RNA–Protein interactions for RNA: ENST00000543462.1

VEGFB-204, Transcript of vascular endothelial growth factor B, humanhuman

TSL 2

Gene VEGFB, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-204ENST00000543462 ARL16Q0P5N6 197 aa7.49□□□□□ -1.21
VEGFB-204ENST00000543462 TIGITQ495A1 244 aa7.49□□□□□ -1.21
VEGFB-204ENST00000543462 FAM106AQ4KMX7 169 aa7.49□□□□□ -1.21
VEGFB-204ENST00000543462 TM4SF20Q53R12 229 aa7.49□□□□□ -1.21
VEGFB-204ENST00000543462 SPANXN5Q5MJ07 72 aa7.49□□□□□ -1.21
VEGFB-204ENST00000543462 ETFRF1Q6IPR1 90 aa7.49□□□□□ -1.21
VEGFB-204ENST00000543462 ZNF600Q6ZNG1 722 aa7.49□□□□□ -1.21
VEGFB-204ENST00000543462 ACOT7LQ6ZUV0 252 aa7.49□□□□□ -1.21
VEGFB-204ENST00000543462 OR11H7Q8NGC8 314 aa7.49□□□□□ -1.21
VEGFB-204ENST00000543462 OR1S2Q8NGQ3 325 aa7.49□□□□□ -1.21
VEGFB-204ENST00000543462 NPIPB3Q92617 1050 aa7.49□□□□□ -1.21
VEGFB-204ENST00000543462 ELOVL1Q9BW60 279 aa7.49□□□□□ -1.21
VEGFB-204ENST00000543462 DAZ1Q9NQZ3 744 aaKnown RBP7.49□□□□□ -1.21
VEGFB-204ENST00000543462 PSENENQ9NZ42 101 aa7.49□□□□□ -1.21
VEGFB-204ENST00000543462 MLXQ9UH92 298 aa7.49□□□□□ -1.21
VEGFB-204ENST00000543462 STRAPQ9Y3F4 350 aaKnown RBP7.49□□□□□ -1.21
VEGFB-204ENST00000543462 TRAV30A0A087WSZ9 112 aa7.48□□□□□ -1.21
VEGFB-204ENST00000543462 IZUMO1RA6ND01 250 aa7.48□□□□□ -1.21
VEGFB-204ENST00000543462 FAM25EA8MYX2 175 aa7.48□□□□□ -1.21
VEGFB-204ENST00000543462 K7EIL1 84 aa7.48□□□□□ -1.21
VEGFB-204ENST00000543462 DEDDO75618 318 aa7.48□□□□□ -1.21
VEGFB-204ENST00000543462 IFNA4P05014 189 aa7.48□□□□□ -1.21
VEGFB-204ENST00000543462 OR10J1P30954 320 aa7.48□□□□□ -1.21
VEGFB-204ENST00000543462 RAB11AP62491 216 aa7.48□□□□□ -1.21
VEGFB-204ENST00000543462 DEFB114Q30KQ6 69 aa7.48□□□□□ -1.21
VEGFB-204ENST00000543462 TOMM20LQ6UXN7 152 aa7.48□□□□□ -1.21
VEGFB-204ENST00000543462 OR2K2Q8NGT1 345 aa7.48□□□□□ -1.21
VEGFB-204ENST00000543462 MARC2Q969Z3 335 aa7.48□□□□□ -1.21
VEGFB-204ENST00000543462 LYRM2Q9NU23 88 aaPredicted RBP7.48□□□□□ -1.21
VEGFB-204ENST00000543462 UFC1Q9Y3C8 167 aa7.48□□□□□ -1.21
VEGFB-204ENST00000543462 PUS1Q9Y606 427 aaKnown RBP eCLIP7.48□□□□□ -1.21
VEGFB-204ENST00000543462 U3KQE9 123 aa7.48□□□□□ -1.21
VEGFB-204ENST00000543462 DNAH9Q9NYC9 4486 aa7.47□□□□□ -1.21
VEGFB-204ENST00000543462 IGHV3OR16-8A0A075B7F1 116 aa7.47□□□□□ -1.21
VEGFB-204ENST00000543462 A0A1B0GVG6 124 aa7.47□□□□□ -1.21
VEGFB-204ENST00000543462 WI2-2373I1.2A0A1W2PRP0 233 aa7.47□□□□□ -1.21
VEGFB-204ENST00000543462 IGSF23A1L1A6 192 aa7.47□□□□□ -1.21
VEGFB-204ENST00000543462 TOMM40O96008 361 aa7.47□□□□□ -1.21
VEGFB-204ENST00000543462 PRB2P02812 416 aaPredicted RBP7.47□□□□□ -1.21
VEGFB-204ENST00000543462 METTL15P1P0C7V9 234 aa7.47□□□□□ -1.21
VEGFB-204ENST00000543462 RPP30P78346 268 aaKnown RBP7.47□□□□□ -1.21
VEGFB-204ENST00000543462 DLK1P80370 383 aa7.47□□□□□ -1.21
VEGFB-204ENST00000543462 DEFA6Q01524 100 aa7.47□□□□□ -1.21
VEGFB-204ENST00000543462 FCN2Q15485 313 aa7.47□□□□□ -1.21
VEGFB-204ENST00000543462 VWC2Q2TAL6 325 aa7.47□□□□□ -1.21
VEGFB-204ENST00000543462 ACY3Q96HD9 319 aa7.47□□□□□ -1.21
VEGFB-204ENST00000543462 TRGV9Q99603 122 aa7.47□□□□□ -1.21
VEGFB-204ENST00000543462 RNF126Q9BV68 326 aa7.47□□□□□ -1.21
VEGFB-204ENST00000543462 VSIRQ9H7M9 311 aa7.47□□□□□ -1.21
VEGFB-204ENST00000543462 TECRQ9NZ01 308 aaKnown RBP7.47□□□□□ -1.21
VEGFB-204ENST00000543462 OR5AC2Q9NZP5 309 aa7.47□□□□□ -1.21
VEGFB-204ENST00000543462 MRPL27Q9P0M9 148 aaKnown RBP7.47□□□□□ -1.21
VEGFB-204ENST00000543462 MGAT4CQ9UBM8 478 aa7.47□□□□□ -1.21
VEGFB-204ENST00000543462 ZNF256Q9Y2P7 627 aaPredicted RBP7.47□□□□□ -1.21
VEGFB-204ENST00000543462 LSM5Q9Y4Y9 91 aaKnown RBP7.47□□□□□ -1.21
VEGFB-204ENST00000543462 LSM4Q9Y4Z0 139 aaKnown RBP7.47□□□□□ -1.21
VEGFB-204ENST00000543462 TRAV14DV4A0A0A6YYC5 116 aa7.46□□□□□ -1.22
VEGFB-204ENST00000543462 IGHV7-4-1A0A0J9YVY3 117 aa7.46□□□□□ -1.22
VEGFB-204ENST00000543462 ZNF320A2RRD8 509 aa7.46□□□□□ -1.22
VEGFB-204ENST00000543462 ZNF785A8K8V0 405 aa7.46□□□□□ -1.22
VEGFB-204ENST00000543462 G3V3Q6 166 aa7.46□□□□□ -1.22
VEGFB-204ENST00000543462 SSNA1O43805 119 aa7.46□□□□□ -1.22
VEGFB-204ENST00000543462 LYL1P12980 280 aa7.46□□□□□ -1.22
VEGFB-204ENST00000543462 CRYBB3P26998 211 aa7.46□□□□□ -1.22
VEGFB-204ENST00000543462 CYCSP99999 105 aaKnown RBP7.46□□□□□ -1.22
VEGFB-204ENST00000543462 USF2Q15853 346 aaPredicted RBP7.46□□□□□ -1.22
VEGFB-204ENST00000543462 CD300EQ496F6 205 aaPredicted RBP7.46□□□□□ -1.22
VEGFB-204ENST00000543462 FAM90A2PQ658T7 463 aa7.46□□□□□ -1.22
VEGFB-204ENST00000543462 TMEM144Q7Z5S9 345 aa7.46□□□□□ -1.22
VEGFB-204ENST00000543462 TMEM61Q8N0U2 210 aa7.46□□□□□ -1.22
VEGFB-204ENST00000543462 TMEM252Q8N6L7 170 aa7.46□□□□□ -1.22
VEGFB-204ENST00000543462 PPP1R1CQ8WVI7 109 aa7.46□□□□□ -1.22
VEGFB-204ENST00000543462 SLC35E1Q96K37 410 aa7.46□□□□□ -1.22
VEGFB-204ENST00000543462 GGACTQ9BVM4 153 aa7.46□□□□□ -1.22
VEGFB-204ENST00000543462 SMPXQ9UHP9 88 aa7.46□□□□□ -1.22
VEGFB-204ENST00000543462 COL7A1Q02388 2944 aa7.46□□□□□ -1.22
VEGFB-204ENST00000543462 FAM24AA6NFZ4 105 aa7.45□□□□□ -1.22
VEGFB-204ENST00000543462 CHEK1O14757 476 aa7.45□□□□□ -1.22
VEGFB-204ENST00000543462 ZNF207O43670 478 aaKnown RBP7.45□□□□□ -1.22
VEGFB-204ENST00000543462 PFDN1O60925 122 aa7.45□□□□□ -1.22
VEGFB-204ENST00000543462 MPC2O95563 127 aa7.45□□□□□ -1.22
VEGFB-204ENST00000543462 PSG1P11464 419 aa7.45□□□□□ -1.22
VEGFB-204ENST00000543462 GP9P14770 177 aa7.45□□□□□ -1.22
VEGFB-204ENST00000543462 BCAP31P51572 246 aa7.45□□□□□ -1.22
VEGFB-204ENST00000543462 S100A10P60903 97 aa7.45□□□□□ -1.22
VEGFB-204ENST00000543462 RRAS2P62070 204 aaPredicted RBP7.45□□□□□ -1.22
VEGFB-204ENST00000543462 ZNF90Q03938 601 aa7.45□□□□□ -1.22
VEGFB-204ENST00000543462 LCN12Q6JVE5 192 aa7.45□□□□□ -1.22
VEGFB-204ENST00000543462 BTNL8Q6UX41 500 aa7.45□□□□□ -1.22
VEGFB-204ENST00000543462 TMEM182Q6ZP80 229 aaPredicted RBP7.45□□□□□ -1.22
VEGFB-204ENST00000543462 Q8N1Y9 231 aa7.45□□□□□ -1.22
VEGFB-204ENST00000543462 STPG3Q8N7X2 389 aa7.45□□□□□ -1.22
VEGFB-204ENST00000543462 CHAC2Q8WUX2 184 aa7.45□□□□□ -1.22
VEGFB-204ENST00000543462 PRR25Q96S07 402 aa7.45□□□□□ -1.22
VEGFB-204ENST00000543462 C20orf24Q9BUV8 137 aa7.45□□□□□ -1.22
VEGFB-204ENST00000543462 TRAV25A0A0B4J276 109 aa7.44□□□□□ -1.22
VEGFB-204ENST00000543462 E5RGE8 158 aa7.44□□□□□ -1.22
VEGFB-204ENST00000543462 L7N2F9 121 aa7.44□□□□□ -1.22
VEGFB-204ENST00000543462 SCGB2A1O75556 95 aa7.44□□□□□ -1.22
VEGFB-204ENST00000543462 APOHP02749 345 aaPredicted RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms