RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 ZNF257Q9Y2Q1 563 aa7.18□□□□□ -1.26
DDB1-217ENST00000540166 PPIAL4CA0A0B4J2A2 164 aa7.17□□□□□ -1.26
DDB1-217ENST00000540166 TMEM238LA0A1B0GVL6 79 aa7.17□□□□□ -1.26
DDB1-217ENST00000540166 PPIAL4GP0DN37 164 aa7.17□□□□□ -1.26
DDB1-217ENST00000540166 UBE2L3P68036 154 aaKnown RBP7.17□□□□□ -1.26
DDB1-217ENST00000540166 ZBTB34Q8NCN2 500 aa7.17□□□□□ -1.26
DDB1-217ENST00000540166 OR8A1Q8NGG7 326 aa7.17□□□□□ -1.26
DDB1-217ENST00000540166 ZC2HC1AQ96GY0 325 aa7.17□□□□□ -1.26
DDB1-217ENST00000540166 MS4A6AQ9H2W1 248 aa7.17□□□□□ -1.26
DDB1-217ENST00000540166 CENPEQ02224 2701 aa7.17□□□□□ -1.26
DDB1-217ENST00000540166 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.17□□□□□ -1.26
DDB1-217ENST00000540166 G3V4G9 280 aa7.17□□□□□ -1.26
DDB1-217ENST00000540166 FCER1GP30273 86 aa7.17□□□□□ -1.26
DDB1-217ENST00000540166 GPR12P47775 334 aa7.17□□□□□ -1.26
DDB1-217ENST00000540166 NMUP48645 174 aa7.17□□□□□ -1.26
DDB1-217ENST00000540166 RAB9AP51151 201 aa7.17□□□□□ -1.26
DDB1-217ENST00000540166 HSD52Q0P140 79 aa7.17□□□□□ -1.26
DDB1-217ENST00000540166 EBLN2Q6P2I7 272 aa7.17□□□□□ -1.26
DDB1-217ENST00000540166 VSTM2AQ8TAG5 236 aa7.17□□□□□ -1.26
DDB1-217ENST00000540166 FAM216AQ8WUB2 273 aa7.17□□□□□ -1.26
DDB1-217ENST00000540166 TPPP3Q9BW30 176 aa7.17□□□□□ -1.26
DDB1-217ENST00000540166 LY96Q9Y6Y9 160 aa7.17□□□□□ -1.26
DDB1-217ENST00000540166 V9GYV3 84 aa7.17□□□□□ -1.26
DDB1-217ENST00000540166 IGKV1-6A0A0C4DH72 117 aa7.17□□□□□ -1.26
DDB1-217ENST00000540166 GCSHP23434 173 aa7.17□□□□□ -1.26
DDB1-217ENST00000540166 ASCL4Q6XD76 172 aa7.17□□□□□ -1.26
DDB1-217ENST00000540166 Q6ZS49 121 aa7.17□□□□□ -1.26
DDB1-217ENST00000540166 Q71RC1 249 aaPredicted RBP7.17□□□□□ -1.26
DDB1-217ENST00000540166 BHLHA15Q7RTS1 189 aaPredicted RBP7.17□□□□□ -1.26
DDB1-217ENST00000540166 TNFRSF19Q9NS68 423 aa7.17□□□□□ -1.26
DDB1-217ENST00000540166 J3QR06 171 aa7.16□□□□□ -1.26
DDB1-217ENST00000540166 RRHO14718 337 aa7.16□□□□□ -1.26
DDB1-217ENST00000540166 IGKV1-39P01597 117 aa7.16□□□□□ -1.26
DDB1-217ENST00000540166 IGKV1D-39P04432 117 aa7.16□□□□□ -1.26
DDB1-217ENST00000540166 SRSF7Q16629 238 aaKnown RBP eCLIP7.16□□□□□ -1.26
DDB1-217ENST00000540166 CEACAM21Q3KPI0 293 aa7.16□□□□□ -1.26
DDB1-217ENST00000540166 TUSC5Q8IXB3 177 aa7.16□□□□□ -1.26
DDB1-217ENST00000540166 COMMD5Q9GZQ3 224 aa7.16□□□□□ -1.26
DDB1-217ENST00000540166 OBP2BQ9NPH6 170 aa7.16□□□□□ -1.26
DDB1-217ENST00000540166 GATA2P23769 480 aaPredicted RBP7.16□□□□□ -1.26
DDB1-217ENST00000540166 LINC00596Q86U02 117 aa7.16□□□□□ -1.26
DDB1-217ENST00000540166 STPG3Q8N7X2 389 aa7.16□□□□□ -1.26
DDB1-217ENST00000540166 MCRIP2Q9BUT9 160 aaKnown RBP7.16□□□□□ -1.26
DDB1-217ENST00000540166 MS4A5Q9H3V2 200 aa7.16□□□□□ -1.26
DDB1-217ENST00000540166 PSG11Q9UQ72 335 aa7.16□□□□□ -1.26
DDB1-217ENST00000540166 POLDIP2Q9Y2S7 368 aa7.16□□□□□ -1.26
DDB1-217ENST00000540166 DMXL2Q8TDJ6 3036 aa7.16□□□□□ -1.26
DDB1-217ENST00000540166 SONP18583 2426 aaKnown RBP7.16□□□□□ -1.26
DDB1-217ENST00000540166 C3orf80F5H4A9 247 aa7.16□□□□□ -1.26
DDB1-217ENST00000540166 H0YJW9 148 aa7.16□□□□□ -1.26
DDB1-217ENST00000540166 K7EN84 100 aa7.16□□□□□ -1.26
DDB1-217ENST00000540166 IGLV3-1P01715 115 aa7.16□□□□□ -1.26
DDB1-217ENST00000540166 SLAQ13239 276 aa7.16□□□□□ -1.26
DDB1-217ENST00000540166 RFESDQ8TAC1 157 aa7.16□□□□□ -1.26
DDB1-217ENST00000540166 ZNF48Q96MX3 618 aaPredicted RBP7.16□□□□□ -1.26
DDB1-217ENST00000540166 PRRC2AP48634 2157 aaKnown RBP7.16□□□□□ -1.26
DDB1-217ENST00000540166 FREM1Q5H8C1 2179 aa7.16□□□□□ -1.26
DDB1-217ENST00000540166 TMEM30CPA0ZSE6 113 aa7.15□□□□□ -1.26
DDB1-217ENST00000540166 DEFB108AA8MXU0 73 aa7.15□□□□□ -1.26
DDB1-217ENST00000540166 SPINT2O43291 252 aa7.15□□□□□ -1.26
DDB1-217ENST00000540166 SMIM13P0DJ93 91 aa7.15□□□□□ -1.26
DDB1-217ENST00000540166 ZNF585BQ52M93 769 aa7.15□□□□□ -1.26
DDB1-217ENST00000540166 LHFPL4Q7Z7J7 247 aa7.15□□□□□ -1.26
DDB1-217ENST00000540166 ZNF645Q8N7E2 425 aa7.15□□□□□ -1.26
DDB1-217ENST00000540166 OR4F17Q8NGA8 305 aa7.15□□□□□ -1.26
DDB1-217ENST00000540166 GP6Q9HCN6 339 aa7.15□□□□□ -1.26
DDB1-217ENST00000540166 A0A1W2PRE2 83 aa7.15□□□□□ -1.26
DDB1-217ENST00000540166 C9orf118A6NHY6 69 aa7.15□□□□□ -1.26
DDB1-217ENST00000540166 K7EP34 96 aa7.15□□□□□ -1.26
DDB1-217ENST00000540166 DNPH1O43598 174 aa7.15□□□□□ -1.26
DDB1-217ENST00000540166 KIR3DS1Q14943 382 aa7.15□□□□□ -1.26
DDB1-217ENST00000540166 TM4SF20Q53R12 229 aa7.15□□□□□ -1.26
DDB1-217ENST00000540166 CRIP3Q6Q6R5 217 aa7.15□□□□□ -1.26
DDB1-217ENST00000540166 ABHD12Q8N2K0 398 aa7.15□□□□□ -1.26
DDB1-217ENST00000540166 Q8N976 141 aa7.15□□□□□ -1.26
DDB1-217ENST00000540166 HS3ST6Q96QI5 342 aa7.15□□□□□ -1.26
DDB1-217ENST00000540166 RTL8AQ9BWD3 113 aa7.15□□□□□ -1.26
DDB1-217ENST00000540166 PRDM14Q9GZV8 571 aa7.15□□□□□ -1.26
DDB1-217ENST00000540166 YAE1D1Q9NRH1 226 aa7.15□□□□□ -1.26
DDB1-217ENST00000540166 F11RQ9Y624 299 aaKnown RBP7.15□□□□□ -1.26
DDB1-217ENST00000540166 IGHV3-43A0A0B4J1X8 118 aa7.15□□□□□ -1.27
DDB1-217ENST00000540166 SH2D7A6NKC9 451 aaPredicted RBP7.15□□□□□ -1.27
DDB1-217ENST00000540166 HIGD1CA8MV81 97 aa7.15□□□□□ -1.27
DDB1-217ENST00000540166 C19orf84I3L1E1 186 aa7.15□□□□□ -1.27
DDB1-217ENST00000540166 IGHV3-43DP0DP04 118 aa7.15□□□□□ -1.27
DDB1-217ENST00000540166 HBBP68871 147 aa7.15□□□□□ -1.27
DDB1-217ENST00000540166 PSG7Q13046 419 aa7.15□□□□□ -1.27
DDB1-217ENST00000540166 C20orf204Q6ZNR8 217 aa7.15□□□□□ -1.27
DDB1-217ENST00000540166 MBD3L4A6NDZ8 208 aaPredicted RBP7.14□□□□□ -1.27
DDB1-217ENST00000540166 MBD3L3A6NE82 208 aaPredicted RBP7.14□□□□□ -1.27
DDB1-217ENST00000540166 MBD3L5A6NJ08 208 aaPredicted RBP7.14□□□□□ -1.27
DDB1-217ENST00000540166 A8MWL6 223 aa7.14□□□□□ -1.27
DDB1-217ENST00000540166 J3QW42 95 aa7.14□□□□□ -1.27
DDB1-217ENST00000540166 FOXF2Q12947 444 aa7.14□□□□□ -1.27
DDB1-217ENST00000540166 EFNB3Q15768 340 aa7.14□□□□□ -1.27
DDB1-217ENST00000540166 PRR31Q5SQ13 230 aa7.14□□□□□ -1.27
DDB1-217ENST00000540166 CXorf67Q86X51 503 aaPredicted RBP7.14□□□□□ -1.27
DDB1-217ENST00000540166 MBD3L2Q8NHZ7 208 aaPredicted RBP7.14□□□□□ -1.27
DDB1-217ENST00000540166 S1PR3Q99500 378 aa7.14□□□□□ -1.27
DDB1-217ENST00000540166 FAM215AQ9Y5M1 114 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms