RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 MRPL27Q9P0M9 148 aaKnown RBP4.31□□□□□ -1.72
SUDS3-202ENST00000541280 U3KQK5 164 aa4.31□□□□□ -1.72
SUDS3-202ENST00000541280 DSCAML1Q8TD84 2053 aa4.31□□□□□ -1.72
SUDS3-202ENST00000541280 WNK1Q9H4A3 2382 aa4.3□□□□□ -1.72
SUDS3-202ENST00000541280 TRAV3A0A0B4J244 114 aa4.3□□□□□ -1.72
SUDS3-202ENST00000541280 TEX13DA0A0J9YY54 714 aaPredicted RBP4.3□□□□□ -1.72
SUDS3-202ENST00000541280 A0A1B0GW64 132 aa4.3□□□□□ -1.72
SUDS3-202ENST00000541280 ZNF320A2RRD8 509 aa4.3□□□□□ -1.72
SUDS3-202ENST00000541280 C2orf70A6NJV1 201 aa4.3□□□□□ -1.72
SUDS3-202ENST00000541280 C15orf61A6NNL5 157 aa4.3□□□□□ -1.72
SUDS3-202ENST00000541280 A8MWP6 167 aa4.3□□□□□ -1.72
SUDS3-202ENST00000541280 H3BMQ9 156 aa4.3□□□□□ -1.72
SUDS3-202ENST00000541280 NDUFA4O00483 81 aa4.3□□□□□ -1.72
SUDS3-202ENST00000541280 NUPL2O15504 423 aaKnown RBP4.3□□□□□ -1.72
SUDS3-202ENST00000541280 CDS2O95674 445 aa4.3□□□□□ -1.72
SUDS3-202ENST00000541280 C8orf88P0DMB2 117 aa4.3□□□□□ -1.72
SUDS3-202ENST00000541280 ANXA3P12429 323 aa4.3□□□□□ -1.72
SUDS3-202ENST00000541280 FOLR2P14207 255 aa4.3□□□□□ -1.72
SUDS3-202ENST00000541280 CBLN1P23435 193 aa4.3□□□□□ -1.72
SUDS3-202ENST00000541280 UCP1P25874 307 aa4.3□□□□□ -1.72
SUDS3-202ENST00000541280 BMI1P35226 326 aa4.3□□□□□ -1.72
SUDS3-202ENST00000541280 SNCAP37840 140 aa4.3□□□□□ -1.72
SUDS3-202ENST00000541280 MFAP4P55083 255 aa4.3□□□□□ -1.72
SUDS3-202ENST00000541280 PRCDQ00LT1 54 aa4.3□□□□□ -1.72
SUDS3-202ENST00000541280 WT1-ASQ06250 92 aa4.3□□□□□ -1.72
SUDS3-202ENST00000541280 TRIM16LQ309B1 348 aa4.3□□□□□ -1.72
SUDS3-202ENST00000541280 DEFB114Q30KQ6 69 aa4.3□□□□□ -1.72
SUDS3-202ENST00000541280 SCGB2B2Q4G0G5 96 aa4.3□□□□□ -1.72
SUDS3-202ENST00000541280 ZNF57Q68EA5 555 aaPredicted RBP4.3□□□□□ -1.72
SUDS3-202ENST00000541280 SLC16A13Q7RTY0 426 aa4.3□□□□□ -1.72
SUDS3-202ENST00000541280 MCFD2Q8NI22 146 aa4.3□□□□□ -1.72
SUDS3-202ENST00000541280 ZNF502Q8TBZ5 544 aa4.3□□□□□ -1.72
SUDS3-202ENST00000541280 IL22RA2Q969J5 263 aa4.3□□□□□ -1.72
SUDS3-202ENST00000541280 ISOC1Q96CN7 298 aa4.3□□□□□ -1.72
SUDS3-202ENST00000541280 SOSTQ9BQB4 213 aa4.3□□□□□ -1.72
SUDS3-202ENST00000541280 HINT2Q9BX68 163 aa4.3□□□□□ -1.72
SUDS3-202ENST00000541280 ZNF436Q9C0F3 470 aaPredicted RBP4.3□□□□□ -1.72
SUDS3-202ENST00000541280 SLIRPQ9GZT3 109 aaKnown RBP4.3□□□□□ -1.72
SUDS3-202ENST00000541280 C6orf62Q9GZU0 229 aaPredicted RBP4.3□□□□□ -1.72
SUDS3-202ENST00000541280 NXF2Q9GZY0 626 aaKnown RBP4.3□□□□□ -1.72
SUDS3-202ENST00000541280 MIXL1Q9H2W2 232 aa4.3□□□□□ -1.72
SUDS3-202ENST00000541280 TUBA4BQ9H853 241 aa4.3□□□□□ -1.72
SUDS3-202ENST00000541280 PLEKHA3Q9HB20 300 aa4.3□□□□□ -1.72
SUDS3-202ENST00000541280 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.3□□□□□ -1.72
SUDS3-202ENST00000541280 NDUFA13Q9P0J0 144 aa4.3□□□□□ -1.72
SUDS3-202ENST00000541280 GPR132Q9UNW8 380 aa4.3□□□□□ -1.72
SUDS3-202ENST00000541280 TRAV30A0A087WSZ9 112 aa4.29□□□□□ -1.72
SUDS3-202ENST00000541280 ANKRD20A5PA0PJZ0 165 aa4.29□□□□□ -1.72
SUDS3-202ENST00000541280 CCDC160A6NGH7 325 aa4.29□□□□□ -1.72
SUDS3-202ENST00000541280 C15orf62A8K5M9 175 aa4.29□□□□□ -1.72
SUDS3-202ENST00000541280 PPP5D1E7EU14 171 aa4.29□□□□□ -1.72
SUDS3-202ENST00000541280 C3orf84H3BNL1 204 aa4.29□□□□□ -1.72
SUDS3-202ENST00000541280 TGOLN2O43493 480 aa4.29□□□□□ -1.72
SUDS3-202ENST00000541280 IFNA17P01571 189 aa4.29□□□□□ -1.72
SUDS3-202ENST00000541280 TRBV12-3P01733 135 aa4.29□□□□□ -1.72
SUDS3-202ENST00000541280 HLA-AP01891 365 aaKnown RBP4.29□□□□□ -1.72
SUDS3-202ENST00000541280 REG1AP05451 166 aa4.29□□□□□ -1.72
SUDS3-202ENST00000541280 CFC1BP0CG36 223 aa4.29□□□□□ -1.72
SUDS3-202ENST00000541280 CFC1P0CG37 223 aa4.29□□□□□ -1.72
SUDS3-202ENST00000541280 NPBWR1P48145 328 aa4.29□□□□□ -1.72
SUDS3-202ENST00000541280 AKR1C2P52895 323 aa4.29□□□□□ -1.72
SUDS3-202ENST00000541280 ATP5IP56385 69 aaPredicted RBP4.29□□□□□ -1.72
SUDS3-202ENST00000541280 KRTAP10-12P60413 245 aa4.29□□□□□ -1.72
SUDS3-202ENST00000541280 SPCS3P61009 180 aa4.29□□□□□ -1.72
SUDS3-202ENST00000541280 SRPXP78539 464 aa4.29□□□□□ -1.72
SUDS3-202ENST00000541280 AARDQ4LEZ3 155 aa4.29□□□□□ -1.72
SUDS3-202ENST00000541280 RBPMS2Q6ZRY4 209 aaKnown RBP4.29□□□□□ -1.72
SUDS3-202ENST00000541280 UXS1Q8NBZ7 420 aa4.29□□□□□ -1.72
SUDS3-202ENST00000541280 DUSP18Q8NEJ0 188 aa4.29□□□□□ -1.72
SUDS3-202ENST00000541280 OR10W1Q8NGF6 305 aa4.29□□□□□ -1.72
SUDS3-202ENST00000541280 OR13C8Q8NGS7 320 aa4.29□□□□□ -1.72
SUDS3-202ENST00000541280 RNASE11Q8TAA1 199 aaKnown RBP4.29□□□□□ -1.72
SUDS3-202ENST00000541280 RBPMSQ93062 196 aaKnown RBP4.29□□□□□ -1.72
SUDS3-202ENST00000541280 MRGPRFQ96AM1 343 aa4.29□□□□□ -1.72
SUDS3-202ENST00000541280 GALNT14Q96FL9 552 aa4.29□□□□□ -1.72
SUDS3-202ENST00000541280 SLC25A21Q9BQT8 299 aaPredicted RBP4.29□□□□□ -1.72
SUDS3-202ENST00000541280 TMEM222Q9H0R3 208 aa4.29□□□□□ -1.72
SUDS3-202ENST00000541280 C5orf66Q9H5L9 145 aa4.29□□□□□ -1.72
SUDS3-202ENST00000541280 NAA60Q9H7X0 242 aa4.29□□□□□ -1.72
SUDS3-202ENST00000541280 ZC4H2Q9NQZ6 224 aa4.29□□□□□ -1.72
SUDS3-202ENST00000541280 NSG2Q9Y328 171 aa4.29□□□□□ -1.72
SUDS3-202ENST00000541280 CEPT1Q9Y6K0 416 aa4.29□□□□□ -1.72
SUDS3-202ENST00000541280 TMEM56-RWDD3S4R434 201 aa4.29□□□□□ -1.72
SUDS3-202ENST00000541280 A0A1W2PS18 150 aa4.28□□□□□ -1.72
SUDS3-202ENST00000541280 MFSD2BA6NFX1 497 aa4.28□□□□□ -1.72
SUDS3-202ENST00000541280 CRYM-AS1A6NIL9 109 aa4.28□□□□□ -1.72
SUDS3-202ENST00000541280 IGKV1-39P01597 117 aa4.28□□□□□ -1.72
SUDS3-202ENST00000541280 IGKV1D-39P04432 117 aa4.28□□□□□ -1.72
SUDS3-202ENST00000541280 FRMD6-AS1P0C7T7 363 aa4.28□□□□□ -1.72
SUDS3-202ENST00000541280 GPR183P32249 361 aa4.28□□□□□ -1.72
SUDS3-202ENST00000541280 HTR2BP41595 481 aa4.28□□□□□ -1.72
SUDS3-202ENST00000541280 CNPY1Q3B7I2 92 aa4.28□□□□□ -1.72
SUDS3-202ENST00000541280 Q56UQ5 140 aa4.28□□□□□ -1.72
SUDS3-202ENST00000541280 SPANXN2Q5MJ10 180 aa4.28□□□□□ -1.72
SUDS3-202ENST00000541280 PAPPA-AS1Q5QFB9 102 aa4.28□□□□□ -1.72
SUDS3-202ENST00000541280 PVRIGQ6DKI7 326 aa4.28□□□□□ -1.72
SUDS3-202ENST00000541280 ETFRF1Q6IPR1 90 aa4.28□□□□□ -1.72
SUDS3-202ENST00000541280 TOMM5Q8N4H5 51 aa4.28□□□□□ -1.72
SUDS3-202ENST00000541280 SLC35G3Q8N808 338 aa4.28□□□□□ -1.72
SUDS3-202ENST00000541280 OR51S1Q8NGJ8 323 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms