RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 BEND2Q8NDZ0 799 aa5.39□□□□□ -1.55
LSAMP-207ENST00000539563 CHCHD1Q96BP2 118 aaKnown RBP5.39□□□□□ -1.55
LSAMP-207ENST00000539563 TPRP12270 2363 aaKnown RBP5.39□□□□□ -1.55
LSAMP-207ENST00000539563 TMEM50AO95807 157 aa5.38□□□□□ -1.55
LSAMP-207ENST00000539563 EMP1P54849 157 aa5.38□□□□□ -1.55
LSAMP-207ENST00000539563 EFNB3Q15768 340 aa5.38□□□□□ -1.55
LSAMP-207ENST00000539563 CFAP161Q6P656 301 aa5.38□□□□□ -1.55
LSAMP-207ENST00000539563 C20orf204Q6ZNR8 217 aa5.38□□□□□ -1.55
LSAMP-207ENST00000539563 NUDT11Q96G61 164 aa5.38□□□□□ -1.55
LSAMP-207ENST00000539563 RNF5Q99942 180 aa5.38□□□□□ -1.55
LSAMP-207ENST00000539563 DEPPQ9NTK1 212 aa5.38□□□□□ -1.55
LSAMP-207ENST00000539563 PSG8Q9UQ74 426 aa5.38□□□□□ -1.55
LSAMP-207ENST00000539563 TRBV7-1A0A0A6YYK4 115 aa5.38□□□□□ -1.55
LSAMP-207ENST00000539563 PINLYPA6NC86 204 aa5.38□□□□□ -1.55
LSAMP-207ENST00000539563 SLC25A20O43772 301 aa5.38□□□□□ -1.55
LSAMP-207ENST00000539563 CD55P08174 381 aa5.38□□□□□ -1.55
LSAMP-207ENST00000539563 CDKN1AP38936 164 aa5.38□□□□□ -1.55
LSAMP-207ENST00000539563 FAM71F2Q6NXP2 309 aa5.38□□□□□ -1.55
LSAMP-207ENST00000539563 TMEM170AQ8WVE7 144 aa5.38□□□□□ -1.55
LSAMP-207ENST00000539563 DTX1Q86Y01 620 aa5.38□□□□□ -1.55
LSAMP-207ENST00000539563 MBNL3Q9NUK0 354 aaKnown RBP5.38□□□□□ -1.55
LSAMP-207ENST00000539563 PLXNB3Q9ULL4 1909 aa5.38□□□□□ -1.55
LSAMP-207ENST00000539563 LINC00614P0C842 121 aa5.38□□□□□ -1.55
LSAMP-207ENST00000539563 BTCP35070 178 aa5.38□□□□□ -1.55
LSAMP-207ENST00000539563 ID3Q02535 119 aa5.38□□□□□ -1.55
LSAMP-207ENST00000539563 ORMDL2Q53FV1 153 aa5.38□□□□□ -1.55
LSAMP-207ENST00000539563 SIGLEC15Q6ZMC9 328 aa5.38□□□□□ -1.55
LSAMP-207ENST00000539563 BEX4Q9NWD9 120 aaPredicted RBP5.38□□□□□ -1.55
LSAMP-207ENST00000539563 TMEM42Q69YG0 159 aa5.38□□□□□ -1.55
LSAMP-207ENST00000539563 RNASE7Q9H1E1 156 aaKnown RBP5.38□□□□□ -1.55
LSAMP-207ENST00000539563 TMEM131Q92545 1883 aa5.38□□□□□ -1.55
LSAMP-207ENST00000539563 TMEM178BH3BS89 294 aa5.38□□□□□ -1.55
LSAMP-207ENST00000539563 M0R1W7 72 aa5.38□□□□□ -1.55
LSAMP-207ENST00000539563 MBD3L1Q8WWY6 194 aa5.38□□□□□ -1.55
LSAMP-207ENST00000539563 CHD3Q12873 2000 aaKnown RBP5.38□□□□□ -1.55
LSAMP-207ENST00000539563 DPM2O94777 84 aa5.38□□□□□ -1.55
LSAMP-207ENST00000539563 ADMP35318 185 aa5.38□□□□□ -1.55
LSAMP-207ENST00000539563 PAQR4Q8N4S7 273 aaPredicted RBP5.38□□□□□ -1.55
LSAMP-207ENST00000539563 NEUROG3Q9Y4Z2 214 aa5.38□□□□□ -1.55
LSAMP-207ENST00000539563 SRRM5B3KS81 715 aa5.37□□□□□ -1.55
LSAMP-207ENST00000539563 TSPAN13O95857 204 aa5.37□□□□□ -1.55
LSAMP-207ENST00000539563 ZNF672Q499Z4 452 aaPredicted RBP5.37□□□□□ -1.55
LSAMP-207ENST00000539563 TMEM200BQ69YZ2 307 aa5.37□□□□□ -1.55
LSAMP-207ENST00000539563 SPSB3Q6PJ21 355 aa5.37□□□□□ -1.55
LSAMP-207ENST00000539563 NR2C2APQ86WQ0 139 aa5.37□□□□□ -1.55
LSAMP-207ENST00000539563 IGHV2-26A0A0B4J1V2 119 aa5.37□□□□□ -1.55
LSAMP-207ENST00000539563 TRBV7-9A0A0J9YWB2 115 aa5.37□□□□□ -1.55
LSAMP-207ENST00000539563 A0A1W2PRX2 142 aa5.37□□□□□ -1.55
LSAMP-207ENST00000539563 GATA2P23769 480 aaPredicted RBP5.37□□□□□ -1.55
LSAMP-207ENST00000539563 RASL11AQ6T310 242 aa5.37□□□□□ -1.55
LSAMP-207ENST00000539563 REV3LO60673 3130 aa5.37□□□□□ -1.55
LSAMP-207ENST00000539563 HEPN1Q6WQI6 88 aa5.37□□□□□ -1.55
LSAMP-207ENST00000539563 SLC25A48Q6ZT89 311 aaKnown RBP5.37□□□□□ -1.55
LSAMP-207ENST00000539563 RNF182Q8N6D2 247 aa5.37□□□□□ -1.55
LSAMP-207ENST00000539563 C14orf144Q96I85 54 aa5.37□□□□□ -1.55
LSAMP-207ENST00000539563 SRSF8Q9BRL6 282 aaKnown RBP5.37□□□□□ -1.55
LSAMP-207ENST00000539563 KIAA1671Q9BY89 1806 aa5.37□□□□□ -1.55
LSAMP-207ENST00000539563 TIMM23O14925 209 aa5.37□□□□□ -1.55
LSAMP-207ENST00000539563 ZNF688P0C7X2 276 aa5.37□□□□□ -1.55
LSAMP-207ENST00000539563 NABP1Q96AH0 204 aa5.37□□□□□ -1.55
LSAMP-207ENST00000539563 HBDP02042 147 aa5.37□□□□□ -1.55
LSAMP-207ENST00000539563 TPTE2P1Q5T6R2 138 aa5.37□□□□□ -1.55
LSAMP-207ENST00000539563 TRGV9Q99603 122 aa5.37□□□□□ -1.55
LSAMP-207ENST00000539563 TMEM242Q9NWH2 141 aa5.37□□□□□ -1.55
LSAMP-207ENST00000539563 ZNF319Q9P2F9 582 aa5.37□□□□□ -1.55
LSAMP-207ENST00000539563 CYSLTR1Q9Y271 337 aa5.37□□□□□ -1.55
LSAMP-207ENST00000539563 EFNA4P52798 201 aa5.37□□□□□ -1.55
LSAMP-207ENST00000539563 FGFBP3Q8TAT2 258 aa5.37□□□□□ -1.55
LSAMP-207ENST00000539563 SLC25A15Q9Y619 301 aa5.37□□□□□ -1.55
LSAMP-207ENST00000539563 IGHV3-11P01762 117 aa5.36□□□□□ -1.55
LSAMP-207ENST00000539563 VMO1Q7Z5L0 202 aa5.36□□□□□ -1.55
LSAMP-207ENST00000539563 GLMPQ8WWB7 406 aa5.36□□□□□ -1.55
LSAMP-207ENST00000539563 RPUSD1Q9UJJ7 312 aaKnown RBP5.36□□□□□ -1.55
LSAMP-207ENST00000539563 FAM186AA6NE01 2351 aa5.36□□□□□ -1.55
LSAMP-207ENST00000539563 PGPEP1Q9NXJ5 209 aa5.36□□□□□ -1.55
LSAMP-207ENST00000539563 TOMM7Q9P0U1 55 aa5.36□□□□□ -1.55
LSAMP-207ENST00000539563 GAS1P54826 345 aa5.36□□□□□ -1.55
LSAMP-207ENST00000539563 FOXF2Q12947 444 aa5.36□□□□□ -1.55
LSAMP-207ENST00000539563 ZNF585BQ52M93 769 aa5.36□□□□□ -1.55
LSAMP-207ENST00000539563 KIR3DL3Q8N743 410 aa5.36□□□□□ -1.55
LSAMP-207ENST00000539563 FAM169BQ8N8A8 192 aa5.36□□□□□ -1.55
LSAMP-207ENST00000539563 OR5AN1Q8NGI8 311 aa5.36□□□□□ -1.55
LSAMP-207ENST00000539563 WDR83OSQ9Y284 106 aa5.36□□□□□ -1.55
LSAMP-207ENST00000539563 TRBV6-6A0A0A6YYG2 114 aa5.36□□□□□ -1.55
LSAMP-207ENST00000539563 FNDC10F2Z333 226 aa5.36□□□□□ -1.55
LSAMP-207ENST00000539563 NIT1Q86X76 327 aa5.36□□□□□ -1.55
LSAMP-207ENST00000539563 GNG5P63218 68 aa5.36□□□□□ -1.55
LSAMP-207ENST00000539563 LY6G6FQ5SQ64 297 aa5.36□□□□□ -1.55
LSAMP-207ENST00000539563 TRAV40A0A0B4J280 105 aa5.36□□□□□ -1.55
LSAMP-207ENST00000539563 TRGV4A0A0C4DH28 118 aa5.36□□□□□ -1.55
LSAMP-207ENST00000539563 A0A1B0GW64 132 aa5.36□□□□□ -1.55
LSAMP-207ENST00000539563 APOMO95445 188 aa5.36□□□□□ -1.55
LSAMP-207ENST00000539563 IGHV1-8P0DP01 117 aa5.36□□□□□ -1.55
LSAMP-207ENST00000539563 LHFPL1Q86WI0 220 aa5.36□□□□□ -1.55
LSAMP-207ENST00000539563 TSKUQ8WUA8 353 aa5.36□□□□□ -1.55
LSAMP-207ENST00000539563 VGLL1Q99990 258 aa5.36□□□□□ -1.55
LSAMP-207ENST00000539563 TRAV41A0A0B4J266 112 aa5.36□□□□□ -1.55
LSAMP-207ENST00000539563 TYMSP04818 313 aa5.36□□□□□ -1.55
LSAMP-207ENST00000539563 MUC21Q5SSG8 566 aa5.36□□□□□ -1.55
LSAMP-207ENST00000539563 PRADC1Q9BSG0 188 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms