RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 PRR20CP86479 221 aa21.73■■□□□ 1.07
CCM2-218ENST00000541586 PRR20DP86480 221 aa21.73■■□□□ 1.07
CCM2-218ENST00000541586 PRR20BP86481 221 aa21.73■■□□□ 1.07
CCM2-218ENST00000541586 PRR20AP86496 221 aa21.73■■□□□ 1.07
CCM2-218ENST00000541586 ACOT6Q3I5F7 207 aaPredicted RBP21.73■■□□□ 1.07
CCM2-218ENST00000541586 GCSAMLQ5JQS6 135 aa21.73■■□□□ 1.07
CCM2-218ENST00000541586 IGKV1D-37A0A075B6S9 117 aa21.72■■□□□ 1.07
CCM2-218ENST00000541586 CYB5BO43169 146 aa21.72■■□□□ 1.07
CCM2-218ENST00000541586 TMEM95Q3KNT9 176 aa21.72■■□□□ 1.07
CCM2-218ENST00000541586 SSX7Q7RTT5 188 aa21.72■■□□□ 1.07
CCM2-218ENST00000541586 BPIFCQ8NFQ6 507 aa21.72■■□□□ 1.07
CCM2-218ENST00000541586 ATRQ13535 2644 aa21.72■■□□□ 1.07
CCM2-218ENST00000541586 A0A1B0GV50 99 aa21.72■■□□□ 1.07
CCM2-218ENST00000541586 IGHG2P01859 326 aa21.72■■□□□ 1.07
CCM2-218ENST00000541586 LINC00869P0C866 280 aa21.72■■□□□ 1.07
CCM2-218ENST00000541586 CRIP2P52943 208 aaPredicted RBP21.72■■□□□ 1.07
CCM2-218ENST00000541586 IL34Q6ZMJ4 242 aa21.72■■□□□ 1.07
CCM2-218ENST00000541586 SFT2D1Q8WV19 159 aa21.72■■□□□ 1.07
CCM2-218ENST00000541586 SLC39A9Q9NUM3 307 aa21.72■■□□□ 1.07
CCM2-218ENST00000541586 ZFP92A6NM28 416 aa21.71■■□□□ 1.07
CCM2-218ENST00000541586 NUDT19A8MXV4 375 aa21.71■■□□□ 1.07
CCM2-218ENST00000541586 SPSB3Q6PJ21 355 aa21.71■■□□□ 1.07
CCM2-218ENST00000541586 CYP2G1PQ6ZSU1 146 aa21.71■■□□□ 1.07
CCM2-218ENST00000541586 SLC35E3Q7Z769 313 aa21.71■■□□□ 1.07
CCM2-218ENST00000541586 LINC00527Q9UJ94 153 aa21.71■■□□□ 1.07
CCM2-218ENST00000541586 GATA2P23769 480 aaPredicted RBP21.7■■□□□ 1.06
CCM2-218ENST00000541586 EIF4E3Q8N5X7 224 aaKnown RBP21.7■■□□□ 1.06
CCM2-218ENST00000541586 IGF1P05019 195 aa21.69■■□□□ 1.06
CCM2-218ENST00000541586 RIPPLY3P57055 190 aa21.69■■□□□ 1.06
CCM2-218ENST00000541586 C19orf54Q5BKX5 351 aa21.69■■□□□ 1.06
CCM2-218ENST00000541586 OR4F5Q8NH21 305 aa21.69■■□□□ 1.06
CCM2-218ENST00000541586 OR4X1Q8NH49 305 aa21.69■■□□□ 1.06
CCM2-218ENST00000541586 MBD3L1Q8WWY6 194 aa21.69■■□□□ 1.06
CCM2-218ENST00000541586 THYN1Q9P016 225 aa21.69■■□□□ 1.06
CCM2-218ENST00000541586 FBN1P35555 2871 aaKnown RBP21.69■■□□□ 1.06
CCM2-218ENST00000541586 TRAV41A0A0B4J266 112 aa21.69■■□□□ 1.06
CCM2-218ENST00000541586 TCRBV4S1A1TA0A5B7 111 aa21.69■■□□□ 1.06
CCM2-218ENST00000541586 RAB19A4D1S5 217 aa21.69■■□□□ 1.06
CCM2-218ENST00000541586 ZNF90Q03938 601 aa21.69■■□□□ 1.06
CCM2-218ENST00000541586 FAM122CQ6P4D5 195 aa21.69■■□□□ 1.06
CCM2-218ENST00000541586 LCN15Q6UWW0 184 aa21.69■■□□□ 1.06
CCM2-218ENST00000541586 LINC01006Q8NI28 216 aa21.69■■□□□ 1.06
CCM2-218ENST00000541586 C19orf24Q9BVV8 132 aa21.69■■□□□ 1.06
CCM2-218ENST00000541586 SLC25A22Q9H936 323 aa21.69■■□□□ 1.06
CCM2-218ENST00000541586 EIF3GO75821 320 aaKnown RBP eCLIP21.68■■□□□ 1.06
CCM2-218ENST00000541586 OR2J3O76001 311 aa21.68■■□□□ 1.06
CCM2-218ENST00000541586 NDUFA7O95182 113 aa21.68■■□□□ 1.06
CCM2-218ENST00000541586 CCL20P78556 96 aa21.68■■□□□ 1.06
CCM2-218ENST00000541586 KLK9Q2XQG4 91 aa21.68■■□□□ 1.06
CCM2-218ENST00000541586 TMEM158Q8WZ71 300 aa21.68■■□□□ 1.06
CCM2-218ENST00000541586 ACTR3CQ9C0K3 210 aaPredicted RBP21.68■■□□□ 1.06
CCM2-218ENST00000541586 KLK9Q9UKQ9 250 aa21.68■■□□□ 1.06
CCM2-218ENST00000541586 TRAV1-1A0A0B4J248 108 aa21.67■■□□□ 1.06
CCM2-218ENST00000541586 NDUFB8O95169 186 aa21.67■■□□□ 1.06
CCM2-218ENST00000541586 HIST1H1BP16401 226 aaKnown RBP21.67■■□□□ 1.06
CCM2-218ENST00000541586 Q8N2B8 174 aa21.67■■□□□ 1.06
CCM2-218ENST00000541586 NOL4LQ96MY1 436 aaPredicted RBP21.67■■□□□ 1.06
CCM2-218ENST00000541586 TRGV9Q99603 122 aa21.67■■□□□ 1.06
CCM2-218ENST00000541586 CTXND1A0A1B0GTU2 59 aa21.66■■□□□ 1.06
CCM2-218ENST00000541586 HAX1O00165 279 aa21.66■■□□□ 1.06
CCM2-218ENST00000541586 S100A1P23297 94 aa21.66■■□□□ 1.06
CCM2-218ENST00000541586 DEFA5Q01523 94 aa21.66■■□□□ 1.06
CCM2-218ENST00000541586 C16orf95Q9H693 158 aa21.66■■□□□ 1.06
CCM2-218ENST00000541586 MAP1LC3B2A6NCE7 125 aa21.66■■□□□ 1.06
CCM2-218ENST00000541586 SEC14L6B5MCN3 397 aa21.66■■□□□ 1.06
CCM2-218ENST00000541586 HBE1P02100 147 aa21.66■■□□□ 1.06
CCM2-218ENST00000541586 COMMD1Q8N668 190 aa21.66■■□□□ 1.06
CCM2-218ENST00000541586 RAB24Q969Q5 203 aa21.66■■□□□ 1.06
CCM2-218ENST00000541586 MAP1LC3BQ9GZQ8 125 aa21.66■■□□□ 1.06
CCM2-218ENST00000541586 ZNF355PQ9NSJ1 428 aa21.66■■□□□ 1.06
CCM2-218ENST00000541586 FBXL7Q9UJT9 491 aa21.66■■□□□ 1.06
CCM2-218ENST00000541586 S4R3C0 116 aa21.66■■□□□ 1.06
CCM2-218ENST00000541586 IGLC1P0CG04 106 aa21.65■■□□□ 1.06
CCM2-218ENST00000541586 CDC34P49427 236 aaPredicted RBP21.65■■□□□ 1.06
CCM2-218ENST00000541586 SELENOTP62341 195 aa21.65■■□□□ 1.06
CCM2-218ENST00000541586 RNF114Q9Y508 228 aa21.65■■□□□ 1.06
CCM2-218ENST00000541586 TRBV9A0A0B4J1U6 114 aa21.64■■□□□ 1.06
CCM2-218ENST00000541586 HMGB3O15347 200 aaKnown RBP21.64■■□□□ 1.06
CCM2-218ENST00000541586 CLN5O75503 358 aa21.64■■□□□ 1.06
CCM2-218ENST00000541586 FGF8P55075 233 aaPredicted RBP21.64■■□□□ 1.06
CCM2-218ENST00000541586 SRSF3P84103 164 aaKnown RBP21.64■■□□□ 1.06
CCM2-218ENST00000541586 FOXL1Q12952 345 aa21.64■■□□□ 1.06
CCM2-218ENST00000541586 SERTAD4Q9NUC0 356 aa21.64■■□□□ 1.06
CCM2-218ENST00000541586 A0A1W2PPV4 95 aa21.63■■□□□ 1.05
CCM2-218ENST00000541586 CLPSL1A2RUU4 121 aa21.63■■□□□ 1.05
CCM2-218ENST00000541586 I3L521 148 aa21.63■■□□□ 1.05
CCM2-218ENST00000541586 AP4M1O00189 453 aa21.63■■□□□ 1.05
CCM2-218ENST00000541586 MFAP4P55083 255 aa21.63■■□□□ 1.05
CCM2-218ENST00000541586 RHOGP84095 191 aa21.63■■□□□ 1.05
CCM2-218ENST00000541586 C21orf62Q9NYP8 219 aa21.63■■□□□ 1.05
CCM2-218ENST00000541586 UQCC3Q6UW78 93 aa21.62■■□□□ 1.05
CCM2-218ENST00000541586 FAM210AQ96ND0 272 aa21.62■■□□□ 1.05
CCM2-218ENST00000541586 TMEM89A2RUT3 159 aa21.61■■□□□ 1.05
CCM2-218ENST00000541586 NPBWR1P48145 328 aa21.61■■□□□ 1.05
CCM2-218ENST00000541586 MS4A10Q96PG2 267 aa21.61■■□□□ 1.05
CCM2-218ENST00000541586 SEPSECSQ9HD40 501 aaKnown RBP21.61■■□□□ 1.05
CCM2-218ENST00000541586 F8W735 103 aaPredicted RBP21.6■■□□□ 1.05
CCM2-218ENST00000541586 IGKV1-17P01599 117 aa21.6■■□□□ 1.05
CCM2-218ENST00000541586 PPIFP30405 207 aaKnown RBP21.6■■□□□ 1.05
CCM2-218ENST00000541586 C15orf32Q32M92 178 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms