RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 GTSCR1Q86UQ5 136 aa3.46□□□□□ -1.86
PRKDC-209ENST00000540819 TMEM105Q8N8V8 129 aa3.46□□□□□ -1.86
PRKDC-209ENST00000540819 AP1S3Q96PC3 154 aa3.46□□□□□ -1.86
PRKDC-209ENST00000540819 PLA2G2FQ9BZM2 168 aa3.46□□□□□ -1.86
PRKDC-209ENST00000540819 SMDT1Q9H4I9 107 aa3.46□□□□□ -1.86
PRKDC-209ENST00000540819 MYH7P12883 1935 aa3.46□□□□□ -1.86
PRKDC-209ENST00000540819 THADAQ6YHU6 1953 aa3.45□□□□□ -1.86
PRKDC-209ENST00000540819 MEGF6O75095 1541 aa3.45□□□□□ -1.86
PRKDC-209ENST00000540819 IGKV1-9A0A0C4DH69 117 aa3.45□□□□□ -1.86
PRKDC-209ENST00000540819 LOC107984640A0A0U1RRK4 108 aa3.45□□□□□ -1.86
PRKDC-209ENST00000540819 C9orf170A2RU37 121 aa3.45□□□□□ -1.86
PRKDC-209ENST00000540819 LY6LH3BQJ8 138 aa3.45□□□□□ -1.86
PRKDC-209ENST00000540819 GNG7O60262 68 aa3.45□□□□□ -1.86
PRKDC-209ENST00000540819 IGHV3-7P01780 117 aa3.45□□□□□ -1.86
PRKDC-209ENST00000540819 IGLV7-43P04211 117 aa3.45□□□□□ -1.86
PRKDC-209ENST00000540819 PAEPP09466 180 aa3.45□□□□□ -1.86
PRKDC-209ENST00000540819 FUT5Q11128 374 aa3.45□□□□□ -1.86
PRKDC-209ENST00000540819 RNASE10Q5GAN6 216 aaKnown RBP3.45□□□□□ -1.86
PRKDC-209ENST00000540819 AMMECR1LQ6DCA0 310 aa3.45□□□□□ -1.86
PRKDC-209ENST00000540819 PHF5AQ7RTV0 110 aaKnown RBP3.45□□□□□ -1.86
PRKDC-209ENST00000540819 HIST3H2BBQ8N257 126 aa3.45□□□□□ -1.86
PRKDC-209ENST00000540819 UBALD1Q8TB05 177 aa3.45□□□□□ -1.86
PRKDC-209ENST00000540819 WFDC5Q8TCV5 224 aa3.45□□□□□ -1.86
PRKDC-209ENST00000540819 SMCR5Q8TEV8 140 aa3.45□□□□□ -1.86
PRKDC-209ENST00000540819 MAGOHBQ96A72 148 aaKnown RBP3.45□□□□□ -1.86
PRKDC-209ENST00000540819 MRPL32Q9BYC8 188 aaKnown RBP3.45□□□□□ -1.86
PRKDC-209ENST00000540819 TTTY13Q9BZ97 58 aa3.45□□□□□ -1.86
PRKDC-209ENST00000540819 OSTCQ9NRP0 149 aa3.45□□□□□ -1.86
PRKDC-209ENST00000540819 GNG8Q9UK08 70 aa3.45□□□□□ -1.86
PRKDC-209ENST00000540819 RNF11Q9Y3C5 154 aa3.45□□□□□ -1.86
PRKDC-209ENST00000540819 UHRF1BP1LA0JNW5 1464 aa3.45□□□□□ -1.86
PRKDC-209ENST00000540819 DISP2A7MBM2 1401 aa3.44□□□□□ -1.86
PRKDC-209ENST00000540819 CNTLNQ9NXG0 1405 aa3.44□□□□□ -1.86
PRKDC-209ENST00000540819 IBTKQ9P2D0 1353 aaPredicted RBP3.44□□□□□ -1.86
PRKDC-209ENST00000540819 IGLV4-69A0A075B6H9 119 aa3.44□□□□□ -1.86
PRKDC-209ENST00000540819 IGKV6D-41A0A0C4DH26 115 aa3.44□□□□□ -1.86
PRKDC-209ENST00000540819 MEIS3P1A6NDR6 274 aa3.44□□□□□ -1.86
PRKDC-209ENST00000540819 UBFD1O14562 309 aaKnown RBP3.44□□□□□ -1.86
PRKDC-209ENST00000540819 SOD1P00441 154 aa3.44□□□□□ -1.86
PRKDC-209ENST00000540819 CCL5P13501 91 aa3.44□□□□□ -1.86
PRKDC-209ENST00000540819 TMBIM6P55061 237 aa3.44□□□□□ -1.86
PRKDC-209ENST00000540819 ZNF816Q0VGE8 651 aaPredicted RBP3.44□□□□□ -1.86
PRKDC-209ENST00000540819 TAF9Q16594 264 aa3.44□□□□□ -1.86
PRKDC-209ENST00000540819 MIAQ16674 131 aa3.44□□□□□ -1.86
PRKDC-209ENST00000540819 LDLRAD2Q5SZI1 272 aa3.44□□□□□ -1.86
PRKDC-209ENST00000540819 TMEM14EPQ6UXP3 125 aa3.44□□□□□ -1.86
PRKDC-209ENST00000540819 ZNF705AQ6ZN79 300 aaPredicted RBP3.44□□□□□ -1.86
PRKDC-209ENST00000540819 MIR17HGQ75NE6 70 aa3.44□□□□□ -1.86
PRKDC-209ENST00000540819 LINC00305Q7Z4B0 112 aa3.44□□□□□ -1.86
PRKDC-209ENST00000540819 DEFB128Q7Z7B8 93 aa3.44□□□□□ -1.86
PRKDC-209ENST00000540819 OR4S1Q8NGB4 309 aa3.44□□□□□ -1.86
PRKDC-209ENST00000540819 MUC7Q8TAX7 377 aa3.44□□□□□ -1.86
PRKDC-209ENST00000540819 PCM1Q15154 2024 aa3.44□□□□□ -1.86
PRKDC-209ENST00000540819 TOPBP1Q92547 1522 aa3.44□□□□□ -1.86
PRKDC-209ENST00000540819 KDM5BQ9UGL1 1544 aa3.44□□□□□ -1.86
PRKDC-209ENST00000540819 PIK3C2AO00443 1686 aa3.43□□□□□ -1.86
PRKDC-209ENST00000540819 IGKV1D-37A0A075B6S9 117 aa3.43□□□□□ -1.86
PRKDC-209ENST00000540819 IGHV3-73A0A0B4J1V6 119 aa3.43□□□□□ -1.86
PRKDC-209ENST00000540819 C19orf71A6NCJ1 209 aa3.43□□□□□ -1.86
PRKDC-209ENST00000540819 NAPSAO96009 420 aa3.43□□□□□ -1.86
PRKDC-209ENST00000540819 GPX1P07203 203 aa3.43□□□□□ -1.86
PRKDC-209ENST00000540819 FABP2P12104 132 aa3.43□□□□□ -1.86
PRKDC-209ENST00000540819 RNASE4P34096 147 aaKnown RBP3.43□□□□□ -1.86
PRKDC-209ENST00000540819 DYNLT3P51808 116 aa3.43□□□□□ -1.86
PRKDC-209ENST00000540819 ZNF141Q15928 474 aa3.43□□□□□ -1.86
PRKDC-209ENST00000540819 LPAL2Q16609 132 aa3.43□□□□□ -1.86
PRKDC-209ENST00000540819 TMEM69Q5SWH9 247 aa3.43□□□□□ -1.86
PRKDC-209ENST00000540819 TMEM244Q5VVB8 128 aa3.43□□□□□ -1.86
PRKDC-209ENST00000540819 C22orf39Q6P5X5 142 aa3.43□□□□□ -1.86
PRKDC-209ENST00000540819 BPIFA4PQ86YQ2 179 aa3.43□□□□□ -1.86
PRKDC-209ENST00000540819 PDZD9Q8IXQ8 264 aa3.43□□□□□ -1.86
PRKDC-209ENST00000540819 APCDD1LQ8NCL9 501 aa3.43□□□□□ -1.86
PRKDC-209ENST00000540819 SCGB3A1Q96QR1 104 aa3.43□□□□□ -1.86
PRKDC-209ENST00000540819 HIST1H2BLQ99880 126 aa3.43□□□□□ -1.86
PRKDC-209ENST00000540819 CBLN4Q9NTU7 201 aa3.43□□□□□ -1.86
PRKDC-209ENST00000540819 MRPL16Q9NX20 251 aaKnown RBP3.43□□□□□ -1.86
PRKDC-209ENST00000540819 BAIAP2Q9UQB8 552 aa3.43□□□□□ -1.86
PRKDC-209ENST00000540819 FGD6Q6ZV73 1430 aa3.43□□□□□ -1.86
PRKDC-209ENST00000540819 TRGV10A0A0A0MS01 117 aa3.42□□□□□ -1.86
PRKDC-209ENST00000540819 ODAMA1E959 279 aa3.42□□□□□ -1.86
PRKDC-209ENST00000540819 H3BQ85 93 aa3.42□□□□□ -1.86
PRKDC-209ENST00000540819 TXNDC9O14530 226 aa3.42□□□□□ -1.86
PRKDC-209ENST00000540819 NCR2O95944 276 aa3.42□□□□□ -1.86
PRKDC-209ENST00000540819 IGHV3-53P01767 116 aa3.42□□□□□ -1.86
PRKDC-209ENST00000540819 MT-ND4LP03901 98 aa3.42□□□□□ -1.86
PRKDC-209ENST00000540819 IGKV1-16P04430 117 aa3.42□□□□□ -1.86
PRKDC-209ENST00000540819 CXCL1P09341 107 aa3.42□□□□□ -1.86
PRKDC-209ENST00000540819 METTL15P1P0C7V9 234 aa3.42□□□□□ -1.86
PRKDC-209ENST00000540819 RPL22P35268 128 aaKnown RBP3.42□□□□□ -1.86
PRKDC-209ENST00000540819 RPL35P42766 123 aaKnown RBP3.42□□□□□ -1.86
PRKDC-209ENST00000540819 AQP4P55087 323 aa3.42□□□□□ -1.86
PRKDC-209ENST00000540819 COPZ1P61923 177 aa3.42□□□□□ -1.86
PRKDC-209ENST00000540819 HBBP68871 147 aa3.42□□□□□ -1.86
PRKDC-209ENST00000540819 MRPS10P82664 201 aaKnown RBP3.42□□□□□ -1.86
PRKDC-209ENST00000540819 RHOGP84095 191 aa3.42□□□□□ -1.86
PRKDC-209ENST00000540819 ZNF79Q15937 498 aa3.42□□□□□ -1.86
PRKDC-209ENST00000540819 SAXO1Q8IYX7 474 aa3.42□□□□□ -1.86
PRKDC-209ENST00000540819 MMGT1Q8N4V1 131 aa3.42□□□□□ -1.86
PRKDC-209ENST00000540819 ST20-AS1Q8NBB2 130 aa3.42□□□□□ -1.86
PRKDC-209ENST00000540819 ZC2HC1AQ96GY0 325 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms