RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 EBLN2Q6P2I7 272 aa6.45□□□□□ -1.38
YBX3-211ENST00000541351 LYSMD2Q8IV50 215 aa6.45□□□□□ -1.38
YBX3-211ENST00000541351 CMTM1Q8IZ96 169 aa6.45□□□□□ -1.38
YBX3-211ENST00000541351 SPAG16Q8N0X2 631 aa6.45□□□□□ -1.38
YBX3-211ENST00000541351 OR52I1Q8NGK6 324 aa6.45□□□□□ -1.38
YBX3-211ENST00000541351 DYNC2LI1Q8TCX1 351 aa6.45□□□□□ -1.38
YBX3-211ENST00000541351 RBPMSQ93062 196 aaKnown RBP6.45□□□□□ -1.38
YBX3-211ENST00000541351 TMEM230Q96A57 120 aa6.45□□□□□ -1.38
YBX3-211ENST00000541351 PGLYRP3Q96LB9 341 aa6.45□□□□□ -1.38
YBX3-211ENST00000541351 SAV1Q9H4B6 383 aaPredicted RBP6.45□□□□□ -1.38
YBX3-211ENST00000541351 NDUFA4L2Q9NRX3 87 aa6.45□□□□□ -1.38
YBX3-211ENST00000541351 OAZ3Q9UMX2 235 aa6.45□□□□□ -1.38
YBX3-211ENST00000541351 A0A0A6YYD4 124 aa6.44□□□□□ -1.38
YBX3-211ENST00000541351 PNMA8CA0A1B0GUJ8 204 aa6.44□□□□□ -1.38
YBX3-211ENST00000541351 LIMS3P0CW19 117 aa6.44□□□□□ -1.38
YBX3-211ENST00000541351 LIMS4P0CW20 117 aa6.44□□□□□ -1.38
YBX3-211ENST00000541351 RPS11P62280 158 aaKnown RBP eCLIP6.44□□□□□ -1.38
YBX3-211ENST00000541351 MSMO1Q15800 293 aa6.44□□□□□ -1.38
YBX3-211ENST00000541351 Q6ZS49 121 aa6.44□□□□□ -1.38
YBX3-211ENST00000541351 C1orf158Q8N1D5 194 aa6.44□□□□□ -1.38
YBX3-211ENST00000541351 ZNF709Q8N972 641 aa6.44□□□□□ -1.38
YBX3-211ENST00000541351 ZBTB34Q8NCN2 500 aa6.44□□□□□ -1.38
YBX3-211ENST00000541351 ZNF555Q8NEP9 628 aa6.44□□□□□ -1.38
YBX3-211ENST00000541351 COQ8AQ8NI60 647 aa6.44□□□□□ -1.38
YBX3-211ENST00000541351 GLMPQ8WWB7 406 aa6.44□□□□□ -1.38
YBX3-211ENST00000541351 PHYHIPQ92561 330 aa6.44□□□□□ -1.38
YBX3-211ENST00000541351 PINX1Q96BK5 328 aaKnown RBP6.44□□□□□ -1.38
YBX3-211ENST00000541351 YIPF6Q96EC8 236 aa6.44□□□□□ -1.38
YBX3-211ENST00000541351 IGF2BP2-AS1Q96M15 143 aa6.44□□□□□ -1.38
YBX3-211ENST00000541351 GPHA2Q96T91 129 aa6.44□□□□□ -1.38
YBX3-211ENST00000541351 PLEKHA2Q9HB19 425 aa6.44□□□□□ -1.38
YBX3-211ENST00000541351 FAM212BQ9NTI7 297 aaPredicted RBP6.44□□□□□ -1.38
YBX3-211ENST00000541351 MRPS18AQ9NVS2 196 aaKnown RBP6.44□□□□□ -1.38
YBX3-211ENST00000541351 COMMD9Q9P000 198 aa6.44□□□□□ -1.38
YBX3-211ENST00000541351 PFDN2Q9UHV9 154 aa6.44□□□□□ -1.38
YBX3-211ENST00000541351 TIMM8BQ9Y5J9 83 aaPredicted RBP6.44□□□□□ -1.38
YBX3-211ENST00000541351 LRP1Q07954 4544 aaKnown RBP6.44□□□□□ -1.38
YBX3-211ENST00000541351 LRP2P98164 4655 aa6.43□□□□□ -1.38
YBX3-211ENST00000541351 A0A0B4J293 547 aa6.43□□□□□ -1.38
YBX3-211ENST00000541351 GAS8-AS1O95177 125 aa6.43□□□□□ -1.38
YBX3-211ENST00000541351 CD37P11049 281 aa6.43□□□□□ -1.38
YBX3-211ENST00000541351 NUP62P37198 522 aaPredicted RBP6.43□□□□□ -1.38
YBX3-211ENST00000541351 ETV6P41212 452 aa6.43□□□□□ -1.38
YBX3-211ENST00000541351 TMEM50BP56557 158 aa6.43□□□□□ -1.38
YBX3-211ENST00000541351 CTAG1AP78358 180 aa6.43□□□□□ -1.38
YBX3-211ENST00000541351 QRFPP83859 136 aa6.43□□□□□ -1.38
YBX3-211ENST00000541351 ASAH1Q13510 395 aa6.43□□□□□ -1.38
YBX3-211ENST00000541351 ARL6IP1Q15041 203 aa6.43□□□□□ -1.38
YBX3-211ENST00000541351 TBCEQ15813 527 aaPredicted RBP6.43□□□□□ -1.38
YBX3-211ENST00000541351 ZFP69Q49AA0 526 aa6.43□□□□□ -1.38
YBX3-211ENST00000541351 SAMD13Q5VXD3 122 aa6.43□□□□□ -1.38
YBX3-211ENST00000541351 SFXN4Q6P4A7 337 aa6.43□□□□□ -1.38
YBX3-211ENST00000541351 OR6F1Q8NGZ6 308 aa6.43□□□□□ -1.38
YBX3-211ENST00000541351 RAB3CQ96E17 227 aa6.43□□□□□ -1.38
YBX3-211ENST00000541351 CCDC32Q9BV29 185 aa6.43□□□□□ -1.38
YBX3-211ENST00000541351 MSRB1Q9NZV6 116 aa6.43□□□□□ -1.38
YBX3-211ENST00000541351 FAM30AQ9NZY2 134 aa6.43□□□□□ -1.38
YBX3-211ENST00000541351 CCDC59Q9P031 241 aaKnown RBP6.43□□□□□ -1.38
YBX3-211ENST00000541351 PRNDQ9UKY0 176 aa6.43□□□□□ -1.38
YBX3-211ENST00000541351 RABL2BQ9UNT1 228 aa6.43□□□□□ -1.38
YBX3-211ENST00000541351 TPRKBQ9Y3C4 175 aa6.43□□□□□ -1.38
YBX3-211ENST00000541351 OR51B2Q9Y5P1 312 aa6.43□□□□□ -1.38
YBX3-211ENST00000541351 LY96Q9Y6Y9 160 aa6.43□□□□□ -1.38
YBX3-211ENST00000541351 TRAV5A0A0B4J249 113 aa6.42□□□□□ -1.38
YBX3-211ENST00000541351 CORTO00230 105 aa6.42□□□□□ -1.38
YBX3-211ENST00000541351 INSP01308 110 aa6.42□□□□□ -1.38
YBX3-211ENST00000541351 ALPLP05186 524 aa6.42□□□□□ -1.38
YBX3-211ENST00000541351 EVI2AP22794 236 aa6.42□□□□□ -1.38
YBX3-211ENST00000541351 RORCP51449 518 aa6.42□□□□□ -1.38
YBX3-211ENST00000541351 ERHP84090 104 aaKnown RBP6.42□□□□□ -1.38
YBX3-211ENST00000541351 C16orf54Q6UWD8 224 aa6.42□□□□□ -1.38
YBX3-211ENST00000541351 SIGLEC15Q6ZMC9 328 aa6.42□□□□□ -1.38
YBX3-211ENST00000541351 Q6ZSA8 131 aa6.42□□□□□ -1.38
YBX3-211ENST00000541351 C10orf126Q8N4M7 172 aa6.42□□□□□ -1.38
YBX3-211ENST00000541351 MCFD2Q8NI22 146 aa6.42□□□□□ -1.38
YBX3-211ENST00000541351 C16orf74Q96GX8 76 aa6.42□□□□□ -1.38
YBX3-211ENST00000541351 SLIRPQ9GZT3 109 aaKnown RBP6.42□□□□□ -1.38
YBX3-211ENST00000541351 SLC35B3Q9H1N7 401 aa6.42□□□□□ -1.38
YBX3-211ENST00000541351 AMBNQ9NP70 447 aa6.42□□□□□ -1.38
YBX3-211ENST00000541351 FGF20Q9NP95 211 aaPredicted RBP6.42□□□□□ -1.38
YBX3-211ENST00000541351 TRAV30A0A087WSZ9 112 aa6.41□□□□□ -1.38
YBX3-211ENST00000541351 A0A0J9YY99 117 aa6.41□□□□□ -1.38
YBX3-211ENST00000541351 A0A1B0GU03 582 aa6.41□□□□□ -1.38
YBX3-211ENST00000541351 MARCH11A6NNE9 402 aa6.41□□□□□ -1.38
YBX3-211ENST00000541351 FOXI3A8MTJ6 420 aaPredicted RBP6.41□□□□□ -1.38
YBX3-211ENST00000541351 NXPH4O95158 308 aa6.41□□□□□ -1.38
YBX3-211ENST00000541351 TMEM50AO95807 157 aa6.41□□□□□ -1.38
YBX3-211ENST00000541351 CD1AP06126 327 aa6.41□□□□□ -1.38
YBX3-211ENST00000541351 NFYAP23511 347 aaPredicted RBP6.41□□□□□ -1.38
YBX3-211ENST00000541351 PSMB3P49720 205 aa6.41□□□□□ -1.38
YBX3-211ENST00000541351 BRWD1-AS2P59051 145 aa6.41□□□□□ -1.38
YBX3-211ENST00000541351 EIF4EBP1Q13541 118 aaPredicted RBP6.41□□□□□ -1.38
YBX3-211ENST00000541351 ZNF79Q15937 498 aa6.41□□□□□ -1.38
YBX3-211ENST00000541351 PLAC9Q5JTB6 97 aa6.41□□□□□ -1.38
YBX3-211ENST00000541351 ZNF493Q6ZR52 646 aa6.41□□□□□ -1.38
YBX3-211ENST00000541351 TMEM256Q8N2U0 113 aa6.41□□□□□ -1.38
YBX3-211ENST00000541351 TMEM203Q969S6 136 aa6.41□□□□□ -1.38
YBX3-211ENST00000541351 LINC00052Q96N35 136 aa6.41□□□□□ -1.38
YBX3-211ENST00000541351 SCN3BQ9NY72 215 aa6.41□□□□□ -1.38
YBX3-211ENST00000541351 RABL2AQ9UBK7 228 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms