q15486 140 aa12.83□□□□□ -0.36
CHD4-210ENST00000544040 IFI6P09912 130 aa12.83□□□□□ -0.36
CHD4-210ENST00000544040 TPTE2P1Q5T6R2 138 aa12.83□□□□□ -0.36
CHD4-210ENST00000544040 SEC11AP67812 179 aa12.83□□□□□ -0.36
CHD4-210ENST00000544040 MAJINQ3KP22 176 aa12.83□□□□□ -0.36
CHD4-210ENST00000544040 ZNF497Q6ZNH5 498 aa12.83□□□□□ -0.36
CHD4-210ENST00000544040 EXOC3-AS1Q8N2X6 119 aa12.83□□□□□ -0.36
CHD4-210ENST00000544040 C17orf100A8MU93 164 aa12.83□□□□□ -0.36
CHD4-210ENST00000544040 TCRAP04437 139 aa12.83□□□□□ -0.36
CHD4-210ENST00000544040 A0A0A6YYD4 124 aa12.82□□□□□ -0.36
CHD4-210ENST00000544040 TNFSF13O75888 250 aa12.82□□□□□ -0.36
CHD4-210ENST00000544040 SIGLEC15Q6ZMC9 328 aa12.82□□□□□ -0.36
CHD4-210ENST00000544040 SCN2AQ99250 2005 aa12.82□□□□□ -0.36
CHD4-210ENST00000544040 C9orf106Q8NAJ2 232 aa12.82□□□□□ -0.36
CHD4-210ENST00000544040 KIF13BQ9NQT8 1826 aa12.82□□□□□ -0.36
CHD4-210ENST00000544040 CDK2AP2O75956 126 aa12.82□□□□□ -0.36
CHD4-210ENST00000544040 MCRIP2Q9BUT9 160 aaKnown RBP12.82□□□□□ -0.36
CHD4-210ENST00000544040 MYOD1P15172 320 aa12.82□□□□□ -0.36
CHD4-210ENST00000544040 IGHV3-53P01767 116 aa12.82□□□□□ -0.36
CHD4-210ENST00000544040 F8VVB4 439 aa12.81□□□□□ -0.36
CHD4-210ENST00000544040 F8VWA3 439 aa12.81□□□□□ -0.36
CHD4-210ENST00000544040 YPEL1O60688 119 aa12.81□□□□□ -0.36
CHD4-210ENST00000544040 YPEL2Q96QA6 119 aa12.81□□□□□ -0.36
CHD4-210ENST00000544040 IGKV1D-8A0A087WSZ0 117 aa12.81□□□□□ -0.36
CHD4-210ENST00000544040 LGALS1P09382 135 aaKnown RBP12.81□□□□□ -0.36
CHD4-210ENST00000544040 C2orf82Q6UX34 121 aa12.81□□□□□ -0.36
CHD4-210ENST00000544040 QSER1Q2KHR3 1735 aa12.81□□□□□ -0.36
CHD4-210ENST00000544040 TRGV11A0A075B6L2 103 aa12.81□□□□□ -0.36
CHD4-210ENST00000544040 LCN12Q6JVE5 192 aa12.81□□□□□ -0.36
CHD4-210ENST00000544040 ZNF319Q9P2F9 582 aa12.81□□□□□ -0.36
CHD4-210ENST00000544040 SSBP2P81877 361 aaPredicted RBP12.81□□□□□ -0.36
CHD4-210ENST00000544040 MORN3Q6PF18 240 aaPredicted RBP12.81□□□□□ -0.36
CHD4-210ENST00000544040 WBP1Q96G27 269 aa12.81□□□□□ -0.36
CHD4-210ENST00000544040 RFNGQ9Y644 331 aa12.81□□□□□ -0.36
CHD4-210ENST00000544040 TRAV8-3A0A0A6YYJ7 113 aa12.81□□□□□ -0.36
CHD4-210ENST00000544040 C8orf46Q8TAG6 207 aa12.81□□□□□ -0.36
CHD4-210ENST00000544040 SNRNP200O75643 2136 aaKnown RBP12.81□□□□□ -0.36
CHD4-210ENST00000544040 PPBPP02775 128 aa12.8□□□□□ -0.36
CHD4-210ENST00000544040 TMEM133Q9H2Q1 129 aa12.8□□□□□ -0.36
CHD4-210ENST00000544040 DUSP14O95147 198 aaKnown RBP12.8□□□□□ -0.36
CHD4-210ENST00000544040 TMEM238C9JI98 176 aa12.8□□□□□ -0.36
CHD4-210ENST00000544040 TIMM23O14925 209 aa12.8□□□□□ -0.36
CHD4-210ENST00000544040 PMS2P5A8MQ11 134 aa12.8□□□□□ -0.36
CHD4-210ENST00000544040 IGKV1-9A0A0C4DH69 117 aa12.8□□□□□ -0.36
CHD4-210ENST00000544040 TPRP12270 2363 aaKnown RBP12.8□□□□□ -0.36
CHD4-210ENST00000544040 LYZL1Q6UWQ5 148 aa12.79□□□□□ -0.36
CHD4-210ENST00000544040 USP54Q70EL1 1684 aa12.79□□□□□ -0.36
CHD4-210ENST00000544040 PAX8Q06710 450 aa12.79□□□□□ -0.36
CHD4-210ENST00000544040 F2Z2F3 143 aa12.79□□□□□ -0.36
CHD4-210ENST00000544040 ZNF876PQ49A33 203 aa12.79□□□□□ -0.36
CHD4-210ENST00000544040 BMPERQ8N8U9 685 aa12.79□□□□□ -0.36
CHD4-210ENST00000544040 GTF3AQ92664 365 aaKnown RBP12.79□□□□□ -0.36
CHD4-210ENST00000544040 ABHD17AQ96GS6 310 aa12.79□□□□□ -0.36
CHD4-210ENST00000544040 INS-IGF2F8WCM5 200 aa12.79□□□□□ -0.36
CHD4-210ENST00000544040 INSP01308 110 aa12.79□□□□□ -0.36
CHD4-210ENST00000544040 ESDP10768 282 aa12.79□□□□□ -0.36
CHD4-210ENST00000544040 PRCDQ00LT1 54 aa12.79□□□□□ -0.36
CHD4-210ENST00000544040 TMEM256Q8N2U0 113 aa12.79□□□□□ -0.36
CHD4-210ENST00000544040 RP1L1Q8IWN7 2480 aaPredicted RBP12.79□□□□□ -0.36
CHD4-210ENST00000544040 ITGB1BP1O14713 200 aa12.79□□□□□ -0.36
CHD4-210ENST00000544040 MLNRO43193 412 aa12.79□□□□□ -0.36
CHD4-210ENST00000544040 PSG1P11464 419 aa12.79□□□□□ -0.36
CHD4-210ENST00000544040 HGFACQ04756 655 aa12.79□□□□□ -0.36
CHD4-210ENST00000544040 C10orf55Q5SWW7 151 aa12.79□□□□□ -0.36
CHD4-210ENST00000544040 PRDM6Q9NQX0 595 aa12.79□□□□□ -0.36
CHD4-210ENST00000544040 RCHY1Q96PM5 261 aa12.79□□□□□ -0.36
CHD4-210ENST00000544040 FAM90A1Q86YD7 464 aa12.78□□□□□ -0.36
CHD4-210ENST00000544040 FGF16O43320 207 aa12.78□□□□□ -0.36
CHD4-210ENST00000544040 IGFL4Q6B9Z1 124 aa12.78□□□□□ -0.36
CHD4-210ENST00000544040 GAGE2AQ6NT46 116 aa12.78□□□□□ -0.36
CHD4-210ENST00000544040 COLCA2A8K830 154 aa12.78□□□□□ -0.36
CHD4-210ENST00000544040 RP1P56715 2156 aa12.78□□□□□ -0.36
CHD4-210ENST00000544040 NDUFS6O75380 124 aaKnown RBP12.78□□□□□ -0.36
CHD4-210ENST00000544040 ZNF138P52744 262 aa12.78□□□□□ -0.36
CHD4-210ENST00000544040 TREML4Q6UXN2 200 aa12.78□□□□□ -0.36
CHD4-210ENST00000544040 DLEU1O43261 78 aa12.77□□□□□ -0.36
CHD4-210ENST00000544040 SPTBP11277 2137 aa12.77□□□□□ -0.36
CHD4-210ENST00000544040 DUTP33316 252 aaKnown RBP12.77□□□□□ -0.36
CHD4-210ENST00000544040 MPV17L2Q567V2 206 aa12.77□□□□□ -0.36
CHD4-210ENST00000544040 GLI3P10071 1580 aa12.77□□□□□ -0.36
CHD4-210ENST00000544040 NDPQ00604 133 aa12.77□□□□□ -0.36
CHD4-210ENST00000544040 LINC00114Q6XXX2 140 aa12.77□□□□□ -0.36
CHD4-210ENST00000544040 COX11Q9Y6N1 276 aa12.77□□□□□ -0.36
CHD4-210ENST00000544040 SMKR1H3BMG3 65 aa12.77□□□□□ -0.37
CHD4-210ENST00000544040 PRSS22Q9GZN4 317 aa12.77□□□□□ -0.37
CHD4-210ENST00000544040 A0A1W2PR77 199 aa12.77□□□□□ -0.37
CHD4-210ENST00000544040 ASCL4Q6XD76 172 aa12.77□□□□□ -0.37
CHD4-210ENST00000544040 TMEM219Q86XT9 240 aa12.77□□□□□ -0.37
CHD4-210ENST00000544040 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms